Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1725
         (636 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.                   31   4.5  
AF245388-1|AAG39036.1| 1001|Homo sapiens GREB1a protein.               31   4.5  
AC011994-1|AAX88907.1| 1949|Homo sapiens unknown protein.              31   4.5  
D13636-1|BAA02800.1|  911|Homo sapiens KIAA0011 protein.               30   6.0  
BT009799-1|AAP88801.1|  911|Homo sapiens general transcription f...    30   6.0  
BC020981-1|AAH20981.1|  911|Homo sapiens general transcription f...    30   6.0  
BC000212-1|AAH00212.1|  585|Homo sapiens GTF3C2 protein protein.       30   6.0  
AC109828-1|AAY24049.1|  534|Homo sapiens unknown protein.              30   6.0  

>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
          Length = 4861

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -1

Query: 270 HPYYLEPLRSSTVRFQRSFLPRTI-RLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLG 94
           H  Y   L  ST    RSFL R   ++ +E+P   FP   +   F +   ++LS    L 
Sbjct: 746 HRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPSSREHHSFLKLCLKLLSNHLALA 805

Query: 93  SAPGIA-EVHGRR 58
            A G+A  + GR+
Sbjct: 806 LAGGVATSILGRQ 818


>AF245388-1|AAG39036.1| 1001|Homo sapiens GREB1a protein.
          Length = 1001

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/72 (26%), Positives = 38/72 (52%)
 Frame = +1

Query: 274 STPMAGGAMVKTR*MASNGFFYLVRYSIDG*KSLRPIWC*VVSDIHRHLLSDAISSSRKL 453
           S+ +A  ++ K   +  +G      Y+++   S+RP    V   +  H+ S A SS++ L
Sbjct: 628 SSSLAASSVTKAASLDVSGTPVCTSYNLEP-HSIRPFQLAVAQKLLSHVCSIADSSTQNL 686

Query: 454 FMISFKKIDYCL 489
            + SF+K+D+ +
Sbjct: 687 DLGSFEKVDFLI 698


>AC011994-1|AAX88907.1| 1949|Homo sapiens unknown protein.
          Length = 1949

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/72 (26%), Positives = 38/72 (52%)
 Frame = +1

Query: 274 STPMAGGAMVKTR*MASNGFFYLVRYSIDG*KSLRPIWC*VVSDIHRHLLSDAISSSRKL 453
           S+ +A  ++ K   +  +G      Y+++   S+RP    V   +  H+ S A SS++ L
Sbjct: 628 SSSLAASSVTKAASLDVSGTPVCTSYNLEP-HSIRPFQLAVAQKLLSHVCSIADSSTQNL 686

Query: 454 FMISFKKIDYCL 489
            + SF+K+D+ +
Sbjct: 687 DLGSFEKVDFLI 698


>D13636-1|BAA02800.1|  911|Homo sapiens KIAA0011 protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -1

Query: 267 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 124
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


>BT009799-1|AAP88801.1|  911|Homo sapiens general transcription
           factor IIIC, polypeptide 2, beta 110kDa protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -1

Query: 267 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 124
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


>BC020981-1|AAH20981.1|  911|Homo sapiens general transcription
           factor IIIC, polypeptide 2, beta 110kDa protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -1

Query: 267 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 124
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


>BC000212-1|AAH00212.1|  585|Homo sapiens GTF3C2 protein protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -1

Query: 267 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 124
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


>AC109828-1|AAY24049.1|  534|Homo sapiens unknown protein.
          Length = 534

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -1

Query: 267 PYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPERYDMSFFKRG-LW 124
           PY  +  +S     QR  LP    L+  N   S T  PER+D+SFF  G LW
Sbjct: 347 PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLW 398


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,337,104
Number of Sequences: 237096
Number of extensions: 2246918
Number of successful extensions: 5326
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5326
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)