Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1725
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1779|AAF48173.1|  341|Drosophila melanogaster CG15729-P...    31   1.7  
AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple...    30   2.3  
AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM ...    30   2.3  
AJ243708-1|CAB57344.3|  963|Drosophila melanogaster prickle pk i...    30   2.3  
AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC...    30   2.3  
AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB...    30   2.3  
AE013599-308|AAM68908.1|  963|Drosophila melanogaster CG11084-PA...    30   2.3  

>AE014298-1779|AAF48173.1|  341|Drosophila melanogaster CG15729-PA
           protein.
          Length = 341

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/55 (40%), Positives = 25/55 (45%)
 Frame = +3

Query: 141 RRTCHSARETPWRGAHSIAGWYVAKKISGNALWMTAVAPGSTDELYSDGGRCDGK 305
           R+  HS R T    A   AG      I G A   TA  P STD + S GG  DG+
Sbjct: 6   RKVNHSLRNTSKSQAQQAAGGDGI--IGGPATGATAATPQSTDTISSAGGFGDGQ 58


>AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple
           isoform protein.
          Length = 1299

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 203 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALL 75
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 416


>AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM
           isoform protein.
          Length = 1029

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 203 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALL 75
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 146


>AJ243708-1|CAB57344.3|  963|Drosophila melanogaster prickle pk
           isoform protein.
          Length = 963

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 203 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALL 75
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 38  PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 80


>AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC,
           isoform C protein.
          Length = 1299

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 203 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALL 75
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 416


>AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB,
           isoform B protein.
          Length = 1029

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 203 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALL 75
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 146


>AE013599-308|AAM68908.1|  963|Drosophila melanogaster CG11084-PA,
           isoform A protein.
          Length = 963

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 203 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALL 75
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 38  PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 80


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,467,759
Number of Sequences: 53049
Number of extensions: 689929
Number of successful extensions: 1802
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1802
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)