Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1723
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.9  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 263 SMLVCRNVNFLNDFSSRTLLRESTFCMFL*FQLYD 367
           S +V   + F   F    LL +ST+C+FL F   D
Sbjct: 269 SEIVDHGIRF--SFKEIGLLVDSTYCLFLLFVFCD 301


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 263 SMLVCRNVNFLNDFSSRTLLRESTFCMFL*FQLYD 367
           S +V   + F   F    LL +ST+C+FL F   D
Sbjct: 269 SEIVDHGIRF--SFKEIGLLVDSTYCLFLLFVFCD 301


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 263 SMLVCRNVNFLNDFSSRTLLRESTFCMFL*FQLYD 367
           S +V   + F   F    LL +ST+C+FL F   D
Sbjct: 269 SEIVDHGIRF--SFKEIGLLVDSTYCLFLLFVFCD 301


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 499 SCIARALKKKPTKFANRARKYKRKPKP 419
           +C+  + K+    F NR  KYK++  P
Sbjct: 152 TCLRLSEKQVKIWFQNRRVKYKKEDLP 178


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 477 KKNQQNSLIGRGNTKENRN 421
           KK Q NSLI    T  NRN
Sbjct: 371 KKQQWNSLIKILKTVSNRN 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,259
Number of Sequences: 336
Number of extensions: 2704
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)