Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1723
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065646-1|BAC05872.1|  322|Homo sapiens seven transmembrane hel...    31   2.3  
AF399512-1|AAK94997.1|  215|Homo sapiens olfactory receptor prot...    30   5.4  
AB065833-1|BAC06052.1|  309|Homo sapiens seven transmembrane hel...    30   5.4  

>AB065646-1|BAC05872.1|  322|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 322

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
 Frame = +3

Query: 297 MISRQELCSESR--HFVCSYDFSCTIFLIIIFFVN*TSLRMSSGFGFLLYFRARLANFVG 470
           MISR + C  ++  HF C       +    ++    T   +S     + +F   L  +V 
Sbjct: 162 MISRLDFCGRNQINHFFCDLPPLMQLSCSRVYITEVTIFILSIAVLCICFFLT-LGPYVF 220

Query: 471 FFFSALAIQLTDNRNHIFDTCQSALAV 551
              S L I  T  R   F TC S LAV
Sbjct: 221 IVSSILRIPSTSGRRKTFSTCGSHLAV 247


>AF399512-1|AAK94997.1|  215|Homo sapiens olfactory receptor
           protein.
          Length = 215

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 414 SSGFGFLLYFRARLANFVGFFFSALAIQLTDNRNHIFDTCQSALA 548
           S+GF  ++     L ++     S L I  T+ R+  F TC S LA
Sbjct: 134 SAGFNIIVTSLTVLVSYTFILSSILGISTTEGRSKAFSTCSSHLA 178


>AB065833-1|BAC06052.1|  309|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 309

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 414 SSGFGFLLYFRARLANFVGFFFSALAIQLTDNRNHIFDTCQSALA 548
           S+GF  ++     L ++     S L I  T+ R+  F TC S LA
Sbjct: 201 SAGFNIIVTSLTVLVSYTFILSSILGISTTEGRSKAFSTCSSHLA 245


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,798,135
Number of Sequences: 237096
Number of extensions: 1548099
Number of successful extensions: 2040
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2039
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)