Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1723
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3918|AAF47241.2|  308|Drosophila melanogaster CG3579-PA...    33   0.30 
AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-P...    25   0.84 
BT004493-1|AAO42657.1|  648|Drosophila melanogaster GH27039p pro...    29   4.8  
AE013599-1629|AAF58429.3|  648|Drosophila melanogaster CG3915-PB...    29   4.8  

>AE013599-3918|AAF47241.2|  308|Drosophila melanogaster CG3579-PA
           protein.
          Length = 308

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = -3

Query: 528 CQIYDSYCQSAVLQEH*KKNQQNSLIGRGNTKENRNRWTFSD 403
           C++++ +C  AV+++   K+   +L+GR  T EN+  W   D
Sbjct: 184 CEVFEEFCNDAVIEDDHAKSLVCNLLGR-KTPENQLTWCHDD 224


>AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-PA
            protein.
          Length = 2762

 Score = 25.4 bits (53), Expect(2) = 0.84
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 354  NHRNIQNVDSLSKVLDEKSFKKFTFLHTNILITG*KGTRES 232
            N+   QNVD +++  D K+ K     H ++  +G    RES
Sbjct: 961  NNNESQNVDDITEKTDLKNEKHLLASHISVTSSGDISIRES 1001



 Score = 24.6 bits (51), Expect(2) = 0.84
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 474 KNQQNSLIGRGNTKENRN 421
           KN +NSL  + N++EN N
Sbjct: 946 KNDKNSLFSKTNSEENNN 963


>BT004493-1|AAO42657.1|  648|Drosophila melanogaster GH27039p
           protein.
          Length = 648

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +1

Query: 94  PTRGKMGLGFIVNVY**VRAPPRHHVTRLRF 186
           P  G   L   VNV   VRAPPR + TRL F
Sbjct: 124 PCTGNASLQMPVNVNMVVRAPPRFNDTRLHF 154


>AE013599-1629|AAF58429.3|  648|Drosophila melanogaster CG3915-PB,
           isoform B protein.
          Length = 648

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +1

Query: 94  PTRGKMGLGFIVNVY**VRAPPRHHVTRLRF 186
           P  G   L   VNV   VRAPPR + TRL F
Sbjct: 124 PCTGNASLQMPVNVNMVVRAPPRFNDTRLHF 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,145,237
Number of Sequences: 53049
Number of extensions: 464482
Number of successful extensions: 800
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)