Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1716
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF166168-1|AAD49857.1|  679|Caenorhabditis elegans adducin-relat...    53   2e-07
AF166167-1|AAD49856.1|  732|Caenorhabditis elegans adducin-relat...    53   2e-07
AF039043-6|AAP82653.1|  718|Caenorhabditis elegans Adducin prote...    53   2e-07
AF039043-5|AAK70639.1|  732|Caenorhabditis elegans Adducin prote...    53   2e-07
AF039043-4|AAL32219.1|  702|Caenorhabditis elegans Adducin prote...    53   2e-07
AF039043-3|AAM54181.1|  682|Caenorhabditis elegans Adducin prote...    53   2e-07
AF039043-2|AAK70638.1|  679|Caenorhabditis elegans Adducin prote...    53   2e-07
AL117203-9|CAB60420.3|  675|Caenorhabditis elegans Hypothetical ...    31   0.65 
AF016441-3|AAB65909.2|  744|Caenorhabditis elegans Hypothetical ...    31   0.86 
AF077532-1|AAC26268.1|  301|Caenorhabditis elegans Hypothetical ...    28   4.6  
Z83122-2|CAB05599.1|  155|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z67754-1|CAA91751.1|  483|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AF166168-1|AAD49857.1|  679|Caenorhabditis elegans adducin-related
           protein protein.
          Length = 679

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = -1

Query: 524 DHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 369
           D  +L+G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 538 DRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF166167-1|AAD49856.1|  732|Caenorhabditis elegans adducin-related
           protein protein.
          Length = 732

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = -1

Query: 524 DHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 369
           D  +L+G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 538 DRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-6|AAP82653.1|  718|Caenorhabditis elegans Adducin protein
           1, isoform e protein.
          Length = 718

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = -1

Query: 524 DHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 369
           D  +L+G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 538 DRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-5|AAK70639.1|  732|Caenorhabditis elegans Adducin protein
           1, isoform b protein.
          Length = 732

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = -1

Query: 524 DHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 369
           D  +L+G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 538 DRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-4|AAL32219.1|  702|Caenorhabditis elegans Adducin protein
           1, isoform c protein.
          Length = 702

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = -1

Query: 524 DHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 369
           D  +L+G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 538 DRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-3|AAM54181.1|  682|Caenorhabditis elegans Adducin protein
           1, isoform d protein.
          Length = 682

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = -1

Query: 524 DHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 369
           D  +L+G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 538 DRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-2|AAK70638.1|  679|Caenorhabditis elegans Adducin protein
           1, isoform a protein.
          Length = 679

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = -1

Query: 524 DHVVLMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 369
           D  +L+G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 538 DRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AL117203-9|CAB60420.3|  675|Caenorhabditis elegans Hypothetical
           protein Y48C3A.12 protein.
          Length = 675

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 500 PLPSAPHGPPVWVFTASSPTILLASSQVTPSRGGPVP 610
           P PS+P  P +   T S+PTI  ASS +  + G  +P
Sbjct: 412 PQPSSPLLPALITTTTSAPTIAPASSPIINASGSSIP 448


>AF016441-3|AAB65909.2|  744|Caenorhabditis elegans Hypothetical
           protein M03F8.3 protein.
          Length = 744

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 410 DNEIDEYRRDVERKRRGNEYDTDLSESEAIS 318
           D E +E  +D E K R  + DTDLSES + S
Sbjct: 692 DEEKEEAGKDAEEKVREGDSDTDLSESSSSS 722


>AF077532-1|AAC26268.1|  301|Caenorhabditis elegans Hypothetical
           protein F40B1.1 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 209 QPEVVLSDVDTTDFLN-AERAHVDSTRGDHTVNGDHSDAHQSTFS 78
           Q EV L D+D TDF N  E  + +    D T++G    AH    S
Sbjct: 190 QKEVTLQDIDPTDFQNLLEVLYGEPAIDDETIDGILHLAHMYDMS 234


>Z83122-2|CAB05599.1|  155|Caenorhabditis elegans Hypothetical
           protein R11A5.3 protein.
          Length = 155

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 19/51 (37%), Positives = 22/51 (43%)
 Frame = -1

Query: 500 ASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERKRRGNEYD 348
           AS GII+R  + N    SAP    P   I   EI        R RR  E+D
Sbjct: 19  ASDGIIKRPIEGNKKRLSAPIKDKPEHRIAPEEITN-APTTSRLRRAPEFD 68


>Z67754-1|CAA91751.1|  483|Caenorhabditis elegans Hypothetical
           protein C34E11.1 protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +2

Query: 494 SRPLPSAP--HGPPVWVFTASSPTILLASSQVTPSRGG 601
           S P P+AP  +G P+ +F      ++ A+  V PS GG
Sbjct: 327 SAPTPAAPQNNGAPIDLFGKLDAPVVNAAPAVAPSNGG 364


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,894,993
Number of Sequences: 27780
Number of extensions: 235753
Number of successful extensions: 948
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)