Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1715
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0750 + 27763841-27763972,27764311-27764485,27764908-277649...    29   2.7  

>04_04_0750 +
           27763841-27763972,27764311-27764485,27764908-27764998,
           27764999-27765133,27765683-27765742,27765876-27765951,
           27766037-27766174,27766509-27767373,27767763-27767865,
           27768101-27768176,27768329-27768393,27768463-27768493,
           27768618-27768725
          Length = 684

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 664 LRDYCSIEWINILCIYLVFPRLDC 593
           LRDYC +  +N +  Y V+ RLDC
Sbjct: 44  LRDYCRVSRLNKVIGYGVYGRLDC 67


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,654,150
Number of Sequences: 37544
Number of extensions: 266680
Number of successful extensions: 300
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)