Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1711
(371 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX784396-2|CAI19414.1| 4387|Homo sapiens vacuolar protein sortin... 44 2e-04
BX784395-2|CAI19412.1| 4387|Homo sapiens vacuolar protein sortin... 44 2e-04
BX682532-2|CAI23591.1| 4387|Homo sapiens vacuolar protein sortin... 44 2e-04
AL162331-1|CAB82724.1| 2270|Homo sapiens hypothetical protein pr... 44 2e-04
AL109757-2|CAI22116.1| 4387|Homo sapiens vacuolar protein sortin... 44 2e-04
AL031296-2|CAI23164.1| 4387|Homo sapiens vacuolar protein sortin... 44 2e-04
AL031276-2|CAI19223.1| 4387|Homo sapiens vacuolar protein sortin... 44 2e-04
AJ608775-1|CAE75587.1| 4363|Homo sapiens VPS13D-2A protein protein. 44 2e-04
AJ608774-1|CAE75586.1| 4388|Homo sapiens VPS13D-1A protein protein. 44 2e-04
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 38 0.010
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 38 0.010
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 38 0.010
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 38 0.010
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 38 0.010
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 38 0.010
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 38 0.010
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 38 0.010
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 38 0.010
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 38 0.010
AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein. 36 0.042
AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein. 36 0.042
AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein. 36 0.042
AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein. 36 0.042
AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein. 36 0.042
AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein p... 30 2.7
L36463-1|AAB67270.1| 783|Homo sapiens ras interactor protein. 29 3.6
BC014417-1|AAH14417.1| 783|Homo sapiens Ras and Rab interactor ... 29 3.6
AB209445-1|BAD92682.1| 651|Homo sapiens ras inhibitor RIN1 vari... 29 3.6
BC025334-1|AAH25334.1| 319|Homo sapiens chromosome X open readi... 29 6.3
>BX784396-2|CAI19414.1| 4387|Homo sapiens vacuolar protein sorting
13 homolog D (S. cerevisiae) protein.
Length = 4387
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 SSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
S W S ++ IVEN++LKI DVHLR+ED VT FA G+ ++++
Sbjct: 131 SYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180
>BX784395-2|CAI19412.1| 4387|Homo sapiens vacuolar protein sorting
13 homolog D (S. cerevisiae) protein.
Length = 4387
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 SSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
S W S ++ IVEN++LKI DVHLR+ED VT FA G+ ++++
Sbjct: 131 SYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180
>BX682532-2|CAI23591.1| 4387|Homo sapiens vacuolar protein sorting
13 homolog D (S. cerevisiae) protein.
Length = 4387
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 SSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
S W S ++ IVEN++LKI DVHLR+ED VT FA G+ ++++
Sbjct: 131 SYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180
>AL162331-1|CAB82724.1| 2270|Homo sapiens hypothetical protein
protein.
Length = 2270
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 SSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
S W S ++ IVEN++LKI DVHLR+ED VT FA G+ ++++
Sbjct: 131 SYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180
>AL109757-2|CAI22116.1| 4387|Homo sapiens vacuolar protein sorting
13 homolog D (S. cerevisiae) protein.
Length = 4387
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 SSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
S W S ++ IVEN++LKI DVHLR+ED VT FA G+ ++++
Sbjct: 131 SYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180
>AL031296-2|CAI23164.1| 4387|Homo sapiens vacuolar protein sorting
13 homolog D (S. cerevisiae) protein.
Length = 4387
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 SSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
S W S ++ IVEN++LKI DVHLR+ED VT FA G+ ++++
Sbjct: 131 SYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180
>AL031276-2|CAI19223.1| 4387|Homo sapiens vacuolar protein sorting
13 homolog D (S. cerevisiae) protein.
Length = 4387
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 SSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
S W S ++ IVEN++LKI DVHLR+ED VT FA G+ ++++
Sbjct: 131 SYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180
>AJ608775-1|CAE75587.1| 4363|Homo sapiens VPS13D-2A protein protein.
Length = 4363
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 SSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
S W S ++ IVEN++LKI DVHLR+ED VT FA G+ ++++
Sbjct: 131 SYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180
>AJ608774-1|CAE75586.1| 4388|Homo sapiens VPS13D-1A protein protein.
Length = 4388
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 SSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
S W S ++ IVEN++LKI DVHLR+ED VT FA G+ ++++
Sbjct: 131 SYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 SYGTGLLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
++ L+ I++NLQ+KI +H+RYED +T + + G++ Q+L+
Sbjct: 138 TFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLS 183
>AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein.
Length = 3628
Score = 35.9 bits (79), Expect = 0.042
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 59 LLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
L +++N+Q+KI D+H++YED VT R + G+T L+
Sbjct: 186 LATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELS 226
>AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein.
Length = 3585
Score = 35.9 bits (79), Expect = 0.042
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 59 LLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
L +++N+Q+KI D+H++YED VT R + G+T L+
Sbjct: 143 LATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELS 183
>AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein.
Length = 3753
Score = 35.9 bits (79), Expect = 0.042
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 59 LLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
L +++N+Q+KI D+H++YED VT R + G+T L+
Sbjct: 186 LATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELS 226
>AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein.
Length = 3710
Score = 35.9 bits (79), Expect = 0.042
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 59 LLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
L +++N+Q+KI D+H++YED VT R + G+T L+
Sbjct: 143 LATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELS 183
>AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein.
Length = 1463
Score = 35.9 bits (79), Expect = 0.042
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 59 LLANIVENLQLKIIDVHLRYEDTVT-CGRAFACGLTAQSLA 178
L +++N+Q+KI D+H++YED VT R + G+T L+
Sbjct: 210 LATQVIKNVQVKITDIHIKYEDDVTDPKRPLSFGVTLGELS 250
>AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein
protein.
Length = 441
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +2
Query: 173 LAARELRLPAGRNGSSCSPTPRVARTSCWSCSNWRSTGIPSVRRPLCLPNLV*YELTERM 352
+ ARE R G +G SC + WS S R + CL ELTER+
Sbjct: 88 VTAREWRCCPGHSGVSCEEASSASLEPMWSGSTMRRMALRPTAFSGCLNCSKVSELTERL 147
Query: 353 R 355
+
Sbjct: 148 K 148
>L36463-1|AAB67270.1| 783|Homo sapiens ras interactor protein.
Length = 783
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 191 RLPAGRNGSSCSPTPRVARTSCWSCSNWRSTGIPSVR-RPLCLPNL 325
R+PAG +G S P P + C S S+ G+P R P P+L
Sbjct: 296 RVPAG-SGPSLPPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHL 340
>BC014417-1|AAH14417.1| 783|Homo sapiens Ras and Rab interactor 1
protein.
Length = 783
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 191 RLPAGRNGSSCSPTPRVARTSCWSCSNWRSTGIPSVR-RPLCLPNL 325
R+PAG +G S P P + C S S+ G+P R P P+L
Sbjct: 296 RVPAG-SGPSLPPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHL 340
>AB209445-1|BAD92682.1| 651|Homo sapiens ras inhibitor RIN1 variant
protein.
Length = 651
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 191 RLPAGRNGSSCSPTPRVARTSCWSCSNWRSTGIPSVR-RPLCLPNL 325
R+PAG +G S P P + C S S+ G+P R P P+L
Sbjct: 164 RVPAG-SGPSLPPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHL 208
>BC025334-1|AAH25334.1| 319|Homo sapiens chromosome X open reading
frame 38 protein.
Length = 319
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 206 RNGSSCSPTPRVARTSCWSCSNWR 277
R GS CSP R + C C+ W+
Sbjct: 61 RGGSRCSPRARQFQPQCQVCAEWK 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,235,135
Number of Sequences: 237096
Number of extensions: 1046576
Number of successful extensions: 2917
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2917
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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