Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1711
(371 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-P... 63 1e-10
AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA ... 46 1e-05
D86547-1|BAA13109.1| 2064|Drosophila melanogaster still life typ... 29 2.6
AE014296-985|AAF50755.3| 2072|Drosophila melanogaster CG5406-PB,... 29 2.6
BT003292-1|AAO25052.1| 161|Drosophila melanogaster GM02245p pro... 28 3.4
BT024194-1|ABC86256.1| 472|Drosophila melanogaster RE71296p pro... 27 6.0
AY060704-1|AAL28252.1| 572|Drosophila melanogaster GH14591p pro... 27 6.0
AE014298-1654|AAF48071.1| 716|Drosophila melanogaster CG1705-PA... 27 6.0
AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-P... 27 6.0
BT022385-1|AAY54801.1| 124|Drosophila melanogaster IP05263p pro... 27 7.9
>AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-PA
protein.
Length = 3892
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +2
Query: 14 YYAT*YSSWLSYGTGLLANIVENLQLKIIDVHLRYEDTVTCGRAFAC-GLTAQSLAAR 184
YY + Y++WL YGT + NI++N++LKI DVH R+ED V G++ C G+ SL A+
Sbjct: 132 YYFSSYNNWLKYGTNMATNIIDNIELKISDVHFRFEDIVDTGKSKICTGIKIGSLTAQ 189
>AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA
protein.
Length = 3242
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +2
Query: 59 LLANIVENLQLKIIDVHLRYEDTVTCGRAFACGLTAQSL 175
L A IV NLQ++I +VHLRYEDT T G F+ G++ L
Sbjct: 141 LTAQIVNNLQVQITNVHLRYEDTTTTGSPFSFGISLHEL 179
>D86547-1|BAA13109.1| 2064|Drosophila melanogaster still life type 1
protein.
Length = 2064
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 82 FTVEDNRCTPSIRRHSHLRTRFRMRADCAVAGGSRAATASWKK 210
+ ED+ S RR HL + FR+ A+ S A T W++
Sbjct: 17 YRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59
>AE014296-985|AAF50755.3| 2072|Drosophila melanogaster CG5406-PB,
isoform B protein.
Length = 2072
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 82 FTVEDNRCTPSIRRHSHLRTRFRMRADCAVAGGSRAATASWKK 210
+ ED+ S RR HL + FR+ A+ S A T W++
Sbjct: 17 YRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59
>BT003292-1|AAO25052.1| 161|Drosophila melanogaster GM02245p
protein.
Length = 161
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 50 GTGLLANIVENLQLKIIDVHLRYEDTVTCGRAFACGLTAQSLAA 181
GTG + Q + + LR D+VT F CG SLA+
Sbjct: 43 GTGTCTQSMSGYQYLDVKIKLRDPDSVTLTPVFFCGCIHSSLAS 86
>BT024194-1|ABC86256.1| 472|Drosophila melanogaster RE71296p
protein.
Length = 472
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 97 NRCTPSIRRHSHLRT---RFRMRADCAVAGGSRAAT 195
NR TPS RR +HL T R RM C +RA+T
Sbjct: 7 NRRTPSPRRMAHLATIDDRLRMDRRCFTVRLARAST 42
>AY060704-1|AAL28252.1| 572|Drosophila melanogaster GH14591p
protein.
Length = 572
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = -3
Query: 213 PFLPAGSRSSRAASDCAVSPHAKARPQVTVSSYRR---CTSIIFN 88
PFL A SSRAA+ A P A Q+ RR T +IFN
Sbjct: 483 PFLAAAHPSSRAAAAAAAYPFADPNSQLYQQYLRRDDFHTRMIFN 527
>AE014298-1654|AAF48071.1| 716|Drosophila melanogaster CG1705-PA
protein.
Length = 716
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 97 NRCTPSIRRHSHLRT---RFRMRADCAVAGGSRAAT 195
NR TPS RR +HL T R RM C +RA+T
Sbjct: 251 NRRTPSPRRMAHLATIDDRLRMDRRCFTVRLARAST 286
>AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-PA
protein.
Length = 2465
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = -3
Query: 213 PFLPAGSRSSRAASDCAVSPHAKARPQVTVSSYRR---CTSIIFN 88
PFL A SSRAA+ A P A Q+ RR T +IFN
Sbjct: 2376 PFLAAAHPSSRAAAAAAAYPFADPNSQLYQQYLRRDDFHTRMIFN 2420
>BT022385-1|AAY54801.1| 124|Drosophila melanogaster IP05263p
protein.
Length = 124
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 176 AARELRLPAGRNGSSCSPTPRVARTSCWSCSNWRSTG 286
A R R P R + C+P PR + SC + + +G
Sbjct: 23 ATRSCRKPGSRYRTFCTPPPRCSPRSCCTSESCCKSG 59
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,183,694
Number of Sequences: 53049
Number of extensions: 310978
Number of successful extensions: 1033
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -