Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1709
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    29   0.17 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.7  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   4.9  

>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -1

Query: 318 RGLTRGPTTSKNL--LVDVSKHTFRYRAA*FDIIIVLLSNCMNFFKRITNLLMSKLAHRI 145
           RG  +   T K L  ++ +S  T R+RA  FD +   + N     KRIT L++  LA + 
Sbjct: 222 RGPLQAAFTIKELREMLKLSSCTTRWRADDFDHVEESIPNLPRPRKRITELMVKSLAEQA 281

Query: 144 VKN 136
             N
Sbjct: 282 PNN 284


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 182 MRLKKFIQLLNNTIMISNYAAL*RNVC-FETSTNKFLLVVGPLVSPR 319
           ++L   I + NN+   SN+ +L   VC F +   +  +V  P+  P+
Sbjct: 355 VKLNDMISMFNNSFHCSNFISLDEAVCSFSSFMLQAFVVCVPVQRPK 401


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 365  HYCFTAEIGRVMVPTRADSQEVLP 294
            H  F AEIG  +V    DS E+LP
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLP 962


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,736
Number of Sequences: 2352
Number of extensions: 10462
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)