Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1705
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...   181   5e-48
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...   176   1e-46
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   3.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score =  181 bits (440), Expect = 5e-48
 Identities = 86/151 (56%), Positives = 108/151 (71%), Gaps = 3/151 (1%)
 Frame = -3

Query: 665 GENNIVRQSTESSITIPFEQTFRDLSAQGNDPRRND-LTTFNYCGCGWPQHMLVPKGTEA 489
           G N I R STESS+TIPFE+TFR+L A  N P   D L+ FN+CGCGWPQHML+PKGTEA
Sbjct: 536 GTNTITRHSTESSLTIPFERTFRNLDA--NRPTGGDALSEFNFCGCGWPQHMLLPKGTEA 593

Query: 488 GMPFQLFVMLSNYDLDRIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDR-PSSSA 312
           G P  LFVM+SNY  DR++QD     TC +  +FCG+KDK YPDRR+MG+PFDR P    
Sbjct: 594 GYPCHLFVMISNYADDRVEQDTSG--TCSDGDTFCGIKDKLYPDRRSMGYPFDRMPRDGV 651

Query: 311 TSLQDFILPNMGLQDITIQLQN-VTEPNPRN 222
            +LQ F+ PNM +Q++ IQ  N + +P  R+
Sbjct: 652 DTLQQFLTPNMRVQEVVIQFSNRIVKPRNRD 682


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score =  176 bits (429), Expect = 1e-46
 Identities = 84/151 (55%), Positives = 109/151 (72%), Gaps = 3/151 (1%)
 Frame = -3

Query: 665 GENNIVRQSTESSITIPFEQTFRDLSAQGNDPRRND-LTTFNYCGCGWPQHMLVPKGTEA 489
           G+N I R S++SS+TIPFE+TFR+L    N P+  + L  FN+CGCGWPQHML+PKGT  
Sbjct: 537 GQNTITRASSQSSVTIPFERTFRNLDL--NRPQGGEELAQFNFCGCGWPQHMLIPKGTPE 594

Query: 488 GMPFQLFVMLSNYDLDRIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGFPFDR-PSSSA 312
           GM  QLFVM+SNYD D+IDQ    +  C +A S+CG+KDK YPDRR+MG+PFDR P +  
Sbjct: 595 GMKSQLFVMISNYDDDKIDQ--STEGVCNDAGSYCGIKDKLYPDRRSMGYPFDRMPRNGV 652

Query: 311 TSLQDFILPNMGLQDITIQLQNVT-EPNPRN 222
            +LQ F+ PNM +QD+TI+  + T  P  RN
Sbjct: 653 DTLQQFLTPNMRVQDVTIKFSDRTVRPKQRN 683


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = -3

Query: 656 NIVRQSTESSITIPFEQTFRDLSAQGNDPRRNDLTTFNYCGCGWPQHMLVPKGTEA 489
           N  R  TE +   P  Q+ R       DP R      ++   GW   ++ P G +A
Sbjct: 242 NQQRTGTELTKMRPKRQSSRRHRKNLKDPCRRRQMYVDFGSVGWNDWIVAPLGYDA 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,357
Number of Sequences: 336
Number of extensions: 3560
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)