Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1705
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025716-15|AAO21409.1|  521|Caenorhabditis elegans Udp-glucuron...    31   0.99 
AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso...    30   1.3  
AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...    30   1.7  
U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor staphylo...    28   5.3  
AL110482-6|CAB60339.1|  179|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical p...    27   9.2  
Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U64856-3|AAB04987.1|  392|Caenorhabditis elegans Hypothetical pr...    27   9.2  
L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-lik...    27   9.2  
L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-lik...    27   9.2  
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ...    27   9.2  
AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical ...    27   9.2  

>AC025716-15|AAO21409.1|  521|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein31 protein.
          Length = 521

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
 Frame = -1

Query: 460 YPTMI*TGSIKMMENSSLVWKRRASVD*RIRN-TLIGALWDSRSTDLQAAPPASRTSFYQ 284
           Y  +I  GS  M+++S++  K R S+   IRN   +  +W   S DL+ A       F +
Sbjct: 298 YNMLISFGS--MVKSSTMPEKWRNSILSAIRNFPNVTFIWKYESDDLRWAENVENVHFLK 355

Query: 283 TWACRTSLFNC-KTSPNLTHGTL 218
            W  +T+L N  + S  LTHG L
Sbjct: 356 -WIPQTALLNNPRVSAFLTHGGL 377


>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
           (tbp-associated transcriptionfactor) family protein 2
           protein.
          Length = 1086

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 298 TSFYQTWACRTSLFNCKTSPNLTHGTLPCQFKMSQN-*NEIRILNHKFDF 152
           T+ Y     R +L+N   S    H  LPC  ++ +N  N++R+L  +F +
Sbjct: 827 TNRYSDDFYRAALYNSLASSVFPHDALPCHVELPENLSNDVRVLIKEFTY 876


>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
           protein Y59A8B.6 protein.
          Length = 968

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
 Frame = -3

Query: 326 PSSSATSLQDFILPNMG--LQDIT---IQLQNVTEPNPRNPP 216
           P    T +Q  I+P MG  LQDI    + L++V E NPR+PP
Sbjct: 296 PKGYLTDMQS-IIPQMGGDLQDIKKARMLLKSVRETNPRHPP 336


>U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor
           staphylococcal nuclease homologprotein 1 protein.
          Length = 914

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 311 TSLQDFILPNMGLQDITIQLQNVTEPNPRNP 219
           ++++ F+LPN   + IT+QL  V  P+ RNP
Sbjct: 206 STVRAFLLPNF--EYITLQLSGVRAPSTRNP 234


>AL110482-6|CAB60339.1|  179|Caenorhabditis elegans Hypothetical
           protein Y39G8B.7 protein.
          Length = 179

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -1

Query: 523 PSTCS-CPRALKPACPSNCSLCYP 455
           P TC+ CP A  P   SNC  C P
Sbjct: 99  PETCNMCPGATTPTPDSNCKDCSP 122


>Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 523 PSTCSCPRALKPACPSNCSLCYPT 452
           P T +CP +  P+C + C   Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220


>Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 523 PSTCSCPRALKPACPSNCSLCYPT 452
           P T +CP +  P+C + C   Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220


>Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical
           protein F17E5.2 protein.
          Length = 531

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
 Frame = -3

Query: 443 DRIDQDDGKQLTCVEASSFCGLKDKKYPDRRAMGF--PFDRPSSSATSL---QDFIL--P 285
           D+ID +   ++   E  S+C        D++AM      D+  SS+ +L   QDF+L  P
Sbjct: 146 DKIDLNSDGEVDMAEIKSYCKEMGVNLDDQKAMSIVKKMDQSGSSSVNLNEFQDFMLLYP 205

Query: 284 NMGLQDI 264
           +  ++D+
Sbjct: 206 STDMRDM 212


>U64856-3|AAB04987.1|  392|Caenorhabditis elegans Hypothetical
           protein T25F10.4 protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 635 ESSITIPFEQTFRDLSAQGNDPRRNDLTTFN 543
           +SS+ I FE  F   + +G +PR  +LTT++
Sbjct: 42  KSSLEISFEICFEWETKRGKEPRNRELTTWS 72


>L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 523 PSTCSCPRALKPACPSNCSLCYPT 452
           P T +CP +  P+C + C   Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220


>L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 523 PSTCSCPRALKPACPSNCSLCYPT 452
           P T +CP +  P+C + C   Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220


>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3a protein.
          Length = 2129

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 340  SRSTDLQAAPPASRTSFYQTWACRTSLFNCK 248
            SRS   +AAPP  + S   TW+ +T  F  K
Sbjct: 1567 SRSRSREAAPPPQQRSRNSTWSEQTDTFLAK 1597


>AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical
           protein C51G7.3 protein.
          Length = 754

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 340 SRSTDLQAAPPASRTSFYQTWACRTSLFNCK 248
           SRS   +AAPP  + S   TW+ +T  F  K
Sbjct: 192 SRSRSREAAPPPQQRSRNSTWSEQTDTFLAK 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,663,139
Number of Sequences: 27780
Number of extensions: 335718
Number of successful extensions: 821
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)