Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1703
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical pr... 31 0.60
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 28 5.5
AL032637-21|CAA21618.2| 612|Caenorhabditis elegans Hypothetical... 28 5.5
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 28 5.5
Z73912-1|CAA98145.1| 465|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z14067-1|CAA78450.1| 465|Caenorhabditis elegans putative integr... 28 7.3
Z14066-1|CAA78449.1| 465|Caenorhabditis elegans putative integr... 28 7.3
Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 27 9.7
U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein. 27 9.7
M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein ( C.ele... 27 9.7
AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical... 27 9.7
>Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical
protein C09G5.1 protein.
Length = 473
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +3
Query: 201 QIRDAFDEVRGKMDKINSENCYISHLDDLYLSEDSVS-----HHPDVKEININPVFPNRT 365
Q+ D + R K DK N+ NC IS+ L +ED+ + +V+E+N +F R+
Sbjct: 351 QVHDMVAQYREKKDKFNNGNCEISYEMALQPNEDNATVQRNFEKKEVREMNQASLFVRRS 410
Query: 366 AM 371
+
Sbjct: 411 LL 412
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 518 IGSHIGNGRKEIIHHTRIVGIIDGGSNKPGLENE 417
+ S I R+EI+ H R +G D + KP ENE
Sbjct: 204 VPSGITYDREEIVQHLRRIGHFDPVTRKPLTENE 237
>AL032637-21|CAA21618.2| 612|Caenorhabditis elegans Hypothetical
protein Y43F8C.3 protein.
Length = 612
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 580 LYDEVYDIFGEKYIALAFM*GLAATSAT 497
+Y +I GEKY++L F +TSAT
Sbjct: 290 IYTYTQEILGEKYVSLGFQMSRPSTSAT 317
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 518 IGSHIGNGRKEIIHHTRIVGIIDGGSNKPGLENE 417
+ S I R+EI+ H R +G D + KP ENE
Sbjct: 204 VPSGITYDREEIVQHLRRIGHFDPVTRKPLTENE 237
>Z73912-1|CAA98145.1| 465|Caenorhabditis elegans Hypothetical
protein ZK524.1 protein.
Length = 465
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 168 MHKAILLTNCSLFSPFSLKLYAS 100
+H+ ++TNCSL S F L+++ S
Sbjct: 164 LHQIFVVTNCSLISVFYLRVFPS 186
>Z14067-1|CAA78450.1| 465|Caenorhabditis elegans putative integral
membrane protein protein.
Length = 465
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 168 MHKAILLTNCSLFSPFSLKLYAS 100
+H+ ++TNCSL S F L+++ S
Sbjct: 164 LHQIFVVTNCSLISVFYLRVFPS 186
>Z14066-1|CAA78449.1| 465|Caenorhabditis elegans putative integral
membrane protein protein.
Length = 465
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 168 MHKAILLTNCSLFSPFSLKLYAS 100
+H+ ++TNCSL S F L+++ S
Sbjct: 164 LHQIFVVTNCSLISVFYLRVFPS 186
>Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical
protein Y45F10C.1 protein.
Length = 645
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 426 GERSSRKKLYSWPYCANAASRYGLGIPG*C*SLSRRDGEKQSLRRGISHQD 274
G+ RK+ +W A A+ G G SRRDGE S R+ H D
Sbjct: 362 GQHEGRKR--AWKTRATGANSGNTGSSGNYSKRSRRDGEGCSSRQETPHMD 410
>Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +2
Query: 359 PYRDAAFAQYGHE*SFFLELRSPNQVY*TRHQ*YLRSWYDVLFPFGRCRCG--CQSLHK 529
PY +A +G ELR P+Q H Y D FG+C G CQ +HK
Sbjct: 154 PYGEACRFAHGEN-----ELRMPSQPRGKAHPKYKTQLCDKFSNFGQCPYGPRCQFIHK 207
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = -3
Query: 407 KSSIHGHIVQMQHRGTVWEYRVDVD----LFHVGMVRNRVFGEV 288
++SI + + ++H G V+ YR++VD +F V+ R GE+
Sbjct: 207 ETSIGQYTISVRHDGRVFHYRINVDNTEKMFITQEVKFRTLGEL 250
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = -3
Query: 407 KSSIHGHIVQMQHRGTVWEYRVDVD----LFHVGMVRNRVFGEV 288
++SI + + ++H G V+ YR++VD +F V+ R GE+
Sbjct: 212 ETSIGQYTISVRHDGRVFHYRINVDNTEKMFITQEVKFRTLGEL 255
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = -3
Query: 407 KSSIHGHIVQMQHRGTVWEYRVDVD----LFHVGMVRNRVFGEV 288
++SI + + ++H G V+ YR++VD +F V+ R GE+
Sbjct: 222 ETSIGQYTISVRHDGRVFHYRINVDNTEKMFITQEVKFRTLGEL 265
>U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein.
Length = 494
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +2
Query: 359 PYRDAAFAQYGHE*SFFLELRSPNQVY*TRHQ*YLRSWYDVLFPFGRCRCG--CQSLHK 529
PY +A +G ELR P+Q H Y D FG+C G CQ +HK
Sbjct: 154 PYGEACRFAHGEN-----ELRMPSQPRGKAHPKYKTQLCDKFSNFGQCPYGPRCQFIHK 207
>M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein (
C.elegans DNA homologousto the v-abl oncogene. ).
Length = 552
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = -3
Query: 407 KSSIHGHIVQMQHRGTVWEYRVDVD----LFHVGMVRNRVFGEV 288
++SI + + ++H G V+ YR++VD +F V+ R GE+
Sbjct: 73 ETSIGQYTISVRHDGRVFHYRINVDNTEKMFITQEVKFRTLGEL 116
>AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +2
Query: 359 PYRDAAFAQYGHE*SFFLELRSPNQVY*TRHQ*YLRSWYDVLFPFGRCRCG--CQSLHK 529
PY +A +G ELR P+Q H Y D FG+C G CQ +HK
Sbjct: 154 PYGEACRFAHGEN-----ELRMPSQPRGKAHPKYKTQLCDKFSNFGQCPYGPRCQFIHK 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,320,472
Number of Sequences: 27780
Number of extensions: 362152
Number of successful extensions: 937
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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