Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1696
         (671 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    80   6e-14
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.003
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.055
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   2.7  
UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1; Ph...    33   4.8  
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    33   8.3  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 79.8 bits (188), Expect = 6e-14
 Identities = 43/74 (58%), Positives = 47/74 (63%)
 Frame = +2

Query: 404 GAPTARRTNATTSFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVP 583
           G P AR  + TTSFLTA  L+Y            RLALQ  LVK FKV SF+L+GL RV 
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVL 89

Query: 584 YRYFSSLPPRAGSG 625
           Y YFSSLPPR GSG
Sbjct: 90  YCYFSSLPPRVGSG 103


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 62  GKCFR*CSSCDDPRISPLTSQYECPQ 139
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.055
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +1

Query: 568 PRKSPVSLFFVTTSPCREW 624
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 478 SWNYRGCWHQTCP 516
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1;
           Photorhabdus luminescens subsp. laumondii|Rep:
           Similarities with ribonuclease - Photorhabdus
           luminescens subsp. laumondii
          Length = 272

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +1

Query: 358 SPTICSANVSVSPRMRCTDSAAH-KCNYELFNRNNFSIRYWSWNYRGCWHQTC 513
           SP  C        R++ ++  A  +  YE F    FS   +SW   G W QTC
Sbjct: 92  SPAFCKGKAKNIERLKKSNKLAEAQREYEKFELQCFSENKFSWVIHGLWAQTC 144


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 382 VSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 480
           V+  PR+R  D AA + NY L NR+N+ +  W+
Sbjct: 163 VNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,651,482
Number of Sequences: 1657284
Number of extensions: 12509088
Number of successful extensions: 27514
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27509
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)