BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1693
(717 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 3.3
AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450 ... 23 3.3
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 23 3.3
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 4.3
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 7.6
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 7.6
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 7.6
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 7.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.6
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 21 7.6
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 7.6
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 21 7.6
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 640 SIFIVFYFLNLFWTSTNNL 696
S + +F+ L+W T+NL
Sbjct: 14 SFCCILFFIYLYWQQTSNL 32
>AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 505
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 307 LLFYYGLCTYIIYLHMYTIQHLKY 378
LLFY C I H+Y++ L Y
Sbjct: 15 LLFYLFYCYKTIKQHIYSLISLSY 38
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 307 LLFYYGLCTYIIYLHMYTIQHLKY 378
LLFY C I H+Y++ L Y
Sbjct: 15 LLFYLFYCYKTIKQHIYSLISLSY 38
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 260 PARNDAVVILFIVSTPCLVSTLNMRIP 180
PAR+ + +V+ C V + MR+P
Sbjct: 334 PARSRRHLPAHLVAGTCFVQLIGMRVP 360
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.4 bits (43), Expect = 7.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 151 NTTCIPITSHYFYVHS*AKSYPTKHQAFYISRIMLINKS 35
NTT +T Y+ +S+P Q I M N+S
Sbjct: 455 NTTLQNLTPQLNYISMKLQSFPLLSQRHQIDAKMFCNES 493
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 156 GKTPRVYR*HLTISMYTL 103
G+ PR+ H T+ +YT+
Sbjct: 115 GEPPRICYYHFTLELYTV 132
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 156 GKTPRVYR*HLTISMYTL 103
G+ PR+ H T+ +YT+
Sbjct: 115 GEPPRICYYHFTLELYTV 132
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 376 ILNVV*YTCVNILYTYINHNKIIME 302
I+ + TC +++ +NH K I+E
Sbjct: 169 IIKIQFATCAHLILQRVNHVKKILE 193
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 283 FTYLIKIPLLFYYGLCTYIIYLHMYTI 363
F + +PLL ++GL II M+ +
Sbjct: 1318 FNEIYGVPLLLFFGLNFLIITQAMFLV 1344
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 342 IFTHVYYTTFKIFLEIL 392
+F V YTT+ IFL ++
Sbjct: 238 LFVGVIYTTYTIFLLLI 254
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 280 LFTYLIKIPLLFYYGLCTYIIYLHMY 357
+FT + L YY C II L +Y
Sbjct: 274 IFTMHLLFLLCIYYFYCALIILLCIY 299
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.4 bits (43), Expect = 7.6
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 277 FLFTYLIKIPLLFYYGLCTY 336
F+FT++ + + Y+ LC +
Sbjct: 447 FIFTFITLLTIGLYFQLCEF 466
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,249
Number of Sequences: 336
Number of extensions: 4038
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -