Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1691
(700 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 23 2.4
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 23 2.4
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 23 2.4
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 23 2.4
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 4.2
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 22 4.2
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 22 4.2
DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory pro... 22 5.5
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 5.5
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 22 5.5
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 22 5.5
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 7.3
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 7.3
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 420 RRVRVEH*CSSQLYCRYSLNGEHR 349
R++RV H C S++ RY G R
Sbjct: 78 RQLRVSHGCVSKILNRYQETGSIR 101
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 72 NRFCRILQYADDIALYTISNSFSQACNCLNSALFN 176
NR CR+ + D+ Y + SF+ + LFN
Sbjct: 274 NRLCRLCKRVDEEISYIVLMSFASDLLFILIQLFN 308
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 72 NRFCRILQYADDIALYTISNSFSQACNCLNSALFN 176
NR CR+ + D+ Y + SF+ + LFN
Sbjct: 274 NRLCRLCKRVDEEISYIVLMSFASDLLFILIQLFN 308
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 72 NRFCRILQYADDIALYTISNSFSQACNCLNSALFN 176
NR CR+ + D+ Y + SF+ + LFN
Sbjct: 274 NRLCRLCKRVDEEISYIVLMSFASDLLFILIQLFN 308
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 PPLALRRQFLTDRFFY 677
PPL+L Q L FFY
Sbjct: 295 PPLSLHGQLLWREFFY 310
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 347 EFRIQENAQKLNFTQDWNRLVTNFNIY 267
E Q N + NF +N+ +N+N Y
Sbjct: 201 ESSYQFNDPQFNFNYQYNQAYSNYNNY 227
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 347 EFRIQENAQKLNFTQDWNRLVTNFNIY 267
E Q N + NF +N+ +N+N Y
Sbjct: 221 ESSYQFNDPQFNFNYQYNQAYSNYNNY 247
>DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory
protein 5 protein.
Length = 144
Score = 21.8 bits (44), Expect = 5.5
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -3
Query: 317 LNFTQDWNRLVTNFN 273
LN+ +WN+LV ++
Sbjct: 105 LNYRNEWNQLVAKYD 119
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/35 (20%), Positives = 17/35 (48%)
Frame = +3
Query: 177 LNSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIEI 281
++ ++ C + KC +V + V+PE+ +
Sbjct: 232 IDMYMRRKCQECRLKKCLSVGMRPECVVPEVQCAV 266
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 684 LLCRKIYQLETVYARLKEVQNIQLV 610
+LCR Y+L +V ++ ++QL+
Sbjct: 232 ILCRLHYKLTSVMQKINSAFSVQLL 256
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 684 LLCRKIYQLETVYARLKEVQNIQLV 610
+LCR Y+L +V ++ ++QL+
Sbjct: 232 ILCRLHYKLTSVMQKINSAFSVQLL 256
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 444 YSQKLLYNALIRSHFDYGCFVLEPCNKMALTKLNR 548
Y ++ L + SH F + C+ +A+TKL +
Sbjct: 183 YDEQSLRVPKVNSHGKIKTFKCKQCDFVAITKLEQ 217
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 249 KRVIPEINIEICNQ 290
+RV+PEI I+I Q
Sbjct: 84 QRVVPEIKIQISQQ 97
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,151
Number of Sequences: 336
Number of extensions: 3320
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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