Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1691
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 97 2e-20
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 88 1e-17
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 88 1e-17
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 88 1e-17
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 88 1e-17
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 83 3e-16
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 74 2e-13
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 69 5e-12
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 69 5e-12
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 68 1e-11
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 67 2e-11
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 66 6e-11
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 66 6e-11
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 56 4e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 55 1e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 54 2e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 50 3e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 50 3e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 50 3e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 50 3e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 50 3e-06
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 46 7e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 46 7e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 46 7e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 46 7e-05
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 39 0.006
BT028790-1|ABI34171.1| 806|Drosophila melanogaster IP11226p pro... 29 4.6
AE014298-1857|AAF48237.1| 334|Drosophila melanogaster CG4187-PA... 29 4.6
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 29 6.1
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 97.1 bits (231), Expect = 2e-20
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 2/234 (0%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVN--RFCRILQYADDIALYTISNSFSQACNCLNSALFN 176
+PQGS +S +L+ I L ++ + + YADD L N + L++ +
Sbjct: 633 IPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNKNTNTNFNLDNLFDD 692
Query: 177 LNSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIEICNQSIPVLSKVKFLGILLDSKLSGV 356
+ +W + SLS+ KC + RKR I N IP ++ +K LGI L++K
Sbjct: 693 IENWCSYSGASLSLSKCQHLHICRKRHCT-CKISCNNFQIPSVTSLKILGITLNNKYKWN 751
Query: 357 HHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCNKMALT 536
H+N + K+ +N+++ LS +K+ + ++ + A I + +YG F+ K L
Sbjct: 752 THINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKATIIAKLEYGLFLYGHAPKSILN 811
Query: 537 KLNRIQSKCLRIISGAMKSSPINALQVECFEPPLALRRQFLTDRFFYKVISLSN 698
K+ + +R+ GA +S+PIN L E PPL ++R + +I N
Sbjct: 812 KIKTPFNSAIRLALGAYRSTPINNLLYESNTPPLEMKRDLQIAKLSQNLILSKN 865
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 87.8 bits (208), Expect = 1e-17
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNSALFNLN 182
+PQGSVL P+LY +YTA D ++ +ADD A+ + S +A L+ L ++
Sbjct: 636 VPQGSVLGPILYTLYTA--DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVE 693
Query: 183 SWLNDHCLSLSIPKCSAVAFS-RKRVIPEINIEICNQSIPVLSKVKFLGILLDSKLSGVH 359
WL D +S+++ KC V F+ K+ P + + N IP +V +LG+ LD +L+
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNKQTCPPLVLN--NICIPQADEVTYLGVHLDRRLTWRK 751
Query: 360 HLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCNKMALTK 539
H+ ++ L L + + LLYN++++ + YG + ++ +
Sbjct: 752 HIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDI 811
Query: 540 LNRIQSKCLRIISGA 584
+ R QS+ LRII+GA
Sbjct: 812 IQRAQSRILRIITGA 826
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 87.8 bits (208), Expect = 1e-17
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNSALFNLN 182
+PQGSVL P L+NI+T + N C + +ADD A+Y+ S+S+ + S L L+
Sbjct: 666 VPQGSVLGPTLFNIFTHDIPQATN--CVLSLFADDAAVYSAGFSYSEINQSMQSYLNELD 723
Query: 183 SWLNDHCLSLSIPKCSAVAFSRKR---VIPEINIEICNQSIPVLSKVKFLGILLDSKLSG 353
+ + ++ K +A+ F+++R +P+ + I + I + +++LGI+ D KL+
Sbjct: 724 IYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKLTF 783
Query: 354 VHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCNKMAL 533
+H+N KV K I L L K ++ +++ + YG V C + +
Sbjct: 784 KYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHI 843
Query: 534 TKLNRIQSKCLRII 575
KL Q+K L++I
Sbjct: 844 KKLQICQNKLLKLI 857
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 87.8 bits (208), Expect = 1e-17
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNSALFNLN 182
+PQGSVL P+LY +YTA D ++ +ADD A+ + S +A L+ L ++
Sbjct: 636 VPQGSVLGPILYTLYTA--DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVE 693
Query: 183 SWLNDHCLSLSIPKCSAVAFS-RKRVIPEINIEICNQSIPVLSKVKFLGILLDSKLSGVH 359
WL D +S+++ KC V F+ K+ P + + N IP +V +LG+ LD +L+
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNKQTCPPLVLN--NICIPQADEVTYLGVHLDRRLTWRK 751
Query: 360 HLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCNKMALTK 539
H+ ++ L L + + LLYN++++ + YG + ++ +
Sbjct: 752 HIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDI 811
Query: 540 LNRIQSKCLRIISGA 584
+ R QS+ LRII+GA
Sbjct: 812 IQRAQSRILRIITGA 826
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 87.8 bits (208), Expect = 1e-17
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNSALFNLN 182
+PQGSVL P L+NI+T + N C + +ADD A+Y+ S+S+ + S L L+
Sbjct: 614 VPQGSVLGPTLFNIFTHDIPQATN--CVLSLFADDAAVYSAGFSYSEINQSMQSYLNELD 671
Query: 183 SWLNDHCLSLSIPKCSAVAFSRKR---VIPEINIEICNQSIPVLSKVKFLGILLDSKLSG 353
+ + ++ K +A+ F+++R +P+ + I + I + +++LGI+ D KL+
Sbjct: 672 IYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKLTF 731
Query: 354 VHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCNKMAL 533
+H+N KV K I L L K ++ +++ + YG V C + +
Sbjct: 732 KYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHI 791
Query: 534 TKLNRIQSKCLRII 575
KL Q+K L++I
Sbjct: 792 KKLQICQNKLLKLI 805
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 83.4 bits (197), Expect = 3e-16
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 4/198 (2%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNSALFNLN 182
+PQGSVL P LY IYTA D N + +ADD A+ + S S QA L L ++
Sbjct: 638 VPQGSVLGPTLYLIYTA--DIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIK 695
Query: 183 SWLNDHCLSLSIPKCSAVAFSRKRV-IPEINIEICNQSIPVLSKVKFLGILLDSKLSGVH 359
WL+D + ++ KC V F+ R P + + + +P +V +LG+ LD +L+
Sbjct: 696 KWLSDWRIKVNEQKCKHVTFTLNRQDCPPLLLN--SIPLPKADEVTYLGVHLDRRLTWRR 753
Query: 360 HLNYICNKVEKSINVLRALSGVKWGSHPYS---QKLLYNALIRSHFDYGCFVLEPCNKMA 530
H+ +++ N L L + GS P S + LLYN++++ + YG + +
Sbjct: 754 HIEAKKTQLKLKANNLHWL--INSGS-PLSLDHKVLLYNSILKPIWTYGSQLWGNASNSN 810
Query: 531 LTKLNRIQSKCLRIISGA 584
+ + R QSK LR I+GA
Sbjct: 811 IDIIQRAQSKILRTITGA 828
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 74.1 bits (174), Expect = 2e-13
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 2/234 (0%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVNRF--CRILQYADDIALYTISNSFSQACNCLNSALFN 176
+PQGS LS +L+ I ++ V R I YADD ++T + + L
Sbjct: 641 IPQGSPLSVVLFMIAIEDINDIVTRHKDIYISLYADDAIIFTKIKNINTVREKFLEILQE 700
Query: 177 LNSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIEICNQSIPVLSKVKFLGILLDSKLSGV 356
+NSW SL+I KC + RK+ +I +++I ++ +K LGI D KL
Sbjct: 701 INSWGATSGASLAIEKCQTLHICRKQRCNLSDIVFNSRTIKDVNFLKILGITFDPKLLFK 760
Query: 357 HHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCNKMALT 536
H + ++E N+++ LS H + + AL+ S DYG + C K L
Sbjct: 761 QHCQTLRKQLETRFNIIKFLSSKYSYIHIKTLIDITRALMLSKIDYGLPIFGWCAKSHLK 820
Query: 537 KLNRIQSKCLRIISGAMKSSPINALQVECFEPPLALRRQFLTDRFFYKVISLSN 698
KL +R A +SP+ E P + R + T K+ + SN
Sbjct: 821 KLQVPYHGAVRRAIHAFPTSPVACTLAESGLPSIQSRVEETTLMLIPKLYTTSN 874
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 69.3 bits (162), Expect = 5e-12
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Frame = +3
Query: 3 LPQGSVLSPLLYN-IYTAILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNSALFNL 179
+PQGSVL PLL+N +Y IL + I+ +ADD+AL + +A N + +
Sbjct: 51 VPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAI 110
Query: 180 NSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIEICNQSIPVLSKVKFLGILLDSKLSGVH 359
WL+ L L+ K AV S ++ + +E+ + +K+L +++D++LS
Sbjct: 111 EHWLSSMGLELAPEKTKAVLISSRKAVETATVEVGGTLVSSSRAIKYLEVMIDTRLSFRE 170
Query: 360 HLNYICNK 383
HL Y +K
Sbjct: 171 HLAYASSK 178
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 69.3 bits (162), Expect = 5e-12
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Frame = +3
Query: 3 LPQGSVLSPLLYNI-YTAILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNSALFNL 179
+PQGSVL P+L+NI Y IL + R + +ADD+A+ ++ + + + N A+
Sbjct: 613 VPQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAA 672
Query: 180 NSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIEICNQSIPVLSKVKFLGILLDSKLSGVH 359
WL L ++ K V S ++ + + +E+ I +K+LG+L+D +LS
Sbjct: 673 IEWLEKVGLKIAAHKTEVVLLSSRKSVECMRVEVKGVEIASAETLKYLGVLIDRRLSFKA 732
Query: 360 HLNYICNKVEKSINVLRALSGVKWGSHPYSQKLL 461
H Y K + L + G +++LL
Sbjct: 733 HARYASKKAAMTAAALARIMPNVGGPRLPARRLL 766
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 67.7 bits (158), Expect = 1e-11
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAIL------DTTVNRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGSVL PLLY+++TA L R + YADDIAL SN ++A L
Sbjct: 641 VPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQE 700
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIP-EINIEICNQSIPVLSKVKFLGILLDS 341
L L +W L ++ K F+ K + P IE+ + S+ K+LGI LD
Sbjct: 701 YLTTLAAWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDK 760
Query: 342 KLSGVHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCN 521
+L+ HL + + + LR L K +++ +Y + + YG +
Sbjct: 761 RLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAA 820
Query: 522 KMALTKLNRIQSKCLRIIS 578
K ++ +Q++ +R I+
Sbjct: 821 KSNYNRIQVLQNRAMRAIT 839
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 67.3 bits (157), Expect = 2e-11
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAIL---DTTVNRFCRILQYADDIALYTISNSFSQACNCLNSALF 173
+PQGSVL PLLY +Y+ + D ++ + +ADD+ + S A + + +
Sbjct: 640 VPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAY 699
Query: 174 NLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIEICNQSIPVLSKVKFLGILLDSKLSG 353
+ W + ++ K + V F+ KR P + I +P + K+LG+LLD +L+
Sbjct: 700 RFSEWARRWNIGINSSKSNNVCFTLKRRTPP-PVYIEEVPVPQPNAAKYLGVLLDRRLTF 758
Query: 354 VHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCNKMAL 533
H+ I ++ + L + ++ +Y ++ ++ YGC + +
Sbjct: 759 SKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHI 818
Query: 534 TKLNRIQSKCLRIISG 581
++ IQ+K R+I+G
Sbjct: 819 KRIQAIQNKVARLITG 834
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 65.7 bits (153), Expect = 6e-11
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTV------NRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGSVL P LY+++ + + T I YADD A+ T S S A + L
Sbjct: 642 VPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQE 701
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAF-SRKRVIPEINIEICNQSIPVLSKVKFLGILLDS 341
L W + + ++ KC+ V F +R P +++ + I K+LGI LD
Sbjct: 702 YLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLN--GRLIRHHQAYKYLGITLDR 759
Query: 342 KLSGVHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCN 521
KL+ H+ I + + L + + +Y +++ YG V
Sbjct: 760 KLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAA 819
Query: 522 KMALTKLNRIQSKCLRIISGA 584
K L K+ +Q+K LR ISGA
Sbjct: 820 KSHLNKIRILQAKTLRRISGA 840
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 65.7 bits (153), Expect = 6e-11
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTV------NRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGSVL P LY+++ + + T I YADD A+ T S S A + L
Sbjct: 444 VPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQE 503
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAF-SRKRVIPEINIEICNQSIPVLSKVKFLGILLDS 341
L W + + ++ KC+ V F +R P +++ + I K+LGI LD
Sbjct: 504 YLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLN--GRLIRHHQAYKYLGITLDR 561
Query: 342 KLSGVHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFVLEPCN 521
KL+ H+ I + + L + + +Y +++ YG V
Sbjct: 562 KLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAA 621
Query: 522 KMALTKLNRIQSKCLRIISGA 584
K L K+ +Q+K LR ISGA
Sbjct: 622 KSHLNKIRILQAKTLRRISGA 642
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 56.4 bits (130), Expect = 4e-08
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTA------ILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGS L PLLY+I+++ I + + + YADD + + + A +
Sbjct: 698 VPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNEN 757
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIP--EINIEICNQSIPVLSKVKFLGILLD 338
L + W + +S++ K V F+ K +P +N++I Q+I SK +LG+ LD
Sbjct: 758 YLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLD 817
Query: 339 SKLSGVHHLNYICNK 383
SKL+ H+ + K
Sbjct: 818 SKLTLSSHVTKLLGK 832
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 54.8 bits (126), Expect = 1e-07
Identities = 49/229 (21%), Positives = 99/229 (43%), Gaps = 4/229 (1%)
Frame = +3
Query: 6 PQGSVLSPLLYNIYTAILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNSALFNLNS 185
PQGS+ P +++I +L + +C++ YADD+ L NS + + + +
Sbjct: 633 PQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQLMSIVET 692
Query: 186 WLND--HCLSLSIPKCSAVAFSRKRVIPEINIEICNQSIPVLSKVKFLGILLDSKLSGVH 359
W + CLS S + + +R P + +++P + ++LGI + + +
Sbjct: 693 WGAEVGDCLSTSKTVIMLLKGALRRA-P--TVRFAGRNLPYVRSCRYLGITVSEGMKFLT 749
Query: 360 HLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDYGCFV-LEPCNKMAL- 533
H+ + ++ + L + WG P +++ +Y+ L+ +G V + ++A
Sbjct: 750 HIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLFGAPVWYDTAEQVAAQ 809
Query: 534 TKLNRIQSKCLRIISGAMKSSPINALQVECFEPPLALRRQFLTDRFFYK 680
+L Q L ++ ALQV PPL L + L ++ K
Sbjct: 810 RRLASCQRLILLGCLSVCRTVSTVALQVLGGAPPLDLAAKLLAIKYKLK 858
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 53.6 bits (123), Expect = 2e-07
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTA------ILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGS L PLLY+I+++ I + + YADD + + + A +
Sbjct: 686 VPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNEN 745
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEI--NIEICNQSIPVLSKVKFLGILLD 338
L + + W + +S++ K V F+ K +P ++I Q I + SK +LG++LD
Sbjct: 746 YLKSFSDWADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVIKIESKQSYLGVILD 805
Query: 339 SKLSGVHHLNYICNK 383
SKL+ H+ + K
Sbjct: 806 SKLTLSSHVTKLMGK 820
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 50.0 bits (114), Expect = 3e-06
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTA------ILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGS L P+LY+I+++ I + + YADD + + + A +
Sbjct: 570 VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNEN 629
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEI--NIEICNQSIPVLSKVKFLGILLD 338
L + W + +S++ K V ++ K IP ++I Q+I SK +LG++LD
Sbjct: 630 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 689
Query: 339 SKLSGVHHLNYICNK 383
SKL+ H+ + K
Sbjct: 690 SKLTLSPHVTKVVGK 704
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.0 bits (114), Expect = 3e-06
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTA------ILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGS L P+LY+I+++ I + + YADD + + + A +
Sbjct: 686 VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNEN 745
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEI--NIEICNQSIPVLSKVKFLGILLD 338
L + W + +S++ K V ++ K IP ++I Q+I SK +LG++LD
Sbjct: 746 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 805
Query: 339 SKLSGVHHLNYICNK 383
SKL+ H+ + K
Sbjct: 806 SKLTLSPHVTKVVGK 820
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.0 bits (114), Expect = 3e-06
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTA------ILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGS L P+LY+I+++ I + + YADD + + + A +
Sbjct: 686 VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNEN 745
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEI--NIEICNQSIPVLSKVKFLGILLD 338
L + W + +S++ K V ++ K IP ++I Q+I SK +LG++LD
Sbjct: 746 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 805
Query: 339 SKLSGVHHLNYICNK 383
SKL+ H+ + K
Sbjct: 806 SKLTLSPHVTKVVGK 820
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 50.0 bits (114), Expect = 3e-06
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTA------ILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGS L P+LY+I+++ I + + YADD + + + A +
Sbjct: 648 VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNEN 707
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEI--NIEICNQSIPVLSKVKFLGILLD 338
L + W + +S++ K V ++ K IP ++I Q+I SK +LG++LD
Sbjct: 708 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 767
Query: 339 SKLSGVHHLNYICNK 383
SKL+ H+ + K
Sbjct: 768 SKLTLSPHVTKVVGK 782
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.0 bits (114), Expect = 3e-06
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTA------ILDTTVNRFCRILQYADDIALYTISNSFSQACNCLNS 164
+PQGS L P+LY+I+++ I + + YADD + + + A +
Sbjct: 686 VPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNEN 745
Query: 165 ALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEI--NIEICNQSIPVLSKVKFLGILLD 338
L + W + +S++ K V ++ K IP ++I Q+I SK +LG++LD
Sbjct: 746 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 805
Query: 339 SKLSGVHHLNYICNK 383
SKL+ H+ + K
Sbjct: 806 SKLTLSPHVTKVVGK 820
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 45.6 bits (103), Expect = 7e-05
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILD-TTVNRFCR-------------ILQYADDIALYTISNSFS 140
+PQGS+L P+LY+IY++ + V + R + YADD + + S
Sbjct: 242 VPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTK 301
Query: 141 QACNCLNSALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIE--ICNQSIPVLSKV 314
A N + L W ++++ K + FS K+ I I Q L+K
Sbjct: 302 LAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQ 361
Query: 315 KFLGILLDSKLSGVHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDY 494
++LG++LD +L+ H+ + K + L L G ++ LL+ ++ + Y
Sbjct: 362 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 421
Query: 495 GCFVL-EPCNKMALTKLNRIQSKCLRIISGAMK 590
+ + K+ +++K +R I A +
Sbjct: 422 AIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 454
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 45.6 bits (103), Expect = 7e-05
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILD-TTVNRFCR-------------ILQYADDIALYTISNSFS 140
+PQGS+L P+LY+IY++ + V + R + YADD + + S
Sbjct: 689 VPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTK 748
Query: 141 QACNCLNSALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIE--ICNQSIPVLSKV 314
A N + L W ++++ K + FS K+ I I Q L+K
Sbjct: 749 LAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQ 808
Query: 315 KFLGILLDSKLSGVHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDY 494
++LG++LD +L+ H+ + K + L L G ++ LL+ ++ + Y
Sbjct: 809 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 868
Query: 495 GCFVL-EPCNKMALTKLNRIQSKCLRIISGAMK 590
+ + K+ +++K +R I A +
Sbjct: 869 AIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 45.6 bits (103), Expect = 7e-05
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILD-TTVNRFCR-------------ILQYADDIALYTISNSFS 140
+PQGS+L P+LY+IY++ + V + R + YADD + + S
Sbjct: 689 VPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTK 748
Query: 141 QACNCLNSALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIE--ICNQSIPVLSKV 314
A N + L W ++++ K + FS K+ I I Q L+K
Sbjct: 749 LAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQ 808
Query: 315 KFLGILLDSKLSGVHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDY 494
++LG++LD +L+ H+ + K + L L G ++ LL+ ++ + Y
Sbjct: 809 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 868
Query: 495 GCFVL-EPCNKMALTKLNRIQSKCLRIISGAMK 590
+ + K+ +++K +R I A +
Sbjct: 869 AIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 45.6 bits (103), Expect = 7e-05
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILD-TTVNRFCR-------------ILQYADDIALYTISNSFS 140
+PQGS+L P+LY+IY++ + V + R + YADD + + S
Sbjct: 689 VPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTK 748
Query: 141 QACNCLNSALFNLNSWLNDHCLSLSIPKCSAVAFSRKRVIPEINIE--ICNQSIPVLSKV 314
A N + L W ++++ K + FS K+ I I Q L+K
Sbjct: 749 LAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQ 808
Query: 315 KFLGILLDSKLSGVHHLNYICNKVEKSINVLRALSGVKWGSHPYSQKLLYNALIRSHFDY 494
++LG++LD +L+ H+ + K + L L G ++ LL+ ++ + Y
Sbjct: 809 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 868
Query: 495 GCFVL-EPCNKMALTKLNRIQSKCLRIISGAMK 590
+ + K+ +++K +R I A +
Sbjct: 869 AIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 39.1 bits (87), Expect = 0.006
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVNRFCRILQYADDIALYTIS 128
+PQGSVL P+LY +YTA D N I +ADD A+ + S
Sbjct: 177 VPQGSVLGPILYTLYTA--DIPTNYQLTIFTFADDTAIISRS 216
>BT028790-1|ABI34171.1| 806|Drosophila melanogaster IP11226p
protein.
Length = 806
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVNRFCRIL 92
LP S L+P+LY + TA + R+C L
Sbjct: 727 LPVNSALNPVLYTLTTAAFKQQLRRYCHTL 756
>AE014298-1857|AAF48237.1| 334|Drosophila melanogaster CG4187-PA
protein.
Length = 334
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 3 LPQGSVLSPLLYNIYTAILDTTVNRFCRIL 92
LP S L+P+LY + TA + R+C L
Sbjct: 255 LPVNSALNPVLYTLTTAAFKQQLRRYCHTL 284
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 279 ICNQSIPVLSKVKFLGILLDSKLSGVHHLNYICNK 383
I Q I + SK +LG++LDSKL+ H+ + K
Sbjct: 1 IKGQVIKIESKQSYLGVILDSKLTLSSHVTKLMGK 35
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,523,473
Number of Sequences: 53049
Number of extensions: 560836
Number of successful extensions: 1233
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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