Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1687
         (317 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    37   0.076
UniRef50_Q9G8P8 Cluster: Ribosomal protein L6; n=1; Naegleria gr...    33   0.93 
UniRef50_Q4Z1Y2 Cluster: Putative uncharacterized protein; n=1; ...    33   1.2  
UniRef50_A6DLQ2 Cluster: Putative uncharacterized protein; n=1; ...    32   2.1  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    32   2.8  
UniRef50_A3LWK0 Cluster: Predicted protein; n=1; Pichia stipitis...    32   2.8  
UniRef50_A7SC53 Cluster: Predicted protein; n=1; Nematostella ve...    31   3.8  
UniRef50_Q1DQN1 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_UPI0000E21876 Cluster: PREDICTED: similar to proteophos...    31   6.6  
UniRef50_UPI0000617C1F Cluster: CDNA FLJ42147 fis, clone TESTI40...    31   6.6  
UniRef50_UPI0000D56082 Cluster: PREDICTED: similar to adenylate ...    30   8.7  
UniRef50_A2EFQ2 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 37.1 bits (82), Expect = 0.076
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 270 KPRGGARYPIRPIVSR 317
           +PRGGARYPIRPIVSR
Sbjct: 258 RPRGGARYPIRPIVSR 273


>UniRef50_Q9G8P8 Cluster: Ribosomal protein L6; n=1; Naegleria
           gruberi|Rep: Ribosomal protein L6 - Naegleria gruberi
          Length = 166

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = -1

Query: 233 LLFRTVHIAVFRRHGFWPRFYNNFVVFRYSISFLCFFLIYFHVSYLNE 90
           + +   H+ +  R G+   +Y N+V+F+   S LC+FL+  +VS+ ++
Sbjct: 80  IFYNIKHLKLEGR-GYKLYYYLNYVIFKLGYSHLCYFLLPLNVSFFSK 126


>UniRef50_Q4Z1Y2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 67

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -1

Query: 173 YNNFVVFRYSISFLCFFLIYF 111
           YNN+V+FRY +SF  +F ++F
Sbjct: 7   YNNYVLFRYILSFYLYFYLFF 27


>UniRef50_A6DLQ2 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 1251

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 200 RRHGFWPRFYNNFVVFRYSISFLCFFLIYF-HVSYLNE 90
           R HGFW   YNN   F+ SI  LC  ++      Y+NE
Sbjct: 874 RHHGFWKIIYNNKKDFKASIKELCAIVLSSPQFLYINE 911


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -3

Query: 315 DSL*GELGTGPPLEV 271
           DSL GELGTGPPLEV
Sbjct: 279 DSLYGELGTGPPLEV 293


>UniRef50_A3LWK0 Cluster: Predicted protein; n=1; Pichia
           stipitis|Rep: Predicted protein - Pichia stipitis
           (Yeast)
          Length = 391

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 165 FRCISLLHFVFVFFSYLFSCFVF 97
           F C+SL+ FVF FF YL+   +F
Sbjct: 211 FMCLSLIIFVFFFFMYLYGMILF 233


>UniRef50_A7SC53 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 98

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = -1

Query: 242 VRALLFRTVHIAVFRRHGFWPRFYNNFVVFRYSISFLCFFLIYFHVSY 99
           +  LLF T++  +F    F   +  NF++F Y+I+FL F+ I F + Y
Sbjct: 23  INFLLFYTINFLLFYTINFLLFYTINFLLF-YTINFLLFYTINFLLFY 69


>UniRef50_Q1DQN1 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 303

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 185 WPRFYNNFVVFRYSISFLCFFLIYFHVSY 99
           W  FY  F+   Y ++ + F+ +Y H+S+
Sbjct: 54  WRNFYEIFIKMHYGLAAIAFYGLYHHISF 82


>UniRef50_UPI0000E21876 Cluster: PREDICTED: similar to
           proteophosphoglycan ppg4; n=1; Pan troglodytes|Rep:
           PREDICTED: similar to proteophosphoglycan ppg4 - Pan
           troglodytes
          Length = 334

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 183 PKSVATEHCDMNSAEQKGPNILQRPIFSSKPRG 281
           P+  +T   D+ S+E +GP+ +Q  + SS+PRG
Sbjct: 248 PQGPSTMRDDLPSSELQGPSTMQDDLSSSEPRG 280


>UniRef50_UPI0000617C1F Cluster: CDNA FLJ42147 fis, clone
           TESTI4000530.; n=1; Bos taurus|Rep: CDNA FLJ42147 fis,
           clone TESTI4000530. - Bos Taurus
          Length = 108

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -1

Query: 236 ALLFRTVHIAVFRR--HGFWPRFYNNFVVFRYSISFLC 129
           AL+   +H+AVF    H FW  +  + + FRY++  +C
Sbjct: 22  ALMLFFIHLAVFASDVHNFWVTYRYDRMSFRYTVVLMC 59


>UniRef50_UPI0000D56082 Cluster: PREDICTED: similar to adenylate
           cyclase 8; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to adenylate cyclase 8 - Tribolium castaneum
          Length = 912

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/45 (28%), Positives = 27/45 (60%)
 Frame = -1

Query: 215 HIAVFRRHGFWPRFYNNFVVFRYSISFLCFFLIYFHVSYLNEIVS 81
           +I  +R+H F+P   N+ +  ++ +  + FFL+ F+ + L E+ S
Sbjct: 583 NIEPYRQH-FFPEIENSLLPIQFPVLLVAFFLLIFYHARLIEVTS 626


>UniRef50_A2EFQ2 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 509

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 43  NKKKCKYYNLMNKDTISFKYET*K*IRKKHKN 138
           NKKK K  N M +  ++  +ET K +++KHKN
Sbjct: 304 NKKKKKELNQMKEQQLNELFETTKWMKEKHKN 335


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,314,795
Number of Sequences: 1657284
Number of extensions: 5295652
Number of successful extensions: 13659
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13652
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)