Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1687
         (317 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ838583-1|ABH09190.1|  472|Homo sapiens estrogen receptor beta ...    30   1.7  
DQ838582-1|ABH09189.1|  481|Homo sapiens estrogen receptor beta ...    30   1.7  
DQ777076-1|ABG88022.1|  474|Homo sapiens estrogen receptor beta ...    30   1.7  
BC024181-1|AAH24181.1|  323|Homo sapiens ESR2 protein protein.         30   1.7  
AY785359-1|AAV31779.1|  530|Homo sapiens estrogen receptor 2 (ER...    30   1.7  
AF215937-2|AAG29940.1|  530|Homo sapiens 5p152 protein.                30   1.7  
AF124790-1|AAD32580.1|  323|Homo sapiens estrogen receptor beta2...    30   1.7  
AF060555-1|AAC15234.1|  513|Homo sapiens estrogen receptor beta ...    30   1.7  
AF051428-1|AAC05751.1|  495|Homo sapiens estrogen receptor beta2...    30   1.7  
AF051427-1|AAC05985.1|  530|Homo sapiens estrogen receptor beta ...    30   1.7  
AB209620-1|BAD92857.1|  504|Homo sapiens estrogen receptor 2 (ER...    30   1.7  
AB006590-1|BAA24953.1|  530|Homo sapiens estrogen receptor beta ...    30   1.7  
AB006589-1|BAA31966.1|  495|Homo sapiens estrogen receptor beta ...    30   1.7  
X99101-1|CAA67555.1|  477|Homo sapiens estrogen receptor beta pr...    29   2.3  
AY672837-1|AAT77412.1|  546|Homo sapiens immunoglobulin-like dom...    29   3.0  
AY134857-1|AAN10256.1|  265|Homo sapiens unknown protein.              29   3.0  
AK129974-1|BAC85264.1|  211|Homo sapiens protein ( Homo sapiens ...    29   3.0  
AK124509-1|BAC85869.1|  190|Homo sapiens protein ( Homo sapiens ...    29   3.0  
BC020591-1|AAH20591.1|  735|Homo sapiens TMEM132E protein protein.     27   9.1  
BC018318-1|AAH18318.1|  325|Homo sapiens TMEM132E protein protein.     27   9.1  

>DQ838583-1|ABH09190.1|  472|Homo sapiens estrogen receptor beta
           isoform 5 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>DQ838582-1|ABH09189.1|  481|Homo sapiens estrogen receptor beta
           isoform 4 protein.
          Length = 481

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>DQ777076-1|ABG88022.1|  474|Homo sapiens estrogen receptor beta 4
           protein.
          Length = 474

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>BC024181-1|AAH24181.1|  323|Homo sapiens ESR2 protein protein.
          Length = 323

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>AY785359-1|AAV31779.1|  530|Homo sapiens estrogen receptor 2 (ER
           beta) protein.
          Length = 530

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>AF215937-2|AAG29940.1|  530|Homo sapiens 5p152 protein.
          Length = 530

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>AF124790-1|AAD32580.1|  323|Homo sapiens estrogen receptor beta2
           splice variant protein.
          Length = 323

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>AF060555-1|AAC15234.1|  513|Homo sapiens estrogen receptor beta 3
           isoform protein.
          Length = 513

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>AF051428-1|AAC05751.1|  495|Homo sapiens estrogen receptor beta2
           splice variant protein.
          Length = 495

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>AF051427-1|AAC05985.1|  530|Homo sapiens estrogen receptor beta
           protein.
          Length = 530

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>AB209620-1|BAD92857.1|  504|Homo sapiens estrogen receptor 2 (ER
           beta) variant protein.
          Length = 504

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 84  AVMNYSIPSNVTNLEGGPGRQ 104


>AB006590-1|BAA24953.1|  530|Homo sapiens estrogen receptor beta
           protein.
          Length = 530

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>AB006589-1|BAA31966.1|  495|Homo sapiens estrogen receptor beta cx
           protein.
          Length = 495

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 235 ALTFYNVQSSVVNLEGGPGTQ 297
           A+  Y++ S+V NLEGGPG Q
Sbjct: 52  AVMNYSIPSNVTNLEGGPGRQ 72


>X99101-1|CAA67555.1|  477|Homo sapiens estrogen receptor beta
           protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 247 YNVQSSVVNLEGGPGTQ 297
           Y++ S+V NLEGGPG Q
Sbjct: 3   YSIPSNVTNLEGGPGRQ 19


>AY672837-1|AAT77412.1|  546|Homo sapiens immunoglobulin-like
           domain-containing receptor 1 alpha protein.
          Length = 546

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 183 PKSVATEHCDMNSAEQKGPNILQRPIFSSKPRGG--ARYPIRPIVSR 317
           P+     H  M  A+  GP ++ +P++    R    + YP+ P++ R
Sbjct: 213 PEEALARHRYMKQAQALGPQMMGKPLYWGADRSSQVSSYPMHPLLQR 259


>AY134857-1|AAN10256.1|  265|Homo sapiens unknown protein.
          Length = 265

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 183 PKSVATEHCDMNSAEQKGPNILQRPIFSSKPRGG--ARYPIRPIVSR 317
           P+     H  M  A+  GP ++ +P++    R    + YP+ P++ R
Sbjct: 213 PEEALARHRYMKQAQALGPQMMGKPLYWGADRSSQVSSYPMHPLLQR 259


>AK129974-1|BAC85264.1|  211|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26464 fis, clone KDN04209. ).
          Length = 211

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 183 PKSVATEHCDMNSAEQKGPNILQRPIFSSKPRGG--ARYPIRPIVSR 317
           P+     H  M  A+  GP ++ +P++    R    + YP+ P++ R
Sbjct: 95  PEEALARHRYMKQAQALGPQMMGKPLYWGADRSSQVSSYPMHPLLQR 141


>AK124509-1|BAC85869.1|  190|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42518 fis, clone BRACE3000697. ).
          Length = 190

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 191 GFWPRFYNNFVVFRYSISFLCFFLIYFHVSY-LNEIVS 81
           G W  F   F++   SIS  CFF+I   VS  +N I+S
Sbjct: 74  GIWFYFLFRFIIDSTSISLDCFFVIVGQVSISINSILS 111


>BC020591-1|AAH20591.1|  735|Homo sapiens TMEM132E protein protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 295 GYRAPPRGLL-LKIGRCKMLGPFCSAL--FISQCSV 197
           G+   PRGL  L+IG   +LG FC A+  F+  C V
Sbjct: 537 GFLQVPRGLTDLEIGMYALLGVFCLAILVFLINCIV 572


>BC018318-1|AAH18318.1|  325|Homo sapiens TMEM132E protein protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 295 GYRAPPRGLL-LKIGRCKMLGPFCSAL--FISQCSV 197
           G+   PRGL  L+IG   +LG FC A+  F+  C V
Sbjct: 127 GFLQVPRGLTDLEIGMYALLGVFCLAILVFLINCIV 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,811,420
Number of Sequences: 237096
Number of extensions: 867979
Number of successful extensions: 1568
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)