Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1687
         (317 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical pr...    28   1.7  
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical p...    27   2.9  
Z54342-7|CAA91149.1|  460|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z49913-6|CAA90145.2|  460|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z74034-4|CAE17842.2|  319|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical p...    26   5.1  
Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical pr...    26   5.1  
U50310-5|AAA92541.1|  318|Caenorhabditis elegans Ground-like (gr...    26   5.1  
AL132876-26|CAC48128.1|  922|Caenorhabditis elegans Hypothetical...    26   5.1  
AL132876-25|CAH04764.1|  930|Caenorhabditis elegans Hypothetical...    26   5.1  
AL132876-9|CAD21661.1|  959|Caenorhabditis elegans Hypothetical ...    26   5.1  
AF040661-8|AAG24222.1|  327|Caenorhabditis elegans Hypothetical ...    26   5.1  
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical...    26   5.1  
AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical ...    26   5.1  
AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical ...    26   5.1  
AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical ...    26   6.8  
U43375-7|AAA83624.1|  271|Caenorhabditis elegans Hypothetical pr...    25   8.9  

>Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical
           protein C14H10.4 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 82  PYS*DYNIYIFFYCLDVWTSSQ 17
           P++ +YN  + F+ L+ WTSSQ
Sbjct: 63  PFAHNYNNSLMFFSLNFWTSSQ 84


>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical protein
            W09D10.2 protein.
          Length = 1335

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 233  LLFRTVHIAVFRRHGFWPRFYNNFVVFRYSISFLCFFL 120
            ++  T H+A+F ++  WP F++ F+     + F+C  L
Sbjct: 1186 IIVNTFHLALFVQYWTWPMFWSMFL--SVLLFFICALL 1221


>Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical
           protein C08H9.4b protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 296 WVPGPPSRFTT 264
           W+PGPP+RF T
Sbjct: 396 WIPGPPTRFLT 406


>Z54342-7|CAA91149.1|  460|Caenorhabditis elegans Hypothetical
           protein C08H9.12 protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 296 WVPGPPSRFTT 264
           W+PGPP+RF T
Sbjct: 391 WIPGPPTRFMT 401


>Z49913-6|CAA90145.2|  460|Caenorhabditis elegans Hypothetical
           protein ZK938.6 protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 296 WVPGPPSRFTT 264
           W+PGPP+RF T
Sbjct: 391 WIPGPPTRFMT 401


>Z74034-4|CAE17842.2|  319|Caenorhabditis elegans Hypothetical
           protein F43A11.3 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 188 FWPRFYNNFVVFRYSISFLCFFLIY 114
           F+P+FY+     + S+  +C F +Y
Sbjct: 120 FFPQFYSKIFAIKPSLIVICLFYVY 144


>Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 230 LFRTVHIAVFRRHGFWPRFYNNFVVFRYSISFLCFFLIYFHV 105
           +F   +  +F   G W  F   F+V  Y I     F+IY  +
Sbjct: 115 MFENRYFVLFVNRGCWRYFRYPFLVANYIIVITYCFIIYLEI 156


>Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 230 LFRTVHIAVFRRHGFWPRFYNNFVVFRYSISFLCFFLIYFHV 105
           +F   +  +F   G W  F   F+V  Y I     F+IY  +
Sbjct: 115 MFENRYFVLFVNRGCWRYFRYPFLVANYIIVITYCFIIYLEI 156


>U50310-5|AAA92541.1|  318|Caenorhabditis elegans Ground-like (grd
           related) protein 9 protein.
          Length = 318

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +3

Query: 165 IIIKPRPKSVATEH--CDMNSAEQKGPNILQRPI---FSSKPRGGARYPIR 302
           ++ +P+P    TE       + +   P ILQ  I   F S+P  G R P+R
Sbjct: 185 VVNEPQPIQAQTEEPATTQKATDAPPPPILQNKIERVFESEPNSGYRKPVR 235


>AL132876-26|CAC48128.1|  922|Caenorhabditis elegans Hypothetical
           protein Y105E8A.10c protein.
          Length = 922

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +3

Query: 201 EHCDMNSAEQKGPNILQ 251
           +HC MN++E+K PN+++
Sbjct: 857 KHCGMNTSEEKLPNLVK 873


>AL132876-25|CAH04764.1|  930|Caenorhabditis elegans Hypothetical
           protein Y105E8A.10b protein.
          Length = 930

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +3

Query: 201 EHCDMNSAEQKGPNILQ 251
           +HC MN++E+K PN+++
Sbjct: 865 KHCGMNTSEEKLPNLVK 881


>AL132876-9|CAD21661.1|  959|Caenorhabditis elegans Hypothetical
           protein Y105E8A.10a protein.
          Length = 959

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +3

Query: 201 EHCDMNSAEQKGPNILQ 251
           +HC MN++E+K PN+++
Sbjct: 894 KHCGMNTSEEKLPNLVK 910


>AF040661-8|AAG24222.1|  327|Caenorhabditis elegans Hypothetical
           protein W10G11.16 protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 179 RFYNNFVVFRYSISFLCFFLIYFHV 105
           R+ +NF    Y +SF+ F L+Y+ V
Sbjct: 290 RYLDNFCRVFYPLSFILFLLMYYFV 314


>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
            protein F53G12.3 protein.
          Length = 1503

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 10/26 (38%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 164  FVVFRY-SISFLCFFLIYFHVSYLNE 90
            F++F + +I+ + FF +++H  YLNE
Sbjct: 995  FIIFCFVAINIVLFFELFWHSRYLNE 1020


>AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5a protein.
          Length = 599

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 28  STHLSNKKKCKYYNLMNKDTISF 96
           S + +N   C YYN +++DT+ F
Sbjct: 55  SLNYANSNDCLYYNNIDRDTVLF 77


>AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5b protein.
          Length = 601

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 28  STHLSNKKKCKYYNLMNKDTISF 96
           S + +N   C YYN +++DT+ F
Sbjct: 55  SLNYANSNDCLYYNNIDRDTVLF 77


>AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical
           protein Y51A2D.12 protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 144 HFVFVFFSYLFSCFV 100
           HF F +  Y+F+CFV
Sbjct: 100 HFEFAYTQYIFNCFV 114


>U43375-7|AAA83624.1|  271|Caenorhabditis elegans Hypothetical
           protein K09C4.4 protein.
          Length = 271

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 241 LGPFCSALFISQCSVATDFGLGFIIISL 158
           LG F +ALFI++C  A D   GF   SL
Sbjct: 93  LGTFLTALFIAEC--APDKNRGFACTSL 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,360,000
Number of Sequences: 27780
Number of extensions: 132738
Number of successful extensions: 414
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)