Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1684
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 27 0.18
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 27 0.18
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 1.6
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 24 1.6
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.6
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 3.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 3.8
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 5.0
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 8.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 8.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 8.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 8.7
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.1 bits (57), Expect = 0.18
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 571 WKSISGPRTKRLQMIITKVSRLSAPYKANVFSGEISHISKHYTLT 705
W S P TK+L+ ++ + L P ++F +S ++H LT
Sbjct: 391 WSSFINPWTKKLEFVVGQHRILKGPANPDIF--RVSCATEHSQLT 433
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 27.1 bits (57), Expect = 0.18
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 571 WKSISGPRTKRLQMIITKVSRLSAPYKANVFSGEISHISKHYTLT 705
W S P TK+L+ ++ + L P ++F +S ++H LT
Sbjct: 97 WSSFINPWTKKLEFVVGQHRILKGPANPDIF--RVSCATEHSQLT 139
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 99 IPRSYRDSDLKMGNHSE 49
+PR + D++ K+GNH +
Sbjct: 510 LPRIHHDAEWKVGNHED 526
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 99 IPRSYRDSDLKMGNHSE 49
+PR + D++ K+GNH +
Sbjct: 425 LPRIHHDAEWKVGNHED 441
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 99 IPRSYRDSDLKMGNHSE 49
+PR + D++ K+GNH +
Sbjct: 744 LPRIHHDAEWKVGNHED 760
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -1
Query: 415 TIFVCLSVCLFRLISGTAGPILTR 344
++FV LS+ F +++ GP+ T+
Sbjct: 284 SVFVFLSLMEFAVVNNYMGPVATK 307
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 466 YFNITNRHSNFIYMYRLSVTCEEV 537
+FNIT R Y L V C +
Sbjct: 226 FFNITLRRKTLFYTVNLIVPCVSI 249
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.2 bits (45), Expect = 5.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 629 DTLVIII*SLLVRGPDILFQLRSPL*HFLECTS 531
D ++ + +LL R + +LRS L FL+C S
Sbjct: 15 DEKIVELEALLCRRDAEIQELRSHLDKFLQCAS 47
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 535 PLHTLRLIYTY 503
P HT RL+Y Y
Sbjct: 285 PFHTQRLLYVY 295
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 371 WNGWTDFDET 342
WN W D+ ET
Sbjct: 696 WNKWNDWQET 705
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 371 WNGWTDFDET 342
WN W D+ ET
Sbjct: 696 WNKWNDWQET 705
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 371 WNGWTDFDET 342
WN W D+ ET
Sbjct: 696 WNKWNDWQET 705
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,558
Number of Sequences: 438
Number of extensions: 3731
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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