Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1682
(547 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 106 2e-24
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 47 2e-06
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 45 6e-06
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 45 8e-06
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 42 4e-05
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 42 8e-05
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 41 1e-04
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 40 3e-04
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 38 7e-04
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 38 0.001
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 37 0.002
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 36 0.003
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 36 0.003
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 35 0.007
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 35 0.007
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 34 0.012
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 33 0.021
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 33 0.027
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 32 0.048
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 31 0.084
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 31 0.084
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 31 0.084
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 31 0.15
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 30 0.26
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 29 0.45
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 29 0.59
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 29 0.59
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 28 0.78
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 28 0.78
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 28 0.78
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 27 1.4
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 27 1.4
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 27 1.8
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 27 2.4
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 27 2.4
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 2.4
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 3.2
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 26 4.2
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 26 4.2
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 26 4.2
SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|c... 25 5.5
SPAC4F10.18 |||WD repeat protein, human NUP37 family|Schizosacch... 25 5.5
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 25 5.5
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 25 5.5
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 25 7.3
SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cu... 25 7.3
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 25 7.3
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 25 7.3
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 25 7.3
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 7.3
SPCC1020.09 |||WD repeat protein, human WDR79 family|Schizosacch... 25 9.6
SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.6
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 25 9.6
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 25 9.6
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 106 bits (254), Expect = 2e-24
Identities = 52/114 (45%), Positives = 71/114 (62%)
Frame = +2
Query: 203 SQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKT 382
S +S + + KDVEV+ PP+D++S L FSP + +L A SWD +VR +EV+ +G++
Sbjct: 10 STVSNATGDLKKDVEVAQPPEDSISDLAFSPQA----EYLAASSWDSKVRIYEVQATGQS 65
Query: 383 VPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVK 544
+ KA GPVL V W DGTKV S DKS K +D+ Q QVAAHD V+
Sbjct: 66 IGKALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAVR 119
Score = 25.0 bits (52), Expect = 7.3
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +2
Query: 263 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGK----TVPKAAQPMD--GPVLD 424
DD V + F T L GSWD ++ W++ S ++P+ MD P+L
Sbjct: 115 DDAVRCVRFVEAMGT-SPILATGSWDKTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLT 173
Query: 425 VA 430
VA
Sbjct: 174 VA 175
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 47.2 bits (107), Expect = 2e-06
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = +2
Query: 272 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 451
VS+++F+P L T L++GSWD VR W ++ T + P++ V+ DGT
Sbjct: 141 VSSIDFNP----LGTLLVSGSWDETVRIWNLQDG--TCLRMLPAHSEPIISVSISADGTL 194
Query: 452 VFMASTDKSVKCWDLAANQTMQ 517
AS D + WD+ + Q ++
Sbjct: 195 CATASYDGMARIWDVLSGQCLK 216
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 45.2 bits (102), Expect = 6e-06
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +2
Query: 242 VEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVL 421
+E + + VS+L F+ + L +GSWD VR W++ + V P D VL
Sbjct: 460 LETLAGHEGPVSSLSFNSSG----SLLASGSWDKTVRIWDIFSRSGIVEPLPIPSD--VL 513
Query: 422 DVAWHDDGTKVFMASTDKSVKCWDL 496
+A+H DG +V +AS D + W++
Sbjct: 514 SLAFHPDGKEVCVASLDGQLTFWNV 538
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 44.8 bits (101), Expect = 8e-06
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +2
Query: 272 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 451
+S L F P S L L++GS D Q++ WEV +++ + Q P+ D+++ DG
Sbjct: 269 ISCLRFFPISGHL---LLSGSMDNQIKIWEVYHD-RSLLRTFQGHARPIRDLSFSQDGRS 324
Query: 452 VFMASTDKSVKCWD 493
S DK++K WD
Sbjct: 325 FLSTSFDKTIKLWD 338
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 42.3 bits (95), Expect = 4e-05
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 314 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 493
T L++GS DC V+ W + GK + + GPV V D V S D ++K W
Sbjct: 364 TLLVSGSADCTVKLWHF-SGGKRI--TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWS 420
Query: 494 LAANQTMQV-AAHDAPVKT 547
L N + +AH PV++
Sbjct: 421 LETNTCLHTFSAHIGPVQS 439
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/71 (19%), Positives = 29/71 (40%)
Frame = +2
Query: 308 LHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKC 487
+ L +GS+D +R W + T + L D K+ S DK+++
Sbjct: 282 VRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF----DQCKLISGSMDKTIRI 337
Query: 488 WDLAANQTMQV 520
W+ ++ + +
Sbjct: 338 WNYRTSECISI 348
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 41.5 bits (93), Expect = 8e-05
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 314 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 493
T++ G D QVR W+ T + + A + +D ++ ++WH G + D S+ W
Sbjct: 117 TYIATGGMDSQVRLWKSSTGFEFIT-AFETVD-EIVWLSWHPKGLFLAAGCNDGSIWMWS 174
Query: 494 LAANQTMQVA-AHDAPV 541
L + + +QV H APV
Sbjct: 175 LPSGKVVQVMYGHTAPV 191
Score = 29.5 bits (63), Expect = 0.34
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 251 SSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVA 430
S P + V +F P + +L+ DC +R W+V SG+ + + + P+L +A
Sbjct: 322 SLPHEQAVIDCKFLPNT----PYLLTACADCVIRKWDVR-SGQLLGEYTGHQE-PILCMA 375
Query: 431 WHDDGTKVFMASTDKSVKCWD 493
DG +V S D + +D
Sbjct: 376 ITPDGKRVVTGSDDTELLVFD 396
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 266 DTVSALEFSPPSVTLHTFLIA-GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDD 442
D+V ++ +P +H+ L A G D W++ T+G+ + + D ++ + W D
Sbjct: 62 DSVFSVSINP----VHSNLCASGGGDDLGYIWDI-TTGEQICQLTGHKDS-IVAIDWSFD 115
Query: 443 GTKVFMASTDKSVKCW 490
GT + D V+ W
Sbjct: 116 GTYIATGGMDSQVRLW 131
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 40.7 bits (91), Expect = 1e-04
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +2
Query: 233 NKDVEVSSPPDDTVSALEFS-PPSVTLHTFLIAGSWDCQVRCWE-VETSGKTVPKA-AQP 403
+ V +S+ D+TV +F P TL +F + S + + E +G P +
Sbjct: 208 SSSVFISASADNTVGIWDFERSPETTLESFSSSISKKRRRKNAEFTPQAGARSPLILCEG 267
Query: 404 MDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPV 541
GPV+D+ + DD + + D ++K WDL Q + AP+
Sbjct: 268 HTGPVMDIVFSDDPSVAYSVGQDHTIKTWDLITGQNVDSKITKAPL 313
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 39.5 bits (88), Expect = 3e-04
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 317 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 496
+ ++ SWD +R W++E T D VL V+ D +V S DK++K W++
Sbjct: 77 YALSASWDKTIRLWDLEKGECTHQFVGHTSD--VLSVSISPDNRQVVSGSRDKTIKIWNI 134
Query: 497 AAN 505
N
Sbjct: 135 IGN 137
Score = 35.5 bits (78), Expect = 0.005
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +2
Query: 266 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDG 445
D VS + FSP L TF+ AG WD V+ W++ET ++ + G V V DG
Sbjct: 149 DWVSCVRFSPNPDNL-TFVSAG-WDKAVKVWDLETF--SLRTSHYGHTGYVSAVTISPDG 204
Query: 446 TKVFMASTDKSVKCWDL 496
+ D ++ WDL
Sbjct: 205 SLCASGGRDGTLMLWDL 221
Score = 30.3 bits (65), Expect = 0.19
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP---VLDVAWHDDGTKVFMASTDKSVKCW 490
L++GS D + W + A + + G V D A D AS DK+++ W
Sbjct: 31 LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLW 90
Query: 491 DLAANQ-TMQVAAHDAPV 541
DL + T Q H + V
Sbjct: 91 DLEKGECTHQFVGHTSDV 108
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +2
Query: 272 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKT-------VPKAAQPMDGPVLDVA 430
++AL FSP + + + + +R +++ET K V + + + +
Sbjct: 236 INALVFSP-----NRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLT 290
Query: 431 WHDDGTKVFMASTDKSVKCWDL 496
W DG +F TD ++ W +
Sbjct: 291 WSPDGQTLFSGWTDNLIRVWQV 312
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 38.3 bits (85), Expect = 7e-04
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +2
Query: 263 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDD 442
++ V+A+ SP F+ GS D +R W V SG V + + V +A+ D
Sbjct: 443 ENGVTAIAISPND----QFIAVGSLDQIIRVWSV--SGTLVERLEGHKES-VYSIAFSPD 495
Query: 443 GTKVFMASTDKSVKCWDLAANQTMQVAA 526
+ + S DK++K W+L A +++ ++A
Sbjct: 496 SSILLSGSLDKTIKVWELQATRSVGLSA 523
Score = 32.7 bits (71), Expect = 0.036
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 317 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 496
F+++GS D R W+VET G+ + K ++ V +A + + + S D+ ++ W +
Sbjct: 416 FIVSGSGDRTARLWDVET-GQCILKL--EIENGVTAIAISPNDQFIAVGSLDQIIRVWSV 472
Query: 497 AANQTMQVAAHDAPV 541
+ ++ H V
Sbjct: 473 SGTLVERLEGHKESV 487
Score = 31.9 bits (69), Expect = 0.063
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Frame = +2
Query: 266 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQP-------MDGP--- 415
++V ++ FSP S + L++GS D ++ WE++ + A +P G
Sbjct: 485 ESVYSIAFSPDS----SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDF 540
Query: 416 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQT 511
VL VA D S D+S++ WDL Q+
Sbjct: 541 VLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQS 572
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 37.9 bits (84), Expect = 0.001
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 323 IAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAA 502
+A + + VR +++ TS + + V +A+H DG + +S D +VK WD+ A
Sbjct: 55 LAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRA 114
Query: 503 NQTMQVAAHDAPV 541
+ H +PV
Sbjct: 115 PSVQRNYDHKSPV 127
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 499
L +GS D +R W V+T + + + G +L + + GT+V A+ D VK W L+
Sbjct: 522 LASGSGDRTIRIWNVDT--QQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLS 579
Query: 500 ANQ 508
+ +
Sbjct: 580 SGE 582
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 440 DGTKVFMASTDKSVKCWDLAANQTMQV 520
DG + AS DK++K WD + + + V
Sbjct: 476 DGRIIASASQDKTIKLWDSSTGEVVGV 502
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 203 SQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVE--TSG 376
S++ N ++ + V + L F P +FL++GS D V+ W ++ ++
Sbjct: 169 SRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTG----SFLLSGSRDKTVQVWNIKKRSAV 224
Query: 377 KTVP 388
+T+P
Sbjct: 225 RTIP 228
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 36.3 bits (80), Expect = 0.003
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2
Query: 305 TLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVK 484
T L + S D ++ W+ E K V + MD ++++ DGT++ S DK V+
Sbjct: 145 TAANVLASSSADNTIKLWDCE---KGVAHVSLKMDVMCQSMSFNADGTRLVTTSRDKKVR 201
Query: 485 CWDLAANQTMQVAAHDAPVK 544
WD ++ + V A K
Sbjct: 202 VWDPRTDKPVSVGNGHAGAK 221
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 36.3 bits (80), Expect = 0.003
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +2
Query: 263 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDD 442
D T+ + +FSP + + L+ GS D R W+ +T +T + V VAW D
Sbjct: 134 DGTIISAQFSPSTSSR---LVTGSGDFTARLWDCDT--QTPIATMKGHTNWVSCVAWAPD 188
Query: 443 GTKVFMASTDKSVKCWD 493
+ + S D +++ WD
Sbjct: 189 ASIIATGSMDNTIRFWD 205
Score = 31.9 bits (69), Expect = 0.063
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW 490
L++ S D ++ W+V + K + + V V W DG +V DK+V+ W
Sbjct: 446 LVSSSQDTTLKVWDVRS--KKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 31.1 bits (67), Expect = 0.11
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +2
Query: 272 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 451
V+ FSP + T S+D VR W+ +T GK + + V AW D
Sbjct: 392 VNHASFSPDGRCIAT----ASFDSSVRLWDGKT-GKFLATLRGHV-AAVYQCAWSTDSRL 445
Query: 452 VFMASTDKSVKCWDLAANQ 508
+ +S D ++K WD+ + +
Sbjct: 446 LVSSSQDTTLKVWDVRSKK 464
Score = 30.3 bits (65), Expect = 0.19
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 499
L +GS D VR W V+ +T+ P+ V W ++ +S DK+++ WD
Sbjct: 242 LASGSKDNTVRIWNVKL--RTLLFTLSGHTAPITCVRWGGQNW-IYSSSYDKTIRIWDAK 298
Query: 500 ANQTMQV 520
+ + +
Sbjct: 299 DGKCLHI 305
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 35.1 bits (77), Expect = 0.007
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 499
L++GS+D +R W V T + + V + + S DKS++ WDL+
Sbjct: 520 LVSGSYDSSIRIWRVSTGECLYHLRGHSL--RIYSVLYEPERNICISGSMDKSIRVWDLS 577
Query: 500 ANQTMQV-AAHDA 535
V HDA
Sbjct: 578 TGTCKYVLEGHDA 590
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 35.1 bits (77), Expect = 0.007
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 317 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCW 490
+L++ S D R W V+T KT A + GPV DVA+ G AS D++ + W
Sbjct: 393 YLLSCSEDASARLWSVDT--KTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLW 448
Score = 34.3 bits (75), Expect = 0.012
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 12/105 (11%)
Frame = +2
Query: 263 DDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMD----------- 409
++ ++ EFSP S T + G + +R W ++ K++PK+ D
Sbjct: 324 NNNMNCAEFSPDS----TMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHS 379
Query: 410 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTM-QVAAHDAPV 541
GPV + D + S D S + W + + H PV
Sbjct: 380 GPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPV 424
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 425 VAWHDDGTKVFMASTDKSVKCWDLAANQTMQV-AAHDAPV 541
V +H + V S+DK+ + WD+ +++V H PV
Sbjct: 469 VTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPV 508
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 314 TFLIAGSWDCQVRCWEV 364
T L++G DC VR W+V
Sbjct: 560 TVLVSGGSDCTVRAWDV 576
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 34.3 bits (75), Expect = 0.012
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 499
L + S DC ++ W+ + K K + P+ VA GT+VF+ D ++K WDL
Sbjct: 151 LTSVSDDCTMKVWD--SRSKDCIKTIEEKY-PLTAVAIAQQGTQVFIGGIDGAIKIWDLR 207
Query: 500 ANQTMQV 520
N V
Sbjct: 208 NNHCSHV 214
Score = 26.2 bits (55), Expect = 3.2
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPV-------LDVAWHDDGTKVFMASTDKS 478
L++ S D VR ++V+ + + Q +G + L VAW + V S+DK+
Sbjct: 234 LLSNSMDNTVRIFDVKPFA-SAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKN 292
Query: 479 VKCWDLAANQTMQVAAHDAPV 541
V W + + H+ V
Sbjct: 293 VYVWSATGDLRYVLPGHEGSV 313
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 33.5 bits (73), Expect = 0.021
Identities = 24/86 (27%), Positives = 37/86 (43%)
Frame = +2
Query: 272 VSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTK 451
V AL+ P TL + AG D R W++ T + V +A + +
Sbjct: 250 VYALKLHP---TLDVLVTAGR-DAVARVWDMRTRQNVHVLSGHK--STVASLAVQEFDPQ 303
Query: 452 VFMASTDKSVKCWDLAANQTMQVAAH 529
V S D +++ WDLAA +T+ H
Sbjct: 304 VVTGSMDSTIRLWDLAAGKTLTTLTH 329
Score = 32.3 bits (70), Expect = 0.048
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +2
Query: 269 TVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGT 448
TV L SP H +L + D V+CW++ET+ K + + G V + H
Sbjct: 207 TVRGLAVSPR----HPYLFSCGEDKMVKCWDLETN-KVIRHYHGHLSG-VYALKLHPTLD 260
Query: 449 KVFMASTDKSVKCWDLAANQTMQV-AAHDAPV 541
+ A D + WD+ Q + V + H + V
Sbjct: 261 VLVTAGRDAVARVWDMRTRQNVHVLSGHKSTV 292
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 33.1 bits (72), Expect = 0.027
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +2
Query: 317 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 496
+L++ S+D R W+V T + + + +G + +A DG+ V D + WDL
Sbjct: 279 YLVSASFDTTWRLWDVHTGVELLMQEGHS-EG-IFSIACQPDGSLVSSGGNDAIGRIWDL 336
Query: 497 AANQTMQV 520
+ +++ V
Sbjct: 337 RSGKSIMV 344
Score = 31.9 bits (69), Expect = 0.063
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 326 AGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 496
+G D R W++ SGK++ + + ++ +AW +G ++ +S D +VK WDL
Sbjct: 324 SGGNDAIGRIWDLR-SGKSIMVLDEHIR-QIVAMAWSPNGYQLATSSADDTVKIWDL 378
Score = 25.8 bits (54), Expect = 4.2
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Frame = +2
Query: 188 STMFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSP-----PSVTLHTFLIAGSWDCQVR 352
S +G Q+ +++ +V++ D VS L++ P + + L G+ D V
Sbjct: 189 SGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVC 248
Query: 353 CWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 496
W+ S T + V VA+H G + AS D + + WD+
Sbjct: 249 LWKASQS--TPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDV 294
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 32.3 bits (70), Expect = 0.048
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 407 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQT 511
+GPVL V +F D +++CW L ANQT
Sbjct: 339 EGPVLCVCVPKATHHIFSGGHDGTIRCWSLPANQT 373
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 31.5 bits (68), Expect = 0.084
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 398 QPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAAN 505
Q DG + D+A DGT AS D +VK W L ++
Sbjct: 474 QAHDGAIWDLAVGHDGTYFATASADHTVKLWSLKSS 509
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 31.5 bits (68), Expect = 0.084
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 299 SVTLHTFLIA-GSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDK 475
S+ + +IA G ++ W+ S K + D V D+ DDG + AS+D
Sbjct: 181 SLAANNNIIANGGLQKDIQLWDC-VSKKRITDLVGHTDN-VRDILISDDGRTILTASSDA 238
Query: 476 SVKCWDLAANQTM 514
++K W L A + +
Sbjct: 239 TIKLWSLRAQKCL 251
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPM------DGPVLDVAWHDDGTKVFMASTDKSV 481
L +G D Q+ W++ G KA+QP+ V D+A D V S+D +V
Sbjct: 47 LYSGGRDGQLFGWDI---GYDYGKASQPLAKIQAHSAWVNDIALTHDSEGVISCSSDSTV 103
Query: 482 KCW 490
K W
Sbjct: 104 KLW 106
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 31.5 bits (68), Expect = 0.084
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +2
Query: 314 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 493
T L++G +D +R W+ + P+ G +DV +++ S+K WD
Sbjct: 178 TRLVSGGYDGTIRLWDTRIAD---PEVMSFSHGEAIDVVLPMQSGSTVISAGGPSIKVWD 234
Query: 494 LAANQ 508
L A +
Sbjct: 235 LVAGR 239
Score = 26.2 bits (55), Expect = 3.2
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMA-STDKSVKCWDL 496
L+AG V+ +++ T +++ +A PV + F++ S DK+VK WDL
Sbjct: 96 LLAGDATGLVQIFDLST--RSILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDL 153
Query: 497 AANQTM-QVAAHDAPVKT 547
+ ++ H+ V+T
Sbjct: 154 STGAVQYDLSGHEDYVRT 171
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 30.7 bits (66), Expect = 0.15
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 317 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 496
+LI+G V+ +E + K Q + V DVA+ + +K AS D S+K W+
Sbjct: 137 WLISGDGGGMVKYFEPNLNNV---KIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNF 193
Query: 497 -AANQTMQVAAHDAPVKT 547
+ + +++ H VKT
Sbjct: 194 HMSTEELKLTGHGWDVKT 211
Score = 25.0 bits (52), Expect = 7.3
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = +2
Query: 230 PN-KDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPM 406
PN +V++ + V + FSP + + S D ++ W S + +
Sbjct: 152 PNLNNVKIVQAHEMEVRDVAFSPND----SKFVTASDDGSLKVWNFHMSTEELKLTGHGW 207
Query: 407 DGPVLDVAWHDDGTKVFMASTDKSVKCWD 493
D +D WH + S D VK WD
Sbjct: 208 DVKTVD--WHPSKGLLASGSKDNLVKFWD 234
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 29.9 bits (64), Expect = 0.26
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 410 GPVLDVAWHDDGTKVFMASTDKSVKCWDL 496
GPV D+A + DG + A D +K WDL
Sbjct: 266 GPVRDLAVNRDGRYMVTAGADSLLKVWDL 294
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 29.1 bits (62), Expect = 0.45
Identities = 18/96 (18%), Positives = 37/96 (38%)
Frame = +2
Query: 236 KDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGP 415
KD +P + + P L+ +D +R ++++ + +
Sbjct: 208 KDANFQAPSHSGIRCMSIHP----YFPLLLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSA 263
Query: 416 VLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVA 523
+ +H DG +V A K + WDL + Q +V+
Sbjct: 264 LQTALFHPDGKRVIAAGRRKYMYIWDLESAQVQKVS 299
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 28.7 bits (61), Expect = 0.59
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +2
Query: 416 VLDVAWHDDGTKVFMA-STDKSVKCWDL 496
V D+ WH V S D SV CWDL
Sbjct: 325 VTDMNWHRQNPDVLATCSIDSSVHCWDL 352
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 28.7 bits (61), Expect = 0.59
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 499
+ GSWD ++ W V T G+ V D + ++G + STD S+ WD++
Sbjct: 105 IYTGSWDHTIKKWNVST-GECVETLIGHTDYVKCLLLLEEEGL-LLSGSTDASLIVWDVS 162
Query: 500 A 502
+
Sbjct: 163 S 163
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 28.3 bits (60), Expect = 0.78
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = +2
Query: 305 TLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVK 484
TL L AG D V+ W + S + V +H + AS DK+++
Sbjct: 223 TLPLILSAGD-DRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIR 281
Query: 485 CWDLAANQTMQVAAHD 532
WDL +Q D
Sbjct: 282 VWDLNRRTAVQTFRRD 297
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 416 VLDVAWHDDGTKVFMASTDKSVKCWDLA 499
V+ A+H + AS D++V+ WD++
Sbjct: 140 VMCAAFHPSEDLIVSASLDQTVRVWDIS 167
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 28.3 bits (60), Expect = 0.78
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 392 AAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAA 502
A P VL +WH +G + D + K WD+ A
Sbjct: 295 AKLPHSDSVLTGSWHPNGNILATGGQDTTAKVWDIRA 331
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 28.3 bits (60), Expect = 0.78
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFM-ASTDKSVKCWDL 496
+I GSWD R W + K V K Q VL + G +F+ S DK +K W+
Sbjct: 112 IITGSWDSTARVWALGQC-KYVLKGHQSSVWAVLAL-----GEDIFITGSADKLIKIWN- 164
Query: 497 AANQTMQVAAHDAPVKT 547
+ AH+ V++
Sbjct: 165 GEKLVKSILAHNDCVRS 181
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 266 DTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVE 367
D V+++ F P F ++GS DC++R W ++
Sbjct: 350 DFVTSIAFHPKD---DRFFLSGSLDCKLRLWSIK 380
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 434 HDDGTKVFMASTDKSVKCWDLA 499
H GT + ASTDK+VK WD+A
Sbjct: 342 HPFGT-LATASTDKTVKVWDMA 362
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLA 499
L +GS+D VR W++ + P PM+ V + + ++ +AS + +V+ +D
Sbjct: 549 LYSGSYDNSVRIWDLRSGS---PINIIPMEKKVNSLRLYQG--RLAVASDEPNVRIFDTV 603
Query: 500 ANQ 508
+N+
Sbjct: 604 SNR 606
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 317 FLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDL 496
+++A + VR W V+ SG + + A +LD+ D TK DK ++ WD+
Sbjct: 28 YVLAAGNERVVRLWNVK-SGACIHEYAGH-GHEILDLDLVYDSTKFASCGGDKFIQVWDV 85
Query: 497 AANQT-MQVAAHDAPVKT 547
+ ++ H A + T
Sbjct: 86 NTGKVDRRLGGHLAQINT 103
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.6 bits (56), Expect = 2.4
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +2
Query: 332 SWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAW-HDD-GTKVFMASTDKSVKCWDLAA- 502
S D ++ + +E + +T+ + + GPV + W H GT + AS D V W
Sbjct: 28 SSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGG 87
Query: 503 --NQTMQVAAHDAPV 541
++ M AH A V
Sbjct: 88 VWSELMDHTAHQASV 102
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 422 DVAWHDDGTKVFMASTD 472
D+AW+DDG + M S D
Sbjct: 424 DIAWNDDGNVLLMTSID 440
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 416 VLDVAWHDDGTKVFMASTDKSVKCWDLAAN-QTMQVAAHDAPVK 544
V +AW DG ++ D V+ WD ++ H+A VK
Sbjct: 307 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVK 350
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 443 GTKVFMASTDKSVKCWDLAANQTMQV 520
G + STD++V+ WDL + QV
Sbjct: 456 GDTLVTGSTDRTVRVWDLRTGECKQV 481
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +2
Query: 398 QPMDGPVLDVAWHDDGTKVFMASTDKSVKCWD 493
Q GP+ + W+ G+++ +S+ SV W+
Sbjct: 21 QGQQGPIRSLGWNLSGSRLASSSSSGSVLVWN 52
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 320 LIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVF-MASTDKSVKCWDL 496
++ GSWD ++ W + +V + +L VA H + S+D K WD
Sbjct: 119 VVTGSWDGTIKLW-LGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDF 177
Query: 497 AAN 505
++
Sbjct: 178 RSS 180
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 25.8 bits (54), Expect = 4.2
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 314 TFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHD-DGTKVFMASTDKSVKCW 490
TF+++GS D ++R W E SGK + + + V VA++ D + A D +V+ W
Sbjct: 441 TFVLSGSEDDKIRIWHRE-SGKLLATLSGHVK-CVNYVAYNPVDPYQFASAGDDNTVRIW 498
Query: 491 DLAANQTMQ 517
N Q
Sbjct: 499 SNKDNPRRQ 507
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = +2
Query: 425 VAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAH 529
+ W D + S DKSV WD + ++ H
Sbjct: 261 IRWSPDDRYLLSCSCDKSVILWDAFTGEKLRDYKH 295
>SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 212 STGSNNPNKDVEVSSPPDDTVSALE 286
S S +P + VS PP +T SALE
Sbjct: 19 SNDSEHPFEHTRVSIPPSETRSALE 43
>SPAC4F10.18 |||WD repeat protein, human NUP37
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 413 PVLDVAWHDDGTKVFMASTDKSV 481
P++D WH DG+ + +A T+ SV
Sbjct: 359 PIVDFCWHQDGSHLAIA-TEGSV 380
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 308 LHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSV 481
L I+GSWD R W+V + QP++G D G K+F +S+ ++
Sbjct: 106 LENCFISGSWDKSFRVWDV--------RVKQPVEG-------QDIGKKIFASSSRDNI 148
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 376 PRSFHFPTSHLAVPAASDQEGVQSDGGRRELE 281
P F P+S P+ASD E V DG EL+
Sbjct: 4 PLRFSTPSSS---PSASDNESVHDDGPTTELD 32
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 407 DGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQ 508
+G VL V + +G + DK+++ WD +N+
Sbjct: 221 NGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNK 254
>SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cuf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.0 bits (52), Expect = 7.3
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = -2
Query: 186 FYKPTNKPTI--YSYKFV*EHKKNDNFVSAMFS--YYR*INVYRILYSINTQGEGSAAA 22
+ +PTN P Y+Y +H + +A++ YR + Y+ILY+ NT +AAA
Sbjct: 193 YQQPTNFPPEIQYNYSHSPQHSIQEAEEAAVYGPPVYR--SGYQILYNNNTDSIAAAAA 249
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +2
Query: 410 GPVLDVAWHDDGTKVFMASTDKSVKCWD 493
G + ++W D ++ +S S K WD
Sbjct: 232 GSIFSISWSPDSSQFVTSSAGYSCKIWD 259
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 25.0 bits (52), Expect = 7.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 311 HTFLIAG-SWDCQVRCWEVET-SGKTVP-KAAQPMDGPVLDVAWHDDGTKVFMA-STDKS 478
H L+A S+D + ++ T P ++ GP+ VA++ + STDK+
Sbjct: 246 HQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKT 305
Query: 479 VKCWDL 496
+ WDL
Sbjct: 306 IALWDL 311
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 407 DGPVLDVAWHDDGTKVFMASTD-KSVKCWDLAANQTMQV 520
DG VL ++ DGT + +S + WDL+ + V
Sbjct: 245 DGQVLSCSFRTDGTPILASSNPIGDLSFWDLSKRRIQNV 283
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 491 PNTSHFCLLKP*KPSSHHHARRHLGPVHP 405
PNTS L P K ++ + H P+HP
Sbjct: 53 PNTSFTSLFGPRKQTTSSPSFSHAAPLHP 81
>SPCC1020.09 |||WD repeat protein, human WDR79
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 399
Score = 24.6 bits (51), Expect = 9.6
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +2
Query: 431 WHDDGTKVFMASTDKSVKCWDL 496
W DG+ + + D+ + CW++
Sbjct: 54 WSPDGSTILSLTEDQCLNCWNV 75
>SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 300
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 334 LGLPSEMLGSGNFGENSA*GCTAYGWTGPRCRL 432
LG+ S MLG G N A G Y GP R+
Sbjct: 128 LGVASVMLGFLAHGMNKAYGWVIYKKIGPELRM 160
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 219 PVLI*LPNIVLFYKPTNKPTIYSYKFV 139
PV I PNI L+ KPT P I S+ V
Sbjct: 61 PVCIYPPNIYLYAKPT-MPIIQSFDVV 86
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 410 GPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAP 538
G + D+ DG + AST+ + WDL + + +VA +AP
Sbjct: 22 GKIPDIDISTDGKYLLSASTNDVLLVWDL--HTSNKVAFFEAP 62
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,301,266
Number of Sequences: 5004
Number of extensions: 48802
Number of successful extensions: 257
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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