Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1682
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   3.8  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   5.0  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   5.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.6  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   6.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.7  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 168 KPTIYSYKFV*EHKKNDNFVSAM 100
           +PT + Y+F+  H +N+N +SA+
Sbjct: 699 RPTTFGYRFIELHLENNN-ISAL 720


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 495 KSQHFTLLSVEAIKTFVPSSCQATSRT 415
           +S+H+    +  +  F PSS Q++S T
Sbjct: 649 RSKHYISAEMRTVLIFAPSSNQSSSST 675


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -1

Query: 388 RHCFPRSFHFPTSHLAVPAASDQEGVQSDGGRRE-LEGR-HGVIGRRGNLHVLVGVV 224
           R C   S + PTS      +   E   S GG+RE L+ +  G + +       VGVV
Sbjct: 215 RDCPMESNNTPTSTTMRDYSRKNENCSSSGGQRESLKPKPKGKVAKSSEFSFTVGVV 271


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 527 APLPASFGWLLSPNTSHFCLLKP*KPSS 444
           AP PA++G + SP+++   +  P   SS
Sbjct: 268 APSPATYGDIASPSSASSAMTTPATTSS 295


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 527 APLPASFGWLLSPNTSHFCLLKP*KPSS 444
           AP PA++G + SP+++   +  P   SS
Sbjct: 268 APSPATYGDIASPSSASSAMTTPATTSS 295


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 295 RRELEGRHGVIGRRGNLHVL 236
           +R L+GR  V GR+G  HV+
Sbjct: 74  QRTLDGRLQVAGRKGFPHVI 93


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 173 PTNQQFTLTNLFENTKKTIILYLQCLVIID 84
           P+  + T T     +KKT+IL    ++I+D
Sbjct: 420 PSTSRLTATAQANCSKKTVILSTAQIIILD 449


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = -1

Query: 376 PRSFHFPTSHLAVPAASDQEGVQSDGGRRELEGRHGVIGRRGN 248
           PR +         P    + G+  + G   L G  G+ GR+G+
Sbjct: 416 PRGYDGEKGFKGEPGRIGERGLMGEKGDMGLTGPVGLSGRKGD 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,709
Number of Sequences: 2352
Number of extensions: 13619
Number of successful extensions: 38
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)