Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1674
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 249 2e-66
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 249 2e-66
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 249 2e-66
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 249 2e-66
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 249 2e-66
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 249 2e-66
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 249 2e-66
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 249 2e-66
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 249 2e-66
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 243 1e-64
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 237 5e-63
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 127 6e-30
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 7e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 102 3e-22
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 89 3e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 83 1e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 66 3e-11
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.56
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.56
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.56
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.9
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 6.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.9
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 6.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 249 bits (609), Expect = 2e-66
Identities = 116/128 (90%), Positives = 121/128 (94%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 250 TVGNERFRCPEAM-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 249 bits (609), Expect = 2e-66
Identities = 116/128 (90%), Positives = 121/128 (94%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 250 TVGNERFRCPEAL-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 249 bits (609), Expect = 2e-66
Identities = 116/128 (90%), Positives = 121/128 (94%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 250 TVGNERFRCPEAM-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 249 bits (609), Expect = 2e-66
Identities = 116/128 (90%), Positives = 121/128 (94%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 250 TVGNERFRCPEAL-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 249 bits (609), Expect = 2e-66
Identities = 116/128 (90%), Positives = 121/128 (94%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 250 TVGNERFRCPEAL-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 249 bits (609), Expect = 2e-66
Identities = 116/128 (90%), Positives = 121/128 (94%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 250 TVGNERFRCPEAM-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 249 bits (609), Expect = 2e-66
Identities = 116/128 (90%), Positives = 121/128 (94%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 206 TVGNERFRCPEAL-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 264
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 265 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 324
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 325 SIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 249 bits (609), Expect = 2e-66
Identities = 116/128 (90%), Positives = 121/128 (94%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 236 TVGNERFRCPEAL-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 294
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 295 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 354
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 355 SIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 249 bits (609), Expect = 2e-66
Identities = 116/128 (90%), Positives = 121/128 (94%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 250 TVGNERFRCPEAL-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 243 bits (594), Expect = 1e-64
Identities = 115/128 (89%), Positives = 120/128 (93%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
T+GN+RF P FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 250 TVGNERFRCPEAM-FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 368 SIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 237 bits (580), Expect = 5e-63
Identities = 112/128 (87%), Positives = 117/128 (91%)
Frame = -2
Query: 659 TIGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
TIGN+RF P FQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+P
Sbjct: 249 TIGNERFRCPEVL-FQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFP 307
Query: 479 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 300
GIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 308 GIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 299 SIVHRKCF 276
SIVHRKCF
Sbjct: 368 SIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 127 bits (307), Expect = 6e-30
Identities = 60/127 (47%), Positives = 83/127 (65%)
Frame = -2
Query: 656 IGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 477
I N F P F+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G
Sbjct: 249 ISNSLFRAPEVL-FKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKG 307
Query: 476 IADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPS 297
DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S
Sbjct: 308 FGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGAS 367
Query: 296 IVHRKCF 276
+H++ F
Sbjct: 368 AMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (257), Expect = 7e-24
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -2
Query: 545 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 375
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 374 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 279
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 102 bits (244), Expect = 3e-22
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 13/131 (9%)
Frame = -2
Query: 656 IGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 477
+G +RF P FQP + +E G+ E + I D+D R D Y + VLSGGTTMYPG
Sbjct: 254 LGGERFEAPE-ILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPG 312
Query: 476 IADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQM 336
+ R++KE+ L A KI+I APP RK+ V++GG++LA+L Q
Sbjct: 313 LPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDF 372
Query: 335 WISKQEYDESG 303
W+SK+EY+E G
Sbjct: 373 WVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/113 (34%), Positives = 71/113 (62%)
Frame = -2
Query: 656 IGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 477
I N RF G F+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PG
Sbjct: 428 IDNSRFLCTEGL-FKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPG 486
Query: 476 IADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 318
IA+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 487 IAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 83.4 bits (197), Expect = 1e-16
Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 17/138 (12%)
Frame = -2
Query: 656 IGNKRFPLPRGFSFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 480
+G +RF P F F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 278 VGYERFLGPEIF-FHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFK 336
Query: 479 GIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLST 348
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 337 DFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSE 396
Query: 347 FQQMWISKQEYDESGPSI 294
F Q+ +K EY E GPSI
Sbjct: 397 FYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Frame = -2
Query: 656 IGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 477
+G +RF +P F PS + ++ CG+ E SI +C +R L N ++ GG++ +PG
Sbjct: 265 LGVERFAIPE-ILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPG 323
Query: 476 IADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 306
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 324 FRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDER 379
Query: 305 GPSIVHRKCF*T 270
G S+ F T
Sbjct: 380 GDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Frame = -2
Query: 656 IGNKRFPLPRGFSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 477
+G +RF +P F PS + ++ CG+ E SI +C +R L N ++ GG++ +PG
Sbjct: 265 LGVERFAIPE-ILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPG 323
Query: 476 IADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 306
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 324 FRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDER 379
Query: 305 GPSIVHRKCF*T 270
G S+ F T
Sbjct: 380 GDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 557 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 393
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 392 ----YSVWIGGSILASL-STFQQMWISKQEY 315
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 381 PYGVLPLWRSNDLNLHCRWGESCD 452
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 381 PYGVLPLWRSNDLNLHCRWGESCD 452
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 381 PYGVLPLWRSNDLNLHCRWGESCD 452
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 217 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 309
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 320 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 219
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 217 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 309
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 401 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 240
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,514,496
Number of Sequences: 27780
Number of extensions: 327428
Number of successful extensions: 903
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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