Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1673
         (386 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   1.1  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   1.8  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   1.8  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   5.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   5.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    20   9.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   9.8  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    20   9.8  

>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 174 GTRREEHHLLRNRP 133
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 174 GTRREEHHLLRNRP 133
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 174 GTRREEHHLLRNRP 133
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 272 PDPQIPHRTRNRH 310
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 341 MPNLLHVIPVSDDSVFD 291
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 341 MPNLLHVIPVSDDSVFD 291
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 341 MPNLLHVIPVSDDSVFD 291
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 341 MPNLLHVIPVSDDSVFD 291
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 65  KLVRCRCDKMKIKRPAVTANR 3
           K  R   D+ ++ RPA  ANR
Sbjct: 330 KRPRPNIDRHEVTRPAAPANR 350


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 176 LDRGKAPPSGRD 211
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 176 LDRGKAPPSGRD 211
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 174 GTRREEHHLLRNRP 133
           G R+   HL++N+P
Sbjct: 81  GVRKVIRHLIKNKP 94


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -3

Query: 204 PDGGAFPRSRGTRREEHHLLRNRPCT 127
           P G  F  ++  R+E      + PCT
Sbjct: 669 PSGDCFYENKFYRQEAQWTSSDNPCT 694


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 144 AGDDAPRAVFPSIVGRPRHQGVMVG 218
           AG  +PR    +   RP HQ    G
Sbjct: 62  AGFPSPRGALGAYPFRPMHQNSYTG 86


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 130 ARPVSQEMMLLAPCSPRSWEG 192
           A+P    +   AP  P  WEG
Sbjct: 7   AKPPLGHLRFKAPELPEHWEG 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,675
Number of Sequences: 336
Number of extensions: 2145
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)