Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1670
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127825-1|BAC87149.1| 207|Homo sapiens PROTEIN). protein. 36 0.11
BC027448-1|AAH27448.1| 85|Homo sapiens Unknown (protein for MG... 33 0.79
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 33 0.79
AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens ... 33 1.0
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 33 1.0
AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens ... 32 1.8
AF238374-1|AAF97749.1| 174|Homo sapiens mutant fibroblast growt... 32 1.8
AK130327-1|BAC85328.1| 131|Homo sapiens protein ( Homo sapiens ... 31 2.4
BC000122-1|AAH00122.1| 25|Homo sapiens FAM125B protein protein. 31 3.2
D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein. 31 4.2
AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein. 31 4.2
AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein. 31 4.2
AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein. 31 4.2
BC018658-1|AAH18658.1| 40|Homo sapiens REEP3 protein protein. 30 5.5
AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein. 30 7.3
AK026249-1|BAB15412.1| 160|Homo sapiens protein ( Homo sapiens ... 29 9.7
>AK127825-1|BAC87149.1| 207|Homo sapiens PROTEIN). protein.
Length = 207
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +2
Query: 401 VGMCVCICDCDCVYMY-TFCVCIR 469
V MC C+C C C+Y+Y CVC+R
Sbjct: 136 VCMCGCVCMCMCLYVYMCMCVCVR 159
>BC027448-1|AAH27448.1| 85|Homo sapiens Unknown (protein for
MGC:34919) protein.
Length = 85
Score = 33.1 bits (72), Expect = 0.79
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 492 CNEIYIKLRIHTQKVYIYTQSQSHIHTHI 406
C IY H VY+YT + +H HTH+
Sbjct: 41 CMYIYTHTYTHDYIVYVYTHTHTHTHTHV 69
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 407 MCVCICDCDCVYMYT-FCVCI 466
M C+C C VY+YT +CVC+
Sbjct: 1 MMYCLCVCVYVYIYTVYCVCV 21
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 33.1 bits (72), Expect = 0.79
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 410 CVCICDCDCVYMYTFCVCI 466
CVC+C C CV + CVC+
Sbjct: 11 CVCVCVCVCVLCVSVCVCV 29
Score = 31.9 bits (69), Expect = 1.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 401 VGMCVCICDCDCVYMYTFCVCI 466
V +CVC+C C CV + C+C+
Sbjct: 33 VCVCVCVCLCLCVLSVSVCLCV 54
Score = 31.1 bits (67), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 407 MCVCICDCDCVYMYTFCVCI 466
+CVC+C C CV ++ CVC+
Sbjct: 99 LCVCVCLCVCVCLH-LCVCV 117
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 401 VGMCVCICDCDCVYMYTF-CVCI 466
V +CVC+C C C+ + F CVC+
Sbjct: 149 VCLCVCVCLCVCLCLCVFLCVCV 171
Score = 29.5 bits (63), Expect = 9.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 401 VGMCVCICDCDCVYMYTFCVCI 466
V +CVC+ C CV + + C+C+
Sbjct: 50 VCLCVCVSVCLCVCLVSVCLCV 71
Score = 29.5 bits (63), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +2
Query: 401 VGMCVCICDCDCVYMYT---FCVCI 466
V +CVC+C C C+ ++ CVC+
Sbjct: 127 VSVCVCLCVCVCICVFVCVWVCVCL 151
>AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ12547 fis, clone NT2RM4000634. ).
Length = 307
Score = 32.7 bits (71), Expect = 1.0
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +2
Query: 407 MCVCICDCDCVYMYTF-CVC 463
+CVC+C C CV+ TF CVC
Sbjct: 139 LCVCLCVCACVWGCTFVCVC 158
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 401 VGMCVCICDCDCVYMYTFCVCIRNLI*ISLQVPLFTLHYLW 523
V +C C+C C CV CVC+ + L V L +W
Sbjct: 110 VCVCACVCGCLCVCGAHLCVCVCLCVGAHLCVCLCVCACVW 150
Score = 29.9 bits (64), Expect = 7.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 407 MCVCICDCDCVYMYTFCVC 463
+C C+C C CV+ CVC
Sbjct: 47 VCACVCGCLCVWGTFVCVC 65
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 32.7 bits (71), Expect = 1.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 401 VGMCVCICDCDCVYMYTFCVCIRNLI*ISLQVPLFTLHYLWL 526
V +CVCIC C V++ C+C+ + +S+ V + YL L
Sbjct: 35 VSVCVCICVCVSVFV-CVCICVCVCVCVSMCVSISVCVYLCL 75
>AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46559 fis, clone THYMU3040126. ).
Length = 303
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 410 CVCICDCDCVYMYT-FCVCIRNLI*ISLQVPLFTLHYLW 523
C C+C C + YT CVC+ I I + V ++T Y +
Sbjct: 68 CTCVCVCVHTHTYTCICVCVHTHIYIHMCVCVYTRIYTY 106
>AF238374-1|AAF97749.1| 174|Homo sapiens mutant fibroblast growth
factor receptor 3 protein.
Length = 174
Score = 31.9 bits (69), Expect = 1.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 404 GMCVCICDCDCVYMYTFCVCIR 469
G+CVC+C C CV + C C+R
Sbjct: 75 GLCVCVCVCVCV-CTSACACVR 95
>AK130327-1|BAC85328.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ26817 fis, clone PRS06446. ).
Length = 131
Score = 31.5 bits (68), Expect = 2.4
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 407 MCVCICDCDCVYMYTF 454
+CVC+C C CVY+Y +
Sbjct: 3 VCVCVCVCVCVYIYIY 18
Score = 29.5 bits (63), Expect = 9.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 407 MCVCICDCDCVYMYTF 454
MCVC+C C CV +Y +
Sbjct: 1 MCVCVCVCVCVCVYIY 16
>BC000122-1|AAH00122.1| 25|Homo sapiens FAM125B protein protein.
Length = 25
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 407 MCVCICDCDCVYMYTFCVC 463
MC+C+C C CVY+ CVC
Sbjct: 1 MCLCVCVCVCVYV---CVC 16
>D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein.
Length = 1630
Score = 30.7 bits (66), Expect = 4.2
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 202 GLITKISYMTLERDSQEVLPPVINMCTSISLI 297
G +TK++ + ++R+ E LPP I C ++S++
Sbjct: 309 GKLTKLTNLNVDRNHLEALPPEIGGCVALSVL 340
>AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein.
Length = 1630
Score = 30.7 bits (66), Expect = 4.2
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 202 GLITKISYMTLERDSQEVLPPVINMCTSISLI 297
G +TK++ + ++R+ E LPP I C ++S++
Sbjct: 309 GKLTKLTNLNVDRNHLEALPPEIGGCVALSVL 340
>AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein.
Length = 1601
Score = 30.7 bits (66), Expect = 4.2
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 202 GLITKISYMTLERDSQEVLPPVINMCTSISLI 297
G +TK++ + ++R+ E LPP I C ++S++
Sbjct: 280 GKLTKLTNLNVDRNHLEALPPEIGGCVALSVL 311
>AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein.
Length = 1630
Score = 30.7 bits (66), Expect = 4.2
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 202 GLITKISYMTLERDSQEVLPPVINMCTSISLI 297
G +TK++ + ++R+ E LPP I C ++S++
Sbjct: 309 GKLTKLTNLNVDRNHLEALPPEIGGCVALSVL 340
>BC018658-1|AAH18658.1| 40|Homo sapiens REEP3 protein protein.
Length = 40
Score = 30.3 bits (65), Expect = 5.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 407 MCVCICDCDCVYMYTFCVCI 466
MCVC+C C CV + CVCI
Sbjct: 1 MCVCVCVCVCVCV---CVCI 17
>AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein.
Length = 274
Score = 29.9 bits (64), Expect = 7.3
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +2
Query: 401 VGMCVCICDCDCVYM---YTFCVCI 466
V +CVC+C C CV++ CVC+
Sbjct: 12 VSLCVCVCACVCVHVGICMHACVCL 36
>AK026249-1|BAB15412.1| 160|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22596 fis, clone HSI03808. ).
Length = 160
Score = 29.5 bits (63), Expect = 9.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 404 GMCVCICDCDCVYMYTFCVCI 466
G+CVC+C C CV CVC+
Sbjct: 34 GVCVCVCVCVCV-----CVCV 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,656,367
Number of Sequences: 237096
Number of extensions: 1674866
Number of successful extensions: 6308
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6211
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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