Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1670
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001646-1|AAN71401.1|  641|Drosophila melanogaster RE41788p pro...    32   0.70 
BT029036-1|ABJ16969.1|  244|Drosophila melanogaster IP03328p pro...    29   3.8  
BT025898-1|ABG02142.1|  413|Drosophila melanogaster IP03330p pro...    29   3.8  
BT025151-1|ABE73321.1|  518|Drosophila melanogaster IP03437p pro...    29   3.8  

>BT001646-1|AAN71401.1|  641|Drosophila melanogaster RE41788p
           protein.
          Length = 641

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 428 CDCVYMYTFCVCIRNLI*ISLQVPLFTLHYLWL 526
           C CV M+ F V +   + I  Q+   TLHY W+
Sbjct: 284 CSCVLMFGFFVAVFLYLLIHEQITFDTLHYYWM 316


>BT029036-1|ABJ16969.1|  244|Drosophila melanogaster IP03328p
           protein.
          Length = 244

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -3

Query: 257 RTSCESLSSVM*DIFVIRPGNLLLDCYS--HSNVFSIWQ*FHYKKCISIIVPNSEIKQKG 84
           R  C +  + M ++   R  N+L +     HS+V SI     +K  + I   N+ + Q  
Sbjct: 36  RIECSATGNPMPNVTWSRKNNILPNGEEKLHSHVLSIENVDRHKGGVYICTANNRVGQPA 95

Query: 83  KTQKHSHIIIYKQIRIKCDVLF 18
            +Q   H++   +I ++  V+F
Sbjct: 96  SSQVVLHVLFSPEISVERPVVF 117


>BT025898-1|ABG02142.1|  413|Drosophila melanogaster IP03330p
           protein.
          Length = 413

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -3

Query: 257 RTSCESLSSVM*DIFVIRPGNLLLDCYS--HSNVFSIWQ*FHYKKCISIIVPNSEIKQKG 84
           R  C +  + M ++   R  N+L +     HS+V SI     +K  + I   N+ + Q  
Sbjct: 36  RIECSATGNPMPNVTWSRKNNILPNGEEKLHSHVLSIENVDRHKGGVYICTANNRVGQPA 95

Query: 83  KTQKHSHIIIYKQIRIKCDVLF 18
            +Q   H++   +I ++  V+F
Sbjct: 96  SSQVVLHVLFSPEISVERPVVF 117


>BT025151-1|ABE73321.1|  518|Drosophila melanogaster IP03437p
           protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -3

Query: 257 RTSCESLSSVM*DIFVIRPGNLLLDCYS--HSNVFSIWQ*FHYKKCISIIVPNSEIKQKG 84
           R  C +  + M ++   R  N+L +     HS+V SI     +K  + I   N+ + Q  
Sbjct: 154 RIECSATGNPMPNVTWSRKNNILPNGEEKLHSHVLSIENVDRHKGGVYICTANNRVGQPA 213

Query: 83  KTQKHSHIIIYKQIRIKCDVLF 18
            +Q   H++   +I ++  V+F
Sbjct: 214 SSQVVLHVLFSPEISVERPVVF 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,985,647
Number of Sequences: 53049
Number of extensions: 491235
Number of successful extensions: 894
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)