Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1669
         (549 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7E7P8 Cluster: Putative uncharacterized protein; n=2; ...    35   1.1  
UniRef50_Q9W512 Cluster: CG17777-PA; n=1; Drosophila melanogaste...    34   1.9  
UniRef50_Q54MZ1 Cluster: Putative uncharacterized protein; n=1; ...    34   1.9  
UniRef50_Q6YH51 Cluster: Neurofilament triplet H1-like protein; ...    34   2.5  
UniRef50_Q54WQ8 Cluster: Putative uncharacterized protein; n=2; ...    34   2.5  
UniRef50_Q7S612 Cluster: Putative uncharacterized protein NCU056...    34   2.5  
UniRef50_UPI00006A0F6B Cluster: UPI00006A0F6B related cluster; n...    33   4.4  
UniRef50_A0NGE8 Cluster: ENSANGP00000011769; n=6; Culicidae|Rep:...    33   4.4  
UniRef50_Q0UWD3 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_Q6D8Y7 Cluster: Putative uncharacterized protein; n=2; ...    33   5.8  
UniRef50_P59797 Cluster: Selenoprotein V; n=6; Eutheria|Rep: Sel...    33   5.8  
UniRef50_Q4RSU4 Cluster: DNA polymerase; n=1; Tetraodon nigrovir...    32   7.6  
UniRef50_A6TNG2 Cluster: Abortive infection protein; n=1; Alkali...    32   7.6  

>UniRef50_A7E7P8 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Sclerotinia sclerotiorum 1980
          Length = 1085

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 395 NTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTP 538
           N SP  S    P R K P  + +P  R+ P+P  NTS+T +   S  P
Sbjct: 639 NASPSSSTTARPPRSKTPVATSSPQARRAPVPRPNTSHTSHPTQSSQP 686


>UniRef50_Q9W512 Cluster: CG17777-PA; n=1; Drosophila
           melanogaster|Rep: CG17777-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 96

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +1

Query: 58  PKAVEEKKQDKRGIYDIG-SYGGH 126
           P AV+EKK +KRGIY  G  YGG+
Sbjct: 19  PSAVDEKKTEKRGIYGFGHGYGGY 42


>UniRef50_Q54MZ1 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 519

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 20/50 (40%), Positives = 22/50 (44%)
 Frame = +2

Query: 389 SRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTP 538
           S +  P P   + P   K P  SPTP     P PS   S T  T  SPTP
Sbjct: 195 SSSEEPTPKPTETPSPTKSPTPSPTPSPTPSPTPSPTPSPTPTTTPSPTP 244


>UniRef50_Q6YH51 Cluster: Neurofilament triplet H1-like protein;
           n=3; Ranavirus|Rep: Neurofilament triplet H1-like
           protein - Ambystoma tigrinum stebbensi virus
          Length = 275

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +2

Query: 410 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKR 547
           P RRK PM  + P    +PLKRK PL  R+    +      +P KR
Sbjct: 220 PLRRKSPMNKRSPVKRKSPLKRKSPLKKRSPVKHKSPVKRRSPAKR 265



 Score = 33.1 bits (72), Expect = 4.4
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 410 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKR 547
           P +RK P+R K P    +P+KRK PL  ++    +      +P+KR
Sbjct: 214 PVKRKSPLRRKSPMNKRSPVKRKSPLKRKSPLKKRSPVKHKSPVKR 259


>UniRef50_Q54WQ8 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Dictyostelium discoideum AX4
          Length = 672

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 21/50 (42%), Positives = 24/50 (48%)
 Frame = +2

Query: 389 SRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTP 538
           S   SP PS  + P +   P  SPTP   + P PS   S TQ    SPTP
Sbjct: 244 SPTPSPTPSPTQSPTQ--SPTQSPTPSPTQSPTPSPTQSPTQSPTQSPTP 291



 Score = 33.1 bits (72), Expect = 4.4
 Identities = 21/50 (42%), Positives = 23/50 (46%)
 Frame = +2

Query: 389 SRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTP 538
           S   SP PS  + P   + P  SPTP     P PS   S TQ    SPTP
Sbjct: 176 SPTQSPTPSPTQSPT--QSPTQSPTPSPTPSPTPSPTQSPTQSPTQSPTP 223



 Score = 32.7 bits (71), Expect = 5.8
 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +2

Query: 386 QSRNTSPIPSRRKYPMR*KCPYL--SPTPLKRKFPLPSRNTSNTQYTYLSPTP 538
           QS   SP PS  + P +   P    SPTP     P PS   S TQ    SPTP
Sbjct: 215 QSPTQSPTPSPTQSPTQSPTPSPTPSPTPSPTPSPTPSPTQSPTQSPTQSPTP 267


>UniRef50_Q7S612 Cluster: Putative uncharacterized protein
           NCU05648.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU05648.1 - Neurospora crassa
          Length = 780

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -3

Query: 238 SCSFRLRNRVLLGDRS*YLRALHSFRDRRSLHRYLRNYVLHKILCHRCPFCLV 80
           SC FR+RN V    R   + A+ SF     L  ++ +Y   + + H+C  C V
Sbjct: 228 SCPFRVRNPVRFNIRDHEVCAMTSFESLADLRHHVMSYHRRRAMPHQCQRCKV 280


>UniRef50_UPI00006A0F6B Cluster: UPI00006A0F6B related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A0F6B UniRef100 entry -
           Xenopus tropicalis
          Length = 402

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 401 SPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPL 541
           +P+PS   +P     P+  PTPL    PLPS         + SPTPL
Sbjct: 4   TPLPSPTPFPC--PTPFPCPTPLPSPTPLPSPTPFPCPTPFPSPTPL 48


>UniRef50_A0NGE8 Cluster: ENSANGP00000011769; n=6; Culicidae|Rep:
           ENSANGP00000011769 - Anopheles gambiae str. PEST
          Length = 193

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 7/51 (13%)
 Frame = +1

Query: 1   VILVASLAVVAFA---KEEKGTPKAVE---EKKQDKRGIYDIG-SYGGHNF 132
           V+ V ++A+VA A   K++   P   E   EKKQ+KRG++D+G  Y  H +
Sbjct: 5   VVFVMAIALVASAEIKKKDAEAPAEAEANGEKKQEKRGLWDLGYGYESHGW 55


>UniRef50_Q0UWD3 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 851

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 383 IQSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPL 541
           ++ +  SP  ++   P R + P  S TP+K K   PS  T +++ T + P P+
Sbjct: 219 VRHKTASPARTKTASPSRTRTPGRSSTPVKMKTRAPSEFTIDSEATSVPPEPV 271


>UniRef50_Q6D8Y7 Cluster: Putative uncharacterized protein; n=2;
           Gammaproteobacteria|Rep: Putative uncharacterized
           protein - Erwinia carotovora subsp. atroseptica
           (Pectobacterium atrosepticum)
          Length = 814

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -3

Query: 481 ELSFQRCRAEVRALSPHRVLSSRRYRGRVSRLYTEQAPS 365
           EL FQRC  E  ALS + +LS    + R + L++E   S
Sbjct: 235 ELFFQRCYCESGALSKYALLSKEMLKARYAALFSESETS 273


>UniRef50_P59797 Cluster: Selenoprotein V; n=6; Eutheria|Rep:
           Selenoprotein V - Homo sapiens (Human)
          Length = 346

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +2

Query: 386 QSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTP 538
           Q+R  +P  +R    +R   P  +PTPL+   P+ +R    T    L+P+P
Sbjct: 4   QARTPAPSSARTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSP 54


>UniRef50_Q4RSU4 Cluster: DNA polymerase; n=1; Tetraodon
            nigroviridis|Rep: DNA polymerase - Tetraodon nigroviridis
            (Green puffer)
          Length = 1768

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 166  FRDRRSLHRYLRNYVLHKILCHRCPFC 86
            F D    H    +Y+L +++CH C FC
Sbjct: 1675 FSDEAQFHDPCNSYILPEVICHHCNFC 1701


>UniRef50_A6TNG2 Cluster: Abortive infection protein; n=1;
           Alkaliphilus metalliredigens QYMF|Rep: Abortive
           infection protein - Alkaliphilus metalliredigens QYMF
          Length = 635

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 543 FNGVGLRYVYWVFDVFLDGKGNFLFNGVGLRYG---HFHLIGYFLLDGIGDV 397
           FNGVG  ++Y VF   L      ++ G+GLR      F L+GY   + IG +
Sbjct: 193 FNGVGALFIYGVFLGLLRNMTGNVWAGIGLRLAISTAFSLLGYMGYEMIGSM 244


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.137    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,950,664
Number of Sequences: 1657284
Number of extensions: 7307276
Number of successful extensions: 19375
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19031
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)