Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1663
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075331-1|AAL68198.1|  330|Drosophila melanogaster GH11935p pro...   153   3e-37
AE014134-1455|AAF52636.2|  330|Drosophila melanogaster CG7830-PA...   153   3e-37

>AY075331-1|AAL68198.1|  330|Drosophila melanogaster GH11935p
           protein.
          Length = 330

 Score =  153 bits (370), Expect = 3e-37
 Identities = 79/149 (53%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
 Frame = -3

Query: 629 LFIILAGFLYIRRNNLEFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRTKTGPV- 453
           L  ++  FLYIRRNNLEFLYNK LW   AVFFCFAM+SGQMWN IRGPP  H+++ G V 
Sbjct: 192 LVALVGSFLYIRRNNLEFLYNKNLWGAIAVFFCFAMISGQMWNHIRGPPLVHKSQNGGVA 251

Query: 452 YINGGSHGQFVLESYIVAILNGPVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVG 273
           YI+G S GQ V+E+YIV  LN  +V+GMIL+IE +G  K H+  R +A         + G
Sbjct: 252 YIHGSSQGQLVVETYIVMFLNAMIVLGMILLIE-SGTPKAHNKNRIMA---------MTG 301

Query: 272 XXXXXXXXXXXXXXFRAKTQGYPYSFLFK 186
                         FR+K QGYPYSFLFK
Sbjct: 302 LVLLTVFFSFLLSVFRSKAQGYPYSFLFK 330


>AE014134-1455|AAF52636.2|  330|Drosophila melanogaster CG7830-PA
           protein.
          Length = 330

 Score =  153 bits (370), Expect = 3e-37
 Identities = 79/149 (53%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
 Frame = -3

Query: 629 LFIILAGFLYIRRNNLEFLYNKQLWAVCAVFFCFAMVSGQMWNQIRGPPFFHRTKTGPV- 453
           L  ++  FLYIRRNNLEFLYNK LW   AVFFCFAM+SGQMWN IRGPP  H+++ G V 
Sbjct: 192 LVALVGSFLYIRRNNLEFLYNKNLWGAIAVFFCFAMISGQMWNHIRGPPLVHKSQNGGVA 251

Query: 452 YINGGSHGQFVLESYIVAILNGPVVVGMILMIEAAGGVKNHDPTRTLAEGKRRRFQSVVG 273
           YI+G S GQ V+E+YIV  LN  +V+GMIL+IE +G  K H+  R +A         + G
Sbjct: 252 YIHGSSQGQLVVETYIVMFLNAMIVLGMILLIE-SGTPKAHNKNRIMA---------MTG 301

Query: 272 XXXXXXXXXXXXXXFRAKTQGYPYSFLFK 186
                         FR+K QGYPYSFLFK
Sbjct: 302 LVLLTVFFSFLLSVFRSKAQGYPYSFLFK 330


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,218,678
Number of Sequences: 53049
Number of extensions: 672587
Number of successful extensions: 1485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)