SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1662
         (563 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX649571-2|CAI18773.1|  951|Homo sapiens ADAMTS-like 2 protein.        30   6.5  
BX649571-1|CAM26559.1| 1060|Homo sapiens ADAMTS-like 2 protein.        30   6.5  
BX629352-2|CAI23592.1|  951|Homo sapiens ADAMTS-like 2 protein.        30   6.5  
BX629352-1|CAM28356.1| 1060|Homo sapiens ADAMTS-like 2 protein.        30   6.5  
BX324209-2|CAI17317.1|  951|Homo sapiens ADAMTS-like 2 protein.        30   6.5  
BX324209-1|CAM24586.1| 1060|Homo sapiens ADAMTS-like 2 protein.        30   6.5  
BC050544-1|AAH50544.1|  951|Homo sapiens ADAMTS-like 2 protein.        30   6.5  
AB011177-1|BAA25531.2| 1031|Homo sapiens KIAA0605 protein protein.     30   6.5  

>BX649571-2|CAI18773.1|  951|Homo sapiens ADAMTS-like 2 protein.
          Length = 951

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 274 RTSTGTLLRYITRDVTENEPSGTTTK*ASLCRLNYNGCIYTARTKHWE 417
           RT TGT  RY    V E  P G + +    C +++N  +Y  RT  W+
Sbjct: 88  RTCTGTSKRYQLCRVQECPPDGRSFR-EEQC-VSFNSHVYNGRTHQWK 133


>BX649571-1|CAM26559.1| 1060|Homo sapiens ADAMTS-like 2 protein.
          Length = 1060

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 274 RTSTGTLLRYITRDVTENEPSGTTTK*ASLCRLNYNGCIYTARTKHWE 417
           RT TGT  RY    V E  P G + +    C +++N  +Y  RT  W+
Sbjct: 197 RTCTGTSKRYQLCRVQECPPDGRSFR-EEQC-VSFNSHVYNGRTHQWK 242


>BX629352-2|CAI23592.1|  951|Homo sapiens ADAMTS-like 2 protein.
          Length = 951

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 274 RTSTGTLLRYITRDVTENEPSGTTTK*ASLCRLNYNGCIYTARTKHWE 417
           RT TGT  RY    V E  P G + +    C +++N  +Y  RT  W+
Sbjct: 88  RTCTGTSKRYQLCRVQECPPDGRSFR-EEQC-VSFNSHVYNGRTHQWK 133


>BX629352-1|CAM28356.1| 1060|Homo sapiens ADAMTS-like 2 protein.
          Length = 1060

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 274 RTSTGTLLRYITRDVTENEPSGTTTK*ASLCRLNYNGCIYTARTKHWE 417
           RT TGT  RY    V E  P G + +    C +++N  +Y  RT  W+
Sbjct: 197 RTCTGTSKRYQLCRVQECPPDGRSFR-EEQC-VSFNSHVYNGRTHQWK 242


>BX324209-2|CAI17317.1|  951|Homo sapiens ADAMTS-like 2 protein.
          Length = 951

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 274 RTSTGTLLRYITRDVTENEPSGTTTK*ASLCRLNYNGCIYTARTKHWE 417
           RT TGT  RY    V E  P G + +    C +++N  +Y  RT  W+
Sbjct: 88  RTCTGTSKRYQLCRVQECPPDGRSFR-EEQC-VSFNSHVYNGRTHQWK 133


>BX324209-1|CAM24586.1| 1060|Homo sapiens ADAMTS-like 2 protein.
          Length = 1060

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 274 RTSTGTLLRYITRDVTENEPSGTTTK*ASLCRLNYNGCIYTARTKHWE 417
           RT TGT  RY    V E  P G + +    C +++N  +Y  RT  W+
Sbjct: 197 RTCTGTSKRYQLCRVQECPPDGRSFR-EEQC-VSFNSHVYNGRTHQWK 242


>BC050544-1|AAH50544.1|  951|Homo sapiens ADAMTS-like 2 protein.
          Length = 951

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 274 RTSTGTLLRYITRDVTENEPSGTTTK*ASLCRLNYNGCIYTARTKHWE 417
           RT TGT  RY    V E  P G + +    C +++N  +Y  RT  W+
Sbjct: 88  RTCTGTSKRYQLCRVQECPPDGRSFR-EEQC-VSFNSHVYNGRTHQWK 133


>AB011177-1|BAA25531.2| 1031|Homo sapiens KIAA0605 protein protein.
          Length = 1031

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 274 RTSTGTLLRYITRDVTENEPSGTTTK*ASLCRLNYNGCIYTARTKHWE 417
           RT TGT  RY    V E  P G + +    C +++N  +Y  RT  W+
Sbjct: 168 RTCTGTSKRYQLCRVQECPPDGRSFR-EEQC-VSFNSHVYNGRTHQWK 213


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,779,478
Number of Sequences: 237096
Number of extensions: 1515793
Number of successful extensions: 3029
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3029
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -