Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1661
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.0  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   4.2  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   4.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 485 CKGYWV*WIRKNVSRASTVTGSCVI 411
           CKG++   +RK++S A     SC+I
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSCII 154


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 485 CKGYWV*WIRKNVSRASTVTGSCVI 411
           CKG++   +RK++S A     SC+I
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSCII 154


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 129 ARRLIQFVYKTYINVLILLEAAYEGT 206
           A +++QF+      + +LLEA Y+ T
Sbjct: 86  ADKVVQFLIDNKPEIWVLLEAKYDPT 111


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 129 ARRLIQFVYKTYINVLILLEAAYEGT 206
           A +++QF+      + +LLEA Y+ T
Sbjct: 86  ADKVVQFLIDNKPEIWVLLEAKYDPT 111


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = -1

Query: 192 LLPIKLKHLCTFCKQTVLNGALFHKYSITINIDLKNISIRVKLINH 55
           ++ I L  LC    Q +  G ++   + ++ +D    S++  LI H
Sbjct: 175 IIVIWLLALCLAVPQAIQFGVVYENKNGSVILDTARCSMKWTLIEH 220


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 65  NFTRIEMFFKSIFI 106
           NFT   M+FK +FI
Sbjct: 662 NFTIPNMYFKDVFI 675


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 65  NFTRIEMFFKSIFI 106
           NFT   M+FK +FI
Sbjct: 662 NFTIPNMYFKDVFI 675


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/53 (22%), Positives = 24/53 (45%)
 Frame = -1

Query: 357  NLFNKYNSIYNSRINTILSINTVS*TSFTYNIFRFCKTEKYVDVKLADRLAFL 199
            N+ + Y S+++    T L         +T+N+ +  KT   V  ++    AF+
Sbjct: 917  NMLDTYESVHSFPTETGLPF------VYTFNVIKLTKTSGTVQAQINPDFAFI 963


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,067
Number of Sequences: 438
Number of extensions: 3473
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)