Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1660
(632 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 44 0.004
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 41 0.022
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 41 0.022
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 41 0.022
UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahym... 39 0.087
UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropelli... 39 0.11
UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos t... 37 0.46
UniRef50_A7TS98 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q00174 Cluster: Laminin subunit alpha precursor; n=7; D... 35 1.9
UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein PF07_0... 34 2.5
UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, who... 34 2.5
UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n... 34 3.3
UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma g... 34 3.3
UniRef50_Q3ZEH4 Cluster: Hypothetical orf3; n=1; Epidermophyton ... 34 3.3
UniRef50_UPI0000EBD38C Cluster: PREDICTED: hypothetical protein;... 33 5.7
UniRef50_A5K3I2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_Q5ADW4 Cluster: Likely initiator-specific tRNA phosphor... 33 7.5
UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse tr... 32 10.0
UniRef50_UPI00006A0A65 Cluster: platelet endothelial aggregation... 32 10.0
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 32 10.0
UniRef50_Q09726 Cluster: Uncharacterized protein C31A2.06; n=1; ... 32 10.0
>UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=6; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 415
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -3
Query: 393 VTGKVEGKRPRGRNPTRWTDQIRAALDTTVHDALHSAADRNRWRCTIK 250
+ +VEGKR RGR +W D I+ T +A A DRN WR T +
Sbjct: 351 IESQVEGKRKRGRQRKQWFDNIKEWTGLTYTEAKRLAQDRNNWRKTTR 398
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 41.1 bits (92), Expect = 0.022
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 375 GKRPRGRNPTRWTDQIRAALDTTVHDALHSAADRNRW 265
G+RPRGR P RW DQ++ + + +A A DR+ W
Sbjct: 472 GRRPRGRPPKRWKDQVQYDVGLSTQEAEQRAQDRSDW 508
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 41.1 bits (92), Expect = 0.022
Identities = 23/47 (48%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = -3
Query: 393 VTGKVEGKRPRGRNPTRWTDQI----RAALDTTVHDALHSAADRNRW 265
V GKV G RPRGR P RW D I +A + DA AADR W
Sbjct: 966 VEGKVTGNRPRGRPPKRWLDCISEDCKARSIPRLTDASRLAADRKTW 1012
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 41.1 bits (92), Expect = 0.022
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 393 VTGKVEGKRPRGRNPTRWTDQIRAALDTTVHDALHSAA----DRNRWRCTIK 250
+ G + GKRPRGR RWTD I+A D+L A DR W+ +K
Sbjct: 879 LNGNIHGKRPRGRPAKRWTDCIKADCKNRQVDSLTKATRLTEDRKVWQAIVK 930
>UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahymena
thermophila SB210|Rep: KOW motif family protein -
Tetrahymena thermophila SB210
Length = 778
Score = 39.1 bits (87), Expect = 0.087
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -2
Query: 625 QYSTIINWNCKFVHYYDCILYFYNHKFRQDYTIKNIN 515
QYS + C+ +H Y +++ +N KFR YT++NIN
Sbjct: 621 QYS---GYQCQVIHVYKSLVFLFNPKFRDTYTVENIN 654
>UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropellin
Ia; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to fibropellin Ia - Strongylocentrotus
purpuratus
Length = 1096
Score = 38.7 bits (86), Expect = 0.11
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -3
Query: 381 VEGKRPRGRNPTRWTDQIRAALDTTVHDALHSAA----DRNRWRCTIK 250
V GK PRGR RWTD I+A + D+L A DR WR +K
Sbjct: 22 VHGKHPRGRPAKRWTDCIKADCNNRQVDSLTKATRLTEDRKVWRTIVK 69
>UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos
taurus|Rep: Reverse transcriptase-like - Bos taurus
(Bovine)
Length = 335
Score = 36.7 bits (81), Expect = 0.46
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -3
Query: 387 GKVEGKRPRGRNPTRWTDQIRAALDTTVHDALHSAADRNRWRCTI 253
GK+EG+R RGR RW D I ++D + DR W C +
Sbjct: 279 GKIEGRRRRGRQRMRWLDGIINSMDMGLGGLRELVMDRETW-CAV 322
>UniRef50_A7TS98 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1368
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -2
Query: 475 RRQEQKFDNK*YVCVCASNKWYVVCVKSHWKGRGQATKRQEPDPLDGPDSCSP 317
RR++Q+ D+K C A K V CV+ G TK E PLDG D+ SP
Sbjct: 45 RRRKQRCDHKMPSCT-ACLKAAVRCVQPERYALGSNTKSPESTPLDGNDTSSP 96
>UniRef50_Q00174 Cluster: Laminin subunit alpha precursor; n=7;
Diptera|Rep: Laminin subunit alpha precursor - Drosophila
melanogaster (Fruit fly)
Length = 3712
Score = 34.7 bits (76), Expect = 1.9
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +3
Query: 192 PCVGFLIT-EGRGHGLETDCFL*CTAICSYLQLSAE--HRALWYPGLHESGPSNGSGSCL 362
P G+ I E GH DC T ICS Q E H G + + + G C+
Sbjct: 1801 PYGGYCIPCECNGHSETCDC---ATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCM 1857
Query: 363 LVACPRPF 386
+ ACP PF
Sbjct: 1858 ICACPLPF 1865
>UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein
PF07_0118; n=3; Plasmodium|Rep: Putative uncharacterized
protein PF07_0118 - Plasmodium falciparum (isolate 3D7)
Length = 5561
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 601 NCKFVHYYDCILYFYNHKFRQDYTIKNINKDKQYLIYSQFDNRRQEQ 461
N +FV Y I FY++ F I N +KD QY YS ++N + Q
Sbjct: 401 NIQFVLPYKPIRMFYSNNFLFFVNIINKSKDLQYFTYSIYNNNHKNQ 447
>UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1806
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -2
Query: 610 INWNCKFVHYYDCILYFYNHKFRQDYTIKNINKDKQYLIYSQFDNRRQEQKFDNK 446
I+ CK YD +Y+YN K ++ Y +NK +LIY Q+++ + NK
Sbjct: 219 ISLECKNNIEYDNNIYYYNKKIQKFYGY--VNKQNDHLIYKQWNSYKNISTDQNK 271
>UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 853
Score = 34.3 bits (75), Expect = 2.5
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -2
Query: 571 ILYFYNHKFRQDYTIKNINKDKQYLIYS 488
+ YF+N++F Q T +N+N + QY+IYS
Sbjct: 312 LTYFHNNQFIQGITEQNLNSNLQYIIYS 339
>UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n=3;
Bos taurus|Rep: UPI0000F33B2A UniRef100 entry - Bos
Taurus
Length = 253
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 387 GKVEGKRPRGRNPTRWTDQIRAALDTTVHDALHSAADRNRW 265
GK+EGKR RG+ +W D I ++D ++ + D W
Sbjct: 199 GKIEGKRRRGQKRMKWLDGITNSMDMSLICTSENPRDGGAW 239
>UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S3 - Toxoplasma gondii
Length = 224
Score = 33.9 bits (74), Expect = 3.3
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 610 INWNCKFVHYYDCILYFYNHKFRQDYTIKNINKDKQYLIYSQFDN-RRQEQKF 455
+N KF +CI YFYN+ + IK IN K+ IY + DN +QK+
Sbjct: 63 LNNKYKFQLNINCIFYFYNYFLKLKIFIKEINNIKR--IYKKIDNLNNLKQKY 113
>UniRef50_Q3ZEH4 Cluster: Hypothetical orf3; n=1; Epidermophyton
floccosum|Rep: Hypothetical orf3 - Epidermophyton
floccosum
Length = 188
Score = 33.9 bits (74), Expect = 3.3
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +2
Query: 371 LPSTFPVTFYTHYIPFI*RTHA----YILFVVKLLFLTSVVKLRID*ILFVFVNIFY 529
+ + F FY +++ I H+ +ILF+ +LF+TS++ I L++F NI Y
Sbjct: 123 IKNIFGNNFYNYFLKIINNLHSINTIWILFITLILFITSIINFSI--TLYIFNNINY 177
>UniRef50_UPI0000EBD38C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 181
Score = 33.1 bits (72), Expect = 5.7
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -2
Query: 346 PLDGPDSCSPGYHSARCSALSCR*EQMAVHYKKQSVSRP*PRPSVMRKPTQ 194
P GP + PG A C AL R Q S S P P P+ R P +
Sbjct: 129 PFSGPSAPLPGEEPAACPALRLRPGQPGARSPLPSPSHPPPNPAPPRSPPE 179
>UniRef50_A5K3I2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 3120
Score = 33.1 bits (72), Expect = 5.7
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -1
Query: 203 TDARRRSVCNVFFIDVMYLLCIILKKY-*HCALLLSILYKCGKFH 72
TD + CNV++ +YLLC++ +++ H +LL +L K KFH
Sbjct: 2221 TDYAYKINCNVYYAG-LYLLCVLKRRHVFHLMVLLKMLRKFCKFH 2264
>UniRef50_Q5ADW4 Cluster: Likely initiator-specific tRNA
phosphoribosyl transferase; n=1; Candida albicans|Rep:
Likely initiator-specific tRNA phosphoribosyl
transferase - Candida albicans (Yeast)
Length = 437
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 547 FRQDYTIKNINKDKQYLIYSQFDNRRQEQKF 455
F ++YTI +I KD+Q L YS N++ KF
Sbjct: 325 FHEEYTITDIPKDRQILQYSISSNKKGSNKF 355
>UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Danio rerio|Rep: PREDICTED:
similar to reverse transcriptase-like - Danio rerio
Length = 249
Score = 32.3 bits (70), Expect = 10.0
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = -3
Query: 444 SMYACVRQINGM*CV*KVTGKVEGKRPRGRNPTRWTDQIRAALDTTVHDALHSAADRNR 268
S + + Q N M + G V G R RGR TRW D I+ DT ++ A RNR
Sbjct: 192 SFFGHIMQTNSMETAFTL-GAVSGSRRRGRQRTRWLDTIKT--DTNLNMEELKEAVRNR 247
>UniRef50_UPI00006A0A65 Cluster: platelet endothelial aggregation
receptor 1; n=2; Xenopus tropicalis|Rep: platelet
endothelial aggregation receptor 1 - Xenopus tropicalis
Length = 995
Score = 32.3 bits (70), Expect = 10.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 355 EPDPLDGPDSCSPGYHSARCSALSCR 278
E D + G SC PGYH A C + C+
Sbjct: 684 ECDHMTGKCSCLPGYHGAFCEIIDCK 709
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 32.3 bits (70), Expect = 10.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 375 GKRPRGRNPTRWTDQIRAALDTTVHDALHSAADRNRWR 262
G+R GR PTRWTD + +T + +A DR+ W+
Sbjct: 449 GRRSVGRPPTRWTDDLVKVAGST---WMQAAQDRSLWK 483
>UniRef50_Q09726 Cluster: Uncharacterized protein C31A2.06; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C31A2.06 - Schizosaccharomyces pombe (Fission yeast)
Length = 542
Score = 32.3 bits (70), Expect = 10.0
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = -2
Query: 607 NWNCKFVHYYDCILYFYNHKFRQDYTIKNINKDKQYLIYSQFDNRRQEQ 461
NW C + + ++ FR+ Y + NI K +YS ++ +Q +
Sbjct: 188 NWTCLSIENFGISIHVITKNFREYYKLDNIEHVKDETLYSDLEHGKQSR 236
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,012,331
Number of Sequences: 1657284
Number of extensions: 13390205
Number of successful extensions: 33973
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 32444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33964
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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