Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1660
         (632 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai...    35   0.11 
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai...    35   0.11 
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot...    35   0.11 
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P...    35   0.11 
AY118573-1|AAM49942.1|  898|Drosophila melanogaster LD43055p pro...    29   5.2  
AY060910-1|AAL28458.1|  285|Drosophila melanogaster GM05651p pro...    29   5.2  
AE014297-1147|AAF54528.1|  892|Drosophila melanogaster CG6325-PA...    29   5.2  

>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
            protein.
          Length = 3712

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +3

Query: 192  PCVGFLIT-EGRGHGLETDCFL*CTAICSYLQLSAE--HRALWYPGLHESGPSNGSGSCL 362
            P  G+ I  E  GH    DC    T ICS  Q   E  H      G + +  +   G C+
Sbjct: 1801 PYGGYCIPCECNGHSETCDC---ATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCM 1857

Query: 363  LVACPRPF 386
            + ACP PF
Sbjct: 1858 ICACPLPF 1865


>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
           protein.
          Length = 1951

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +3

Query: 192 PCVGFLIT-EGRGHGLETDCFL*CTAICSYLQLSAE--HRALWYPGLHESGPSNGSGSCL 362
           P  G+ I  E  GH    DC    T ICS  Q   E  H      G + +  +   G C+
Sbjct: 40  PYGGYCIPCECNGHSETCDC---ATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCM 96

Query: 363 LVACPRPF 386
           + ACP PF
Sbjct: 97  ICACPLPF 104


>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
          Length = 3712

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +3

Query: 192  PCVGFLIT-EGRGHGLETDCFL*CTAICSYLQLSAE--HRALWYPGLHESGPSNGSGSCL 362
            P  G+ I  E  GH    DC    T ICS  Q   E  H      G + +  +   G C+
Sbjct: 1801 PYGGYCIPCECNGHSETCDC---ATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCM 1857

Query: 363  LVACPRPF 386
            + ACP PF
Sbjct: 1858 ICACPLPF 1865


>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
            protein.
          Length = 3712

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +3

Query: 192  PCVGFLIT-EGRGHGLETDCFL*CTAICSYLQLSAE--HRALWYPGLHESGPSNGSGSCL 362
            P  G+ I  E  GH    DC    T ICS  Q   E  H      G + +  +   G C+
Sbjct: 1801 PYGGYCIPCECNGHSETCDC---ATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCM 1857

Query: 363  LVACPRPF 386
            + ACP PF
Sbjct: 1858 ICACPLPF 1865


>AY118573-1|AAM49942.1|  898|Drosophila melanogaster LD43055p
           protein.
          Length = 898

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = +3

Query: 315 PGLHESGPSNGSGSC---LLVACPRPFQ*LFTHT---TYHLFDAHTHTYYLLSNFC 464
           PG H S P    GSC   + +     +  L   +   T H FD  T TYY++S  C
Sbjct: 674 PGYHTSLPMEVHGSCYSEMQMISQASYHRLRCSSVVITQHSFDLETFTYYVISLLC 729


>AY060910-1|AAL28458.1|  285|Drosophila melanogaster GM05651p
           protein.
          Length = 285

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = +3

Query: 315 PGLHESGPSNGSGSC---LLVACPRPFQ*LFTHT---TYHLFDAHTHTYYLLSNFC 464
           PG H S P    GSC   + +     +  L   +   T H FD  T TYY++S  C
Sbjct: 67  PGYHTSLPMEVHGSCYSEMQMISQASYHRLRCSSVVITQHSFDLETFTYYVISLLC 122


>AE014297-1147|AAF54528.1|  892|Drosophila melanogaster CG6325-PA
           protein.
          Length = 892

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = +3

Query: 315 PGLHESGPSNGSGSC---LLVACPRPFQ*LFTHT---TYHLFDAHTHTYYLLSNFC 464
           PG H S P    GSC   + +     +  L   +   T H FD  T TYY++S  C
Sbjct: 674 PGYHTSLPMEVHGSCYSEMQMISQASYHRLRCSSVVITQHSFDLETFTYYVISLLC 729


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,054,970
Number of Sequences: 53049
Number of extensions: 644674
Number of successful extensions: 1653
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1653
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)