Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1659
         (307 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2L358 Cluster: Putative FKBP-Like protein; n=1; Malus ...    32   2.9  
UniRef50_Q97ZT2 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  

>UniRef50_Q2L358 Cluster: Putative FKBP-Like protein; n=1; Malus x
           domestica|Rep: Putative FKBP-Like protein - Malus
           domestica (Apple) (Malus sylvestris)
          Length = 217

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 58  FELFSRYSNIALLFEFPLHINMFGFFFKSK 147
           F+LF +Y ++AL  + P H+NM   F K K
Sbjct: 93  FQLFGKYRDMALAVKNPCHLNMAASFIKLK 122


>UniRef50_Q97ZT2 Cluster: Putative uncharacterized protein; n=1;
           Sulfolobus solfataricus|Rep: Putative uncharacterized
           protein - Sulfolobus solfataricus
          Length = 718

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 82  NIALLFEFPLHINMFGFFFKSKPLLIYF 165
           NI  +FEFPL+ +  GFFF S  L I +
Sbjct: 14  NIIGIFEFPLYESFIGFFFISSALSILY 41


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,262,892
Number of Sequences: 1657284
Number of extensions: 4160432
Number of successful extensions: 8594
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8573
length of database: 575,637,011
effective HSP length: 78
effective length of database: 446,368,859
effective search space used: 10266483757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)