Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1659
         (307 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   1.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   2.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   2.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   8.8  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 70  SRYSNIALLFEFPLHINMFGFFFKSKPLLIYFSI 171
           SR S  +    FP+   + GF F S    I  SI
Sbjct: 350 SRTSKFSAAGFFPVDFTLLGFIFGSVTSYIIISI 383


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +2

Query: 227 FNTCSEMMIFVIS 265
           FNT ++++IFV+S
Sbjct: 75  FNTFAKLLIFVVS 87


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 53  FLLNCFHDIRILHYYLNSRY 112
           FL NCFH   +L   + SRY
Sbjct: 144 FLYNCFHSTLLL--MILSRY 161


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 63  IVFTIFEYCTII 98
           I++ IF YC I+
Sbjct: 154 ILYLIFSYCPIV 165


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +3

Query: 57  F*IVFTIFEYCTII 98
           F   + +F+YCT++
Sbjct: 498 FVTTYLMFDYCTVL 511


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,931
Number of Sequences: 336
Number of extensions: 1160
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)