Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1659
         (307 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223...    29   0.55 
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221...    29   0.55 

>12_01_0295 +
           2235209-2235263,2236182-2236361,2236478-2236567,
           2236947-2237131,2237200-2237358,2237437-2237589,
           2237938-2238264
          Length = 382

 Score = 29.5 bits (63), Expect = 0.55
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 58  FELFSRYSNIALLFEFPLHINMFGFFFKSK 147
           F+LF +Y ++AL  + P H+NM     K K
Sbjct: 234 FQLFGKYRDMALAVKNPCHLNMAACLIKLK 263


>11_01_0294 +
           2212807-2212876,2213664-2213843,2214505-2214594,
           2215054-2215238,2215399-2215521,2215593-2215745,
           2216090-2216416
          Length = 375

 Score = 29.5 bits (63), Expect = 0.55
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 58  FELFSRYSNIALLFEFPLHINMFGFFFKSK 147
           F+LF +Y ++AL  + P H+NM     K K
Sbjct: 227 FQLFGKYRDMALAVKNPCHLNMAACLIKLK 256


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,049,625
Number of Sequences: 37544
Number of extensions: 92269
Number of successful extensions: 157
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)