Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1659
         (307 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70756-11|CAA94793.2|  368|Caenorhabditis elegans Hypothetical p...    29   0.85 
Z70211-3|CAA94156.1|  363|Caenorhabditis elegans Hypothetical pr...    27   2.0  
AF022971-12|AAG23974.3|  229|Caenorhabditis elegans Hypothetical...    27   2.0  
Z70287-2|CAA94298.2|  700|Caenorhabditis elegans Hypothetical pr...    26   4.5  
U49947-1|AAA93420.2|  232|Caenorhabditis elegans Hypothetical pr...    26   4.5  
AF022972-6|AAM29670.1|  370|Caenorhabditis elegans Hypothetical ...    26   4.5  
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    25   7.9  

>Z70756-11|CAA94793.2|  368|Caenorhabditis elegans Hypothetical
           protein T06E4.7 protein.
          Length = 368

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +1

Query: 34  SNLHQIISFELFSRYSNIALLFEFPLHINMFGFFFKSKPLLIYFSI 171
           S L+ I+SF LF  Y ++ L      + NMFG +F    LLI F +
Sbjct: 96  SYLYAILSFPLFFFYRSMILA-----NSNMFGQYFTKNTLLITFVV 136


>Z70211-3|CAA94156.1|  363|Caenorhabditis elegans Hypothetical
           protein K11E4.3 protein.
          Length = 363

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 128 PNIFICNGNSNNSAIFEYRENN 63
           PN+F+ N  +NN  +FE  E N
Sbjct: 133 PNVFVHNKRTNNIDVFETNEQN 154


>AF022971-12|AAG23974.3|  229|Caenorhabditis elegans Hypothetical
           protein C31B8.1 protein.
          Length = 229

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 91  LLFEFPLHINMFGFFFKSKPLLIYFSI 171
           LLFEF +HI +   FF   PLLI+  I
Sbjct: 133 LLFEFMVHIMISLPFFILSPLLIFLKI 159


>Z70287-2|CAA94298.2|  700|Caenorhabditis elegans Hypothetical
           protein R09E10.3 protein.
          Length = 700

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +1

Query: 28  RGSNL--HQIISFELFSRYSNIALLFEFPLHINMFGFFF 138
           RG NL   Q+IS  L  RYS +     +P+ +   GFFF
Sbjct: 4   RGLNLITRQVIS-RLTFRYSGLFTRITYPISVQDRGFFF 41


>U49947-1|AAA93420.2|  232|Caenorhabditis elegans Hypothetical
           protein C30G4.2 protein.
          Length = 232

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 55  SFELFSRYSNIALLFEFPLHINMFGFFFKS 144
           +++L      +A L+EFP  IN +  FF S
Sbjct: 187 NYQLKEDLFEVAKLYEFPFVINFYNQFFNS 216


>AF022972-6|AAM29670.1|  370|Caenorhabditis elegans Hypothetical
           protein F10D2.12 protein.
          Length = 370

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
 Frame = +1

Query: 16  EFGGRGSNLHQIISFELFSRYSNIALLFEFPLHINMFG--FFFKSKPL 153
           E GG   +L+Q+ S +L S++S+I  L E  + ++ FG  FF K  PL
Sbjct: 111 EIGGITVDLNQLKSQQLDSKWSDILNLREKTMLVS-FGSVFFSKDMPL 157


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
           protein ZK783.1 protein.
          Length = 2585

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -3

Query: 188 KIFHY*MLK*INKGLDLKKKPNIFICNGNSNNSAIFEYRENNS 60
           KI+ Y ++  + KGL++ K+  + +  GN  ++ +   R N+S
Sbjct: 592 KIYAYMIIIFLLKGLEITKEKGLHVIGGNEEDTVV-ATRSNHS 633


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,839,518
Number of Sequences: 27780
Number of extensions: 99208
Number of successful extensions: 196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)