Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1656
         (320 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1; ...   108   2e-23
UniRef50_Q5MGF8 Cluster: Putative uncharacterized protein; n=1; ...    51   4e-06
UniRef50_Q4QGS0 Cluster: Putative uncharacterized protein; n=4; ...    31   4.9  
UniRef50_UPI0000EB3857 Cluster: UPI0000EB3857 related cluster; n...    30   8.6  
UniRef50_Q2XNE8 Cluster: Cystatin WC-4; n=4; Triticum aestivum|R...    30   8.6  

>UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 272

 Score =  108 bits (260), Expect = 2e-23
 Identities = 57/79 (72%), Positives = 58/79 (73%)
 Frame = +3

Query: 84  MKVLLLCIAFAAVSLAMPVAEEKDVVAAQPILEVAPKIDDSXXXXXXXXXXXXXXXXXXX 263
           MKVLLLCIAFAAVSLAMPVAEEKDVV AQPILEVAPKIDDS                   
Sbjct: 1   MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAATEEKKAEPAP 60

Query: 264 XSNDEVPAIPQAKKDDIAP 320
            SNDEVPAIP+AKKDDIAP
Sbjct: 61  VSNDEVPAIPEAKKDDIAP 79


>UniRef50_Q5MGF8 Cluster: Putative uncharacterized protein; n=1;
           Lonomia obliqua|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 206

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +3

Query: 81  KMKVLLLCIAFAAVSLAMPVAEEKDVVAAQPI 176
           +MKVLLLC+AFAAVS+AMPVAEEK  VA  P+
Sbjct: 18  RMKVLLLCMAFAAVSMAMPVAEEKPEVAEVPV 49


>UniRef50_Q4QGS0 Cluster: Putative uncharacterized protein; n=4;
           Eukaryota|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1193

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 107 SLRGCEFGDASGGGKGRSCRSTNSRSRA 190
           S RG E G  SGGG+GR    T+S S++
Sbjct: 873 SHRGGEAGSGSGGGRGRGAGGTSSASKS 900


>UniRef50_UPI0000EB3857 Cluster: UPI0000EB3857 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB3857 UniRef100
           entry - Canis familiaris
          Length = 420

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -3

Query: 186 RLLELVERQLRPFPPPLASPNSQPRRLCTIVRP 88
           R+  LV R  RP  PP + P S P   CT  RP
Sbjct: 233 RVPSLVPRPRRPGHPPASVPASPPTPTCTCPRP 265


>UniRef50_Q2XNE8 Cluster: Cystatin WC-4; n=4; Triticum aestivum|Rep:
           Cystatin WC-4 - Triticum aestivum (Wheat)
          Length = 142

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 51  KRRRVTGSIFKMKVLLLCIAFAAVSLAMPVAEEKDVVAAQPILEVAPKIDDS 206
           K  RV GS+  + +LLL +   ++      A EK  +AA+P   +A  I DS
Sbjct: 3   KHHRVLGSVAAL-LLLLALVLPSIQTQKQSAREKAAMAAEPARRLAGGIVDS 53


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,449,495
Number of Sequences: 1657284
Number of extensions: 3949798
Number of successful extensions: 13562
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13546
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)