Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1656
         (320 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   1.2  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   3.7  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   3.7  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   3.7  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   3.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    22   6.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    21   8.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    21   8.6  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 189  ARLLELVERQLRPFPPPLASPNSQPRR 109
            AR     +RQ    PPP  SP ++ RR
Sbjct: 1065 ARRAATQQRQAERLPPPPPSPRTERRR 1091


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 125 FGDASGGGKGRSCRSTNSRSRAQ 193
           F  + GGG G S  + +S S AQ
Sbjct: 218 FSASGGGGSGGSAGNFSSESNAQ 240


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 125 FGDASGGGKGRSCRSTNSRSRAQ 193
           F  + GGG G S  + +S S AQ
Sbjct: 218 FSASGGGGSGGSAGNFSSESNAQ 240


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 125 FGDASGGGKGRSCRSTNSRSRAQ 193
           F  + GGG G S  + +S S AQ
Sbjct: 218 FSASGGGGSGGSAGNFSSESNAQ 240


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 125 FGDASGGGKGRSCRSTNSRSRAQ 193
           F  + GGG G S  + +S S AQ
Sbjct: 218 FSASGGGGSGGSAGNFSSESNAQ 240


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 128  GDASGGGKGRSCRSTNSRSRAQN 196
            G+  GGG+G   RS    + AQN
Sbjct: 1210 GNDRGGGEGGGSRSVPPSTFAQN 1232


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 113  RGCEFGDASGGGKGRSCRS 169
            +G   G   GGGKG + RS
Sbjct: 1492 KGAGGGGGGGGGKGAAGRS 1510


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +2

Query: 128 GDASGGGKGRS-CRSTNSRSR 187
           G   GGG GR   +  NSRSR
Sbjct: 530 GGGGGGGGGREGSQEWNSRSR 550


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,109
Number of Sequences: 2352
Number of extensions: 4288
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)