BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1656
(320 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 30 0.58
BT004500-1|AAO42664.1| 216|Drosophila melanogaster GH08123p pro... 30 0.58
BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p pro... 30 0.58
BT001750-1|AAN71505.1| 216|Drosophila melanogaster RH01580p pro... 30 0.58
BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p pro... 30 0.58
BT001417-1|AAN71172.1| 216|Drosophila melanogaster GH12433p pro... 30 0.58
AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p pro... 30 0.58
AY069302-1|AAL39447.1| 216|Drosophila melanogaster HL03687p pro... 30 0.58
AE014297-1724|AAX52949.1| 216|Drosophila melanogaster CG10851-P... 30 0.58
AE014297-1723|AAN13579.1| 216|Drosophila melanogaster CG10851-P... 30 0.58
AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-P... 30 0.58
AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-P... 30 0.58
AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-P... 30 0.58
AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-P... 30 0.58
X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketi... 30 0.76
X58983-1|CAA41732.1| 671|Drosophila melanogaster orthodenticle ... 29 1.0
BT011185-1|AAR88546.1| 542|Drosophila melanogaster RE10280p pro... 29 1.0
AE014298-1217|AAF46400.3| 671|Drosophila melanogaster CG12154-P... 29 1.0
AE014298-1216|AAX52481.1| 665|Drosophila melanogaster CG12154-P... 29 1.0
BT024250-1|ABC86312.1| 174|Drosophila melanogaster IP15874p pro... 27 5.4
AY069030-1|AAL39175.1| 433|Drosophila melanogaster GH01429p pro... 27 5.4
AE014297-2410|AAF55469.1| 433|Drosophila melanogaster CG7379-PA... 27 5.4
AY118358-1|AAM48387.1| 984|Drosophila melanogaster RE04357p pro... 27 7.1
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 26 9.4
AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC... 26 9.4
AE014298-2552|AAO41689.1| 1436|Drosophila melanogaster CG5424-PD... 26 9.4
AE014298-2551|AAF48718.2| 1436|Drosophila melanogaster CG5424-PB... 26 9.4
AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF... 26 9.4
>X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein.
Length = 350
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 183 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 214
>BT004500-1|AAO42664.1| 216|Drosophila melanogaster GH08123p
protein.
Length = 216
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 49 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 80
>BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p
protein.
Length = 350
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 183 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 214
>BT001750-1|AAN71505.1| 216|Drosophila melanogaster RH01580p
protein.
Length = 216
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 49 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 80
>BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p
protein.
Length = 350
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 183 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 214
>BT001417-1|AAN71172.1| 216|Drosophila melanogaster GH12433p
protein.
Length = 216
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 49 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 80
>AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p
protein.
Length = 350
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 183 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 214
>AY069302-1|AAL39447.1| 216|Drosophila melanogaster HL03687p
protein.
Length = 216
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 49 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 80
>AE014297-1724|AAX52949.1| 216|Drosophila melanogaster CG10851-PH,
isoform H protein.
Length = 216
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 49 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 80
>AE014297-1723|AAN13579.1| 216|Drosophila melanogaster CG10851-PG,
isoform G protein.
Length = 216
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 49 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 80
>AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-PB,
isoform B protein.
Length = 329
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 188 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 219
>AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-PE,
isoform E protein.
Length = 346
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 179 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 210
>AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-PC,
isoform C protein.
Length = 350
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 183 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 214
>AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-PA,
isoform A protein.
Length = 350
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 183 LVEDRRGGRSGGGGGSGRGRS-RSSSSRSRSRS 214
>X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketing
protein protein.
Length = 376
Score = 29.9 bits (64), Expect = 0.76
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 98 IVHSLRGCEFGDASGGGKGRSCRSTNSRSRAQN 196
+V RG G G G+GRS RS++SRSR+++
Sbjct: 188 LVEDRRGGASGGGGGSGRGRS-RSSSSRSRSRS 219
>X58983-1|CAA41732.1| 671|Drosophila melanogaster orthodenticle
protein.
Length = 671
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 131 DASGGGKGRSCRSTNSRSRAQN 196
+ASGGG G SC S+++ SR+ +
Sbjct: 146 NASGGGSGNSCSSSSANSRSNS 167
>BT011185-1|AAR88546.1| 542|Drosophila melanogaster RE10280p
protein.
Length = 542
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 131 DASGGGKGRSCRSTNSRSRAQN 196
+ASGGG G SC S+++ SR+ +
Sbjct: 140 NASGGGSGNSCSSSSANSRSNS 161
>AE014298-1217|AAF46400.3| 671|Drosophila melanogaster CG12154-PA,
isoform A protein.
Length = 671
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 131 DASGGGKGRSCRSTNSRSRAQN 196
+ASGGG G SC S+++ SR+ +
Sbjct: 146 NASGGGSGNSCSSSSANSRSNS 167
>AE014298-1216|AAX52481.1| 665|Drosophila melanogaster CG12154-PB,
isoform B protein.
Length = 665
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 131 DASGGGKGRSCRSTNSRSRAQN 196
+ASGGG G SC S+++ SR+ +
Sbjct: 140 NASGGGSGNSCSSSSANSRSNS 161
>BT024250-1|ABC86312.1| 174|Drosophila melanogaster IP15874p
protein.
Length = 174
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 128 GDASGGGKGRSCRSTNSRSRAQN 196
G+ASGGG G R+ + RSR +N
Sbjct: 65 GNASGGGGGELQRTGSKRSRRRN 87
>AY069030-1|AAL39175.1| 433|Drosophila melanogaster GH01429p
protein.
Length = 433
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 128 GDASGGGKGRSCRSTNSRSRAQN 196
G+ASGGG G R+ + RSR +N
Sbjct: 215 GNASGGGGGELQRTGSKRSRRRN 237
>AE014297-2410|AAF55469.1| 433|Drosophila melanogaster CG7379-PA
protein.
Length = 433
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 128 GDASGGGKGRSCRSTNSRSRAQN 196
G+ASGGG G R+ + RSR +N
Sbjct: 215 GNASGGGGGELQRTGSKRSRRRN 237
>AY118358-1|AAM48387.1| 984|Drosophila melanogaster RE04357p
protein.
Length = 984
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 53 AASRHRIHI*DEGLTIVHSLRGCEFGDASGGGKG 154
AA+ HR I TI HS G GD GGG G
Sbjct: 22 AAAAHRKSISQSRNTIYHSAVGLA-GDEGGGGSG 54
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 153 PFPPPLASPNSQPRRLCTIVRPSS 82
P PPPL +P Q R ++ +P+S
Sbjct: 731 PLPPPLRAPVQQQRNNLSVDQPNS 754
>AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC,
isoform C protein.
Length = 1509
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 153 PFPPPLASPNSQPRRLCTIVRPSS 82
P PPPL +P Q R ++ +P+S
Sbjct: 831 PLPPPLRAPVQQQRNNLSVDQPNS 854
>AE014298-2552|AAO41689.1| 1436|Drosophila melanogaster CG5424-PD,
isoform D protein.
Length = 1436
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 153 PFPPPLASPNSQPRRLCTIVRPSS 82
P PPPL +P Q R ++ +P+S
Sbjct: 758 PLPPPLRAPVQQQRNNLSVDQPNS 781
>AE014298-2551|AAF48718.2| 1436|Drosophila melanogaster CG5424-PB,
isoform B protein.
Length = 1436
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 153 PFPPPLASPNSQPRRLCTIVRPSS 82
P PPPL +P Q R ++ +P+S
Sbjct: 758 PLPPPLRAPVQQQRNNLSVDQPNS 781
>AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF,
isoform F protein.
Length = 1918
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 153 PFPPPLASPNSQPRRLCTIVRPSS 82
P PPPL +P Q R ++ +P+S
Sbjct: 1244 PLPPPLRAPVQQQRNNLSVDQPNS 1267
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,468,259
Number of Sequences: 53049
Number of extensions: 188997
Number of successful extensions: 807
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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