Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1651
(600 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5TA51 Cluster: Cleavage and polyadenylation specific f... 196 2e-49
UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific f... 196 2e-49
UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16; T... 196 2e-49
UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29; Eu... 196 2e-49
UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2; ... 192 7e-48
UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FE... 143 2e-33
UniRef50_Q5CRW9 Cluster: CPSF metallobeta-lactamase; n=2; Crypto... 142 6e-33
UniRef50_UPI0001555813 Cluster: PREDICTED: hypothetical protein,... 120 2e-26
UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein ECU10_... 110 2e-23
UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole... 104 2e-21
UniRef50_Q226C1 Cluster: Putative FEG protein; n=2; Tetrahymena ... 104 2e-21
UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificit... 104 2e-21
UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleava... 103 3e-21
UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase... 103 3e-21
UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2; ... 102 7e-21
UniRef50_A0CN06 Cluster: Chromosome undetermined scaffold_22, wh... 99 4e-20
UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106, w... 99 4e-20
UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|R... 97 2e-19
UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase... 95 9e-19
UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificit... 92 1e-17
UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity ... 90 4e-17
UniRef50_A5BWZ3 Cluster: Putative uncharacterized protein; n=1; ... 89 6e-17
UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2; Ascomycota|... 89 6e-17
UniRef50_Q4S6C2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 87 3e-16
UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Meta... 87 4e-16
UniRef50_Q8ZYD9 Cluster: MRNA 3'-end processing factor, conjectu... 85 1e-15
UniRef50_UPI00015BA9DD Cluster: beta-lactamase domain protein; n... 85 2e-15
UniRef50_A2D958 Cluster: RNA-metabolising metallo-beta-lactamase... 84 3e-15
UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity ... 83 4e-15
UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty... 83 5e-15
UniRef50_A1RTJ6 Cluster: Beta-lactamase domain protein; n=1; Pyr... 83 5e-15
UniRef50_UPI000049831F Cluster: cleavage and polyadenylation spe... 82 8e-15
UniRef50_Q4N0H3 Cluster: Putative uncharacterized protein; n=2; ... 82 1e-14
UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1; ... 81 1e-14
UniRef50_Q97AZ6 Cluster: Cleavage and polyadenylation specificit... 81 1e-14
UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metaz... 81 1e-14
UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15; Pezizomyco... 81 1e-14
UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular or... 81 1e-14
UniRef50_Q58633 Cluster: Uncharacterized protein MJ1236; n=16; E... 81 1e-14
UniRef50_A7AWH8 Cluster: RNA-metabolising metallo-beta-lactamase... 81 2e-14
UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificit... 79 6e-14
UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2; Saccharomyc... 79 8e-14
UniRef50_A1RWY8 Cluster: Beta-lactamase domain protein; n=1; The... 79 1e-13
UniRef50_Q72GW5 Cluster: Cleavage and polyadenylation specificit... 77 3e-13
UniRef50_Q5ZWR4 Cluster: Metallo-beta lactamase family; n=4; Leg... 75 1e-12
UniRef50_Q8TW11 Cluster: Predicted metal-dependent RNase, consis... 75 1e-12
UniRef50_A5K7P0 Cluster: RNA-metabolising metallo-beta-lactamase... 74 2e-12
UniRef50_Q18IP5 Cluster: Predicted metal-dependent RNase, consis... 74 3e-12
UniRef50_Q7QRM8 Cluster: GLP_171_24040_22178; n=1; Giardia lambl... 73 4e-12
UniRef50_A0RXV0 Cluster: Cleavage and polyadenylation specificit... 73 5e-12
UniRef50_Q74MJ3 Cluster: NEQ076; n=1; Nanoarchaeum equitans|Rep:... 72 9e-12
UniRef50_Q9RZ85 Cluster: Cleavage and polyadenylation specificit... 72 1e-11
UniRef50_Q9UXE8 Cluster: MRNA 3'-end polyadenylation factor; n=6... 72 1e-11
UniRef50_A5N1D0 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_A3ERC5 Cluster: Putative RNA-processing exonuclease; n=... 71 2e-11
UniRef50_O77371 Cluster: Cleavage and polyadenylation specificit... 71 2e-11
UniRef50_Q9YEQ9 Cluster: Putative exonuclease; n=1; Aeropyrum pe... 71 2e-11
UniRef50_A4CGY6 Cluster: Putative uncharacterized protein; n=4; ... 71 2e-11
UniRef50_A6C193 Cluster: Exonuclease of the beta-lactamase fold ... 70 5e-11
UniRef50_Q2LYC2 Cluster: Metallo-beta-lactamase protein; n=6; De... 69 8e-11
UniRef50_Q15V20 Cluster: RNA-metabolising metallo-beta-lactamase... 69 8e-11
UniRef50_Q9HS54 Cluster: MRNA 3'-end processing factor homolog; ... 69 8e-11
UniRef50_Q0HMU8 Cluster: RNA-metabolizing metallo-beta-lactamase... 68 1e-10
UniRef50_A5KKJ4 Cluster: Putative uncharacterized protein; n=1; ... 67 3e-10
UniRef50_Q7QYP3 Cluster: GLP_393_23867_26140; n=1; Giardia lambl... 67 3e-10
UniRef50_Q6MLH4 Cluster: Predicted exonuclease of the beta-lacta... 66 5e-10
UniRef50_A5ZRP6 Cluster: Putative uncharacterized protein; n=4; ... 66 8e-10
UniRef50_Q3ZY44 Cluster: Metallo-beta-lactamase family protein; ... 64 2e-09
UniRef50_Q4AMZ9 Cluster: Beta-lactamase-like:RNA-metabolising me... 64 2e-09
UniRef50_A4VJP5 Cluster: Metallo-beta-lactamase superfamily prot... 64 2e-09
UniRef50_Q2RJ88 Cluster: RNA-metabolising metallo-beta-lactamase... 64 2e-09
UniRef50_A4XI93 Cluster: Beta-lactamase domain protein; n=1; Cal... 64 2e-09
UniRef50_Q73MR4 Cluster: Metallo-beta-lactamase family protein; ... 64 3e-09
UniRef50_Q0LL72 Cluster: Beta-lactamase-like; n=3; Herpetosiphon... 64 3e-09
UniRef50_A6VTF2 Cluster: RNA-metabolising metallo-beta-lactamase... 64 3e-09
UniRef50_A7DQ83 Cluster: Beta-lactamase domain protein; n=1; Can... 64 3e-09
UniRef50_UPI00004992E1 Cluster: cleavage and polyadenylation spe... 63 4e-09
UniRef50_Q896M4 Cluster: Cleavage and polyadenylation specificit... 62 7e-09
UniRef50_Q1PVS7 Cluster: Putative uncharacterized protein; n=1; ... 62 7e-09
UniRef50_UPI00015BD54C Cluster: UPI00015BD54C related cluster; n... 62 1e-08
UniRef50_Q8RBU2 Cluster: Predicted exonuclease of the beta-lacta... 62 1e-08
UniRef50_Q8KET4 Cluster: Metallo-beta-lactamase superfamily prot... 62 1e-08
UniRef50_Q11BH9 Cluster: Beta-lactamase-like; n=6; Proteobacteri... 62 1e-08
UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q3AAG6 Cluster: Metallo-beta-lactamase family protein; ... 62 1e-08
UniRef50_A3I563 Cluster: Zn-dependent hydrolase, beta-lactamase ... 61 2e-08
UniRef50_A0JWK6 Cluster: Beta-lactamase domain protein; n=2; Bac... 61 2e-08
UniRef50_UPI00015BB212 Cluster: beta-lactamase domain protein; n... 60 3e-08
UniRef50_A0Q181 Cluster: Metallo-beta-lactamase family protein, ... 60 3e-08
UniRef50_A1RXC5 Cluster: Beta-lactamase domain protein; n=1; The... 60 3e-08
UniRef50_A4J2E1 Cluster: Beta-lactamase domain protein; n=1; Des... 60 4e-08
UniRef50_A3HWA3 Cluster: Metallo-beta-lactamase family protein; ... 60 4e-08
UniRef50_Q1NVJ9 Cluster: Beta-lactamase-like:RNA-metabolising me... 60 5e-08
UniRef50_Q9YFR8 Cluster: Putative exonuclease; n=1; Aeropyrum pe... 60 5e-08
UniRef50_A6E886 Cluster: Metallo-beta-lactamase superfamily prot... 59 9e-08
UniRef50_O87142 Cluster: WbfZ protein; n=32; Vibrionaceae|Rep: W... 58 2e-07
UniRef50_A1S0I1 Cluster: Beta-lactamase domain protein; n=1; The... 58 2e-07
UniRef50_Q8DE34 Cluster: Predicted exonuclease of the beta-lacta... 58 2e-07
UniRef50_Q6N2A1 Cluster: Beta-lactamase-like; n=12; Rhizobiales|... 58 2e-07
UniRef50_Q5WCW7 Cluster: Beta-lactamase superfamily Zn-dependent... 58 2e-07
UniRef50_Q023M0 Cluster: Beta-lactamase domain protein; n=1; Sol... 58 2e-07
UniRef50_Q9AA00 Cluster: Metallo-beta-lactamase family protein; ... 57 3e-07
UniRef50_Q2G7Y1 Cluster: Beta-lactamase-like protein; n=1; Novos... 57 3e-07
UniRef50_Q9LKF9 Cluster: Cleavage and polyadenylation specificit... 57 3e-07
UniRef50_A6Q9T8 Cluster: RNA-metabolising metallo-beta-lactamase... 57 4e-07
UniRef50_A7QCN8 Cluster: Chromosome chr12 scaffold_78, whole gen... 57 4e-07
UniRef50_Q5QU60 Cluster: Predicted exonuclease of the beta-lacta... 56 5e-07
UniRef50_A7HPZ1 Cluster: Beta-lactamase domain protein; n=2; Alp... 56 5e-07
UniRef50_A5BWD3 Cluster: Putative uncharacterized protein; n=3; ... 56 6e-07
UniRef50_A7DPN0 Cluster: Beta-lactamase domain protein; n=1; Can... 56 6e-07
UniRef50_Q60355 Cluster: Uncharacterized protein MJ0047; n=6; Me... 55 1e-06
UniRef50_Q7UMQ3 Cluster: Cleavage and polyadenylation specifity ... 55 1e-06
UniRef50_Q12E81 Cluster: Beta-lactamase-like; n=14; Proteobacter... 55 1e-06
UniRef50_A7CRQ7 Cluster: Beta-lactamase domain protein; n=1; Opi... 55 1e-06
UniRef50_A1SFD7 Cluster: Beta-lactamase domain protein; n=2; Bac... 55 1e-06
UniRef50_A0RY50 Cluster: Exonuclease of the beta-lactamase fold;... 55 1e-06
UniRef50_O17403 Cluster: Probable cleavage and polyadenylation s... 55 1e-06
UniRef50_A3WMD7 Cluster: Predicted exonuclease of the beta-lacta... 54 2e-06
UniRef50_A0JUX7 Cluster: Beta-lactamase domain protein; n=25; Ba... 54 2e-06
UniRef50_Q8RAH0 Cluster: Predicted hydrolase of the metallo-beta... 53 6e-06
UniRef50_Q1B028 Cluster: Beta-lactamase-like protein; n=1; Rubro... 52 8e-06
UniRef50_A0LI39 Cluster: Beta-lactamase domain protein; n=1; Syn... 52 8e-06
UniRef50_Q2GCU7 Cluster: Metallo-beta-lactamase family, beta-CAS... 52 1e-05
UniRef50_Q11PK2 Cluster: Metallo-beta-lactamase superfamily prot... 52 1e-05
UniRef50_A1ID10 Cluster: Metallo-beta-lactamase family protein; ... 52 1e-05
UniRef50_Q8WPK6 Cluster: Similar to cleavage and polyadenylation... 52 1e-05
UniRef50_Q57626 Cluster: Uncharacterized protein MJ0162; n=6; Me... 52 1e-05
UniRef50_Q194D1 Cluster: Beta-lactamase-like; n=3; Clostridia|Re... 52 1e-05
UniRef50_Q1IJR0 Cluster: Beta-lactamase-like; n=1; Acidobacteria... 51 2e-05
UniRef50_A7H6H0 Cluster: Beta-lactamase domain protein; n=2; Ana... 51 2e-05
UniRef50_P56185 Cluster: UPF0036 protein HP_1430; n=26; Epsilonp... 51 2e-05
UniRef50_Q9FMW0 Cluster: Genomic DNA, chromosome 5, P1 clone:MLE... 51 2e-05
UniRef50_Q2S180 Cluster: Ysh1p: subunit of polyadenylation facto... 50 3e-05
UniRef50_Q2AEK6 Cluster: Beta-lactamase-like:RNA-metabolising me... 50 3e-05
UniRef50_Q74C32 Cluster: Metallo-beta-lactamase family protein; ... 50 4e-05
UniRef50_A5URN4 Cluster: Beta-lactamase domain protein; n=5; Chl... 50 4e-05
UniRef50_A7PHF3 Cluster: Chromosome chr17 scaffold_16, whole gen... 50 4e-05
UniRef50_A2EDT7 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q980D0 Cluster: MRNA 3'-end processing factor, putative... 50 6e-05
UniRef50_Q8ZTD5 Cluster: MRNA 3'-end processing factor, conjectu... 50 6e-05
UniRef50_A3DMW0 Cluster: Beta-lactamase domain protein; n=1; Sta... 50 6e-05
UniRef50_A4RR19 Cluster: Predicted protein; n=1; Ostreococcus lu... 49 7e-05
UniRef50_Q0W8H2 Cluster: MRNA 3-end processing factor; n=5; Eury... 49 1e-04
UniRef50_Q605H9 Cluster: Metallo-beta-lactamase family protein; ... 48 1e-04
UniRef50_A6PE29 Cluster: Beta-lactamase domain protein; n=1; She... 48 2e-04
UniRef50_A4XTF4 Cluster: Beta-lactamase domain protein; n=12; Ga... 48 2e-04
UniRef50_Q3LW64 Cluster: Regulator of transcription that contain... 48 2e-04
UniRef50_A2BK26 Cluster: Putative exoribonuclease; n=1; Hyperthe... 48 2e-04
UniRef50_Q04EG7 Cluster: Predicted hydrolase of the metallo-beta... 47 3e-04
UniRef50_A1I7A4 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation s... 47 3e-04
UniRef50_Q1DC87 Cluster: Metallo-beta-lactamase family protein; ... 47 4e-04
UniRef50_A6Q3H4 Cluster: RNA-metabolising metallo-beta-lactamase... 47 4e-04
UniRef50_A1VFA6 Cluster: Beta-lactamase domain protein; n=4; Des... 47 4e-04
UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31; A... 47 4e-04
UniRef50_Q1IPV7 Cluster: Beta-lactamase-like precursor; n=2; Aci... 46 5e-04
UniRef50_Q0EST3 Cluster: Beta-lactamase-like; n=2; Thermoanaerob... 46 5e-04
UniRef50_A5TU13 Cluster: Metal-dependent hydrolase; n=3; Fusobac... 46 5e-04
UniRef50_A4EC75 Cluster: Putative uncharacterized protein; n=1; ... 46 5e-04
UniRef50_A1ZG78 Cluster: Exonuclease of the beta-lactamase fold ... 46 5e-04
UniRef50_Q01GI5 Cluster: Polyadenylation cleavage/specificity fa... 46 5e-04
UniRef50_Q07ZA5 Cluster: Beta-lactamase domain protein; n=3; Alt... 46 7e-04
UniRef50_Q5NLC0 Cluster: Metallo-beta-lactamase hydrolase subuni... 45 0.001
UniRef50_Q5GSG7 Cluster: Predicted hydrolase of the metallo-beta... 45 0.001
UniRef50_Q1GQ91 Cluster: Beta-lactamase-like protein; n=43; Bact... 45 0.001
UniRef50_Q9NV88 Cluster: Integrator complex subunit 9; n=41; Eum... 45 0.001
UniRef50_A3ZTP5 Cluster: Metallo-beta-lactamase family protein; ... 44 0.003
UniRef50_Q2YZG4 Cluster: Predicted exonuclease of the beta-lacta... 44 0.004
UniRef50_Q2LTE7 Cluster: Metallo-beta-lactamase superfamily; n=1... 43 0.005
UniRef50_A4SYL2 Cluster: RNA-metabolising metallo-beta-lactamase... 43 0.005
UniRef50_A0RTJ7 Cluster: Hydrolase of the metallo-beta-lactamase... 43 0.005
UniRef50_Q9P2I0 Cluster: Cleavage and polyadenylation specificit... 43 0.006
UniRef50_Q4S732 Cluster: Chromosome 14 SCAF14723, whole genome s... 42 0.008
UniRef50_A6VTQ0 Cluster: Beta-lactamase domain protein; n=9; Pro... 42 0.011
UniRef50_UPI000049A022 Cluster: cleavage and polyadenylation spe... 42 0.015
UniRef50_Q0C1C8 Cluster: Metallo-beta-lactamase family protein; ... 42 0.015
UniRef50_P47385 Cluster: UPF0036 protein MG139; n=4; Mycoplasma|... 42 0.015
UniRef50_Q3UGU6 Cluster: Melanocyte cDNA, RIKEN full-length enri... 41 0.019
UniRef50_A7Q525 Cluster: Chromosome undetermined scaffold_51, wh... 41 0.019
UniRef50_Q6MTU5 Cluster: CONSERVED HYPOTEHTICAL PROTEIN; n=3; Mo... 41 0.026
UniRef50_Q6KH27 Cluster: Predicted hydrolase; n=13; Mycoplasma|R... 41 0.026
UniRef50_Q1NUX3 Cluster: Beta-lactamase-like:RNA-metabolising me... 41 0.026
UniRef50_Q1AW46 Cluster: Putative uncharacterized protein; n=1; ... 41 0.026
UniRef50_Q03AI9 Cluster: Predicted hydrolase of the metallo-beta... 41 0.026
UniRef50_A0WB37 Cluster: DNA internalization-related competence ... 41 0.026
UniRef50_A7RPX1 Cluster: Predicted protein; n=1; Nematostella ve... 41 0.026
UniRef50_Q1IUF3 Cluster: Beta-lactamase-like precursor; n=1; Aci... 40 0.034
UniRef50_Q748A2 Cluster: Metallo-beta-lactamase family protein; ... 40 0.045
UniRef50_Q2SRM2 Cluster: Metallo-beta-lactamase superfamily prot... 40 0.045
UniRef50_Q50EJ8 Cluster: Metallo-beta-lactamase superfamily hydr... 40 0.045
UniRef50_Q5V0H4 Cluster: MRNA 3'-end processing factor; n=4; Hal... 40 0.045
UniRef50_A7D2T2 Cluster: Beta-lactamase domain protein; n=1; Hal... 40 0.045
UniRef50_Q02AY2 Cluster: Beta-lactamase domain protein; n=2; Bac... 40 0.059
UniRef50_A7AAI5 Cluster: Putative uncharacterized protein; n=2; ... 40 0.059
UniRef50_Q3LWF4 Cluster: Ysh1 3' mRNA end processing factor; n=1... 40 0.059
UniRef50_A6NRM5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.078
UniRef50_Q024Z8 Cluster: Beta-lactamase domain protein precursor... 39 0.10
UniRef50_Q8TVW4 Cluster: Predicted hydrolase of the metallo-beta... 39 0.10
UniRef50_Q58271 Cluster: UPF0036 protein MJ0861; n=15; Archaea|R... 39 0.10
UniRef50_Q82SI4 Cluster: Metallo-beta-lactamase superfamily; n=4... 38 0.14
UniRef50_Q6F968 Cluster: Competence factor involved in DNA uptak... 38 0.14
UniRef50_Q6L0H4 Cluster: MRNA 3'-end processing factor; n=4; The... 38 0.14
UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium lot... 38 0.18
UniRef50_Q97S10 Cluster: Metallo-beta-lactamase superfamily prot... 38 0.18
UniRef50_Q8YS71 Cluster: All3220 protein; n=10; Cyanobacteria|Re... 38 0.18
UniRef50_Q4L6T9 Cluster: Similar to ComEC late competence protei... 38 0.18
UniRef50_A6CVL4 Cluster: Beta-lactamase-like protein; n=1; Vibri... 38 0.18
UniRef50_A0W430 Cluster: Beta-lactamase-like; n=1; Geobacter lov... 38 0.18
UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.18
UniRef50_Q5KIP3 Cluster: Cleavage and polyadenylation specificit... 38 0.18
UniRef50_A1S008 Cluster: Beta-lactamase domain protein; n=1; The... 38 0.18
UniRef50_Q9K9I5 Cluster: BH2662 protein; n=43; Bacteria|Rep: BH2... 38 0.24
UniRef50_Q1ATH2 Cluster: Beta-lactamase-like protein; n=1; Rubro... 38 0.24
UniRef50_A6TMT5 Cluster: Beta-lactamase domain protein; n=1; Alk... 38 0.24
UniRef50_A7I6D7 Cluster: Beta-lactamase domain protein; n=1; Can... 38 0.24
UniRef50_Q8DAV3 Cluster: Rec2-related protein; n=2; Vibrio vulni... 37 0.32
UniRef50_Q72BD6 Cluster: Metallo-beta-lactamase family protein; ... 37 0.32
UniRef50_Q0EY53 Cluster: Putative uncharacterized protein; n=1; ... 37 0.32
UniRef50_A5D4E8 Cluster: Predicted exonuclease of the beta-lacta... 37 0.32
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.32
UniRef50_A2EZM9 Cluster: Metallo-beta-lactamase superfamily prot... 37 0.32
UniRef50_Q9HKD3 Cluster: Putative uncharacterized protein Ta0668... 37 0.32
UniRef50_Q18IK7 Cluster: Ribonuclease Z; n=1; Haloquadratum wals... 37 0.32
UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily prot... 37 0.42
UniRef50_A6LS78 Cluster: Beta-lactamase domain protein precursor... 37 0.42
UniRef50_P54123 Cluster: UPF0036 protein slr0551; n=38; Cyanobac... 37 0.42
UniRef50_A7DE09 Cluster: Beta-lactamase domain protein; n=2; Met... 36 0.55
UniRef50_A6PKD4 Cluster: Beta-lactamase domain protein precursor... 36 0.55
UniRef50_A5IIH1 Cluster: Metal-dependent hydrolase of the beta-l... 36 0.55
UniRef50_Q9HLY7 Cluster: Putative uncharacterized protein Ta0086... 36 0.55
UniRef50_Q55470 Cluster: Uncharacterized protein sll0514; n=1; S... 36 0.55
UniRef50_UPI0000E0E5B0 Cluster: Beta-lactamase-like protein; n=1... 36 0.73
UniRef50_Q5SJ74 Cluster: Metallo-beta-lactamase superfamily prot... 36 0.73
UniRef50_Q2JNE4 Cluster: Metallo-beta-lactamase family protein; ... 36 0.73
UniRef50_Q1PWM3 Cluster: Similar to competence protein ComA; n=1... 36 0.73
UniRef50_Q0LNU4 Cluster: Beta-lactamase-like; n=1; Herpetosiphon... 36 0.73
UniRef50_A5CEC6 Cluster: Metallo-beta-lactamase family protein; ... 36 0.73
UniRef50_A4EC58 Cluster: Putative uncharacterized protein; n=1; ... 36 0.73
UniRef50_A3ERL5 Cluster: Putative hydrolase of the metallo-beta-... 36 0.73
UniRef50_O29718 Cluster: MRNA 3'-end processing factor, putative... 36 0.73
UniRef50_Q0W6M0 Cluster: Metallo-beta-lactamase; n=3; Euryarchae... 36 0.73
UniRef50_A4YGQ9 Cluster: Beta-lactamase domain protein; n=3; Sul... 36 0.73
UniRef50_Q45493 Cluster: UPF0036 protein ykqC; n=110; Bacilli|Re... 36 0.73
UniRef50_UPI00015B9771 Cluster: UPI00015B9771 related cluster; n... 36 0.97
UniRef50_A0VNF9 Cluster: Beta-lactamase domain protein; n=7; Rho... 36 0.97
UniRef50_Q387M8 Cluster: Cleavage and polyadenylation specificit... 36 0.97
UniRef50_Q4PAM2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.97
UniRef50_UPI0000164CFE Cluster: hypothetical protein DR_2417m; n... 35 1.3
UniRef50_Q9K890 Cluster: BH3116 protein; n=19; Bacillaceae|Rep: ... 35 1.3
UniRef50_Q0LFP8 Cluster: Beta-lactamase-like; n=1; Herpetosiphon... 35 1.3
UniRef50_A7H6C5 Cluster: Beta-lactamase domain protein; n=2; Ana... 35 1.3
UniRef50_A5N479 Cluster: Predicted hydrolase; n=1; Clostridium k... 35 1.3
UniRef50_A5N0B8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_A4YR56 Cluster: Putative uncharacterized protein; n=2; ... 35 1.3
UniRef50_Q331V3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q8TXA0 Cluster: Predicted hydrolase of the metallo-beta... 35 1.3
UniRef50_Q8PSY2 Cluster: Metal dependent hydrolase; n=4; Methano... 35 1.3
UniRef50_O28127 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q92MK8 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_Q41CQ7 Cluster: Beta-lactamase-like; n=1; Exiguobacteri... 35 1.7
UniRef50_Q1NXK1 Cluster: Beta-lactamase-like:RNA-metabolising me... 35 1.7
UniRef50_Q1GX24 Cluster: Beta-lactamase-like protein; n=2; Alpha... 35 1.7
UniRef50_Q0B1F4 Cluster: Beta-lactamase domain protein; n=1; Bur... 35 1.7
UniRef50_Q02B47 Cluster: Beta-lactamase domain protein precursor... 35 1.7
UniRef50_A6EA02 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_A5KS50 Cluster: Beta-lactamase domain protein; n=1; can... 35 1.7
UniRef50_A5D3Z5 Cluster: Predicted hydrolase; n=1; Pelotomaculum... 35 1.7
UniRef50_A4BLQ3 Cluster: Dihydropteroate synthase; n=1; Nitrococ... 35 1.7
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 35 1.7
UniRef50_A0UYT6 Cluster: DNA internalization-related competence ... 35 1.7
UniRef50_Q823Y9 Cluster: Metal-dependent hydrolase, putative; n=... 34 2.2
UniRef50_Q5X8R0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q1MYS7 Cluster: Beta-lactamase related protein; n=1; Oc... 34 2.2
UniRef50_A7FRE4 Cluster: Metallo-beta-lactamase family protein; ... 34 2.2
UniRef50_A0X2P5 Cluster: Beta-lactamase domain protein; n=2; Alt... 34 2.2
UniRef50_Q011B3 Cluster: Putative metallo beta subunit lactamase... 34 2.2
UniRef50_Q4QA79 Cluster: Cleavage and polyadenylation specificit... 34 2.2
UniRef50_Q8U848 Cluster: ABC transporter, membrane spanning prot... 34 2.9
UniRef50_Q7UM92 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q2AF62 Cluster: Beta-lactamase-like; n=1; Halothermothr... 34 2.9
UniRef50_Q15Z46 Cluster: Beta-lactamase-like; n=2; Alteromonadal... 34 2.9
UniRef50_A6TST8 Cluster: Beta-lactamase domain protein; n=1; Alk... 34 2.9
UniRef50_A6GF82 Cluster: Metal-dependent Hydrolase of the beta-l... 34 2.9
UniRef50_Q5ASU5 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_A4STH4 Cluster: Anaerobic nitric oxide reductase flavor... 34 2.9
UniRef50_Q8EVN2 Cluster: Putative uncharacterized protein MYPE52... 33 3.9
UniRef50_Q89RI1 Cluster: Bll2791 protein; n=29; Bacteria|Rep: Bl... 33 3.9
UniRef50_Q1IVQ6 Cluster: Beta-lactamase-like protein precursor; ... 33 3.9
UniRef50_Q1ISV3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q1IJ31 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q1GJ92 Cluster: Beta-lactamase-like protein; n=4; Rhodo... 33 3.9
UniRef50_Q128F6 Cluster: Beta-lactamase-like; n=8; Burkholderial... 33 3.9
UniRef50_Q120B9 Cluster: Beta-lactamase-like; n=1; Polaromonas s... 33 3.9
UniRef50_Q01V77 Cluster: Beta-lactamase domain protein precursor... 33 3.9
UniRef50_A3WH09 Cluster: Arylsulfatase; n=1; Erythrobacter sp. N... 33 3.9
UniRef50_A0T8Q6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_A0Q3S0 Cluster: Metallo-beta-lactamase superfamily prot... 33 3.9
UniRef50_A7S9Y8 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.9
UniRef50_Q6CLJ0 Cluster: Similar to sgd|S0002884 Saccharomyces c... 33 3.9
UniRef50_A7I7Q8 Cluster: Beta-lactamase domain protein; n=1; Can... 33 3.9
UniRef50_A2SUA2 Cluster: Beta-lactamase domain protein; n=1; Met... 33 3.9
UniRef50_P20581 Cluster: Uncharacterized protein PA1000; n=8; Ps... 33 3.9
UniRef50_UPI000038E4D8 Cluster: hypothetical protein Faci_030006... 33 5.1
UniRef50_Q5L050 Cluster: Hypothetical conserved protein; n=3; Ba... 33 5.1
UniRef50_Q6SI24 Cluster: Recombination protein-related protein; ... 33 5.1
UniRef50_Q12M67 Cluster: Putative uncharacterized protein precur... 33 5.1
UniRef50_Q0RZX1 Cluster: Possible beta-lactamase; n=5; Actinomyc... 33 5.1
UniRef50_A4CK03 Cluster: Ribonuclease Z; n=4; Flavobacteriaceae|... 33 5.1
UniRef50_Q20700 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1
UniRef50_A7S7X0 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.1
UniRef50_A4WIL3 Cluster: Beta-lactamase domain protein; n=4; Pyr... 33 5.1
UniRef50_UPI000023D29B Cluster: hypothetical protein FG06635.1; ... 33 6.8
UniRef50_Q988B9 Cluster: Mlr6805 protein; n=1; Mesorhizobium lot... 33 6.8
UniRef50_Q65JA2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_Q5FUV1 Cluster: Metal-dependent hydrolase; n=4; Rhodosp... 33 6.8
UniRef50_Q4A0L9 Cluster: Similar to quorum-quenching N-acyl homo... 33 6.8
UniRef50_Q31H21 Cluster: DNA internalization-related competence ... 33 6.8
UniRef50_Q2LSY9 Cluster: Zn-dependent hydrolase including glyoxy... 33 6.8
UniRef50_Q2AIR4 Cluster: Beta-lactamase-like:Flavodoxin/nitric o... 33 6.8
UniRef50_Q0AW46 Cluster: Zn-dependent hydrolase including glyoxy... 33 6.8
UniRef50_A6GS28 Cluster: Beta-lactamase-like protein; n=1; Limno... 33 6.8
UniRef50_A6FNJ5 Cluster: Beta-lactamase-like protein; n=1; Roseo... 33 6.8
UniRef50_A5CSG3 Cluster: Complete genome; n=1; Clavibacter michi... 33 6.8
UniRef50_A4EYE5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_A4EQ82 Cluster: Beta-lactamase-like protein; n=1; Roseo... 33 6.8
UniRef50_A4A4Y0 Cluster: Protein, putative metallo-beta-lactamas... 33 6.8
UniRef50_Q7YXA4 Cluster: Putative uncharacterized protein sru-45... 33 6.8
UniRef50_A7I6N7 Cluster: Beta-lactamase domain protein; n=1; Can... 33 6.8
UniRef50_UPI0000498FF1 Cluster: conserved hypothetical protein; ... 32 9.0
UniRef50_Q7P0U4 Cluster: Competence protein; n=1; Chromobacteriu... 32 9.0
UniRef50_Q2LXM4 Cluster: Zn-dependent hydrolases, including glyo... 32 9.0
UniRef50_O34760 Cluster: YtnP; n=1; Bacillus subtilis|Rep: YtnP ... 32 9.0
UniRef50_Q6VV60 Cluster: Competence protein; n=2; Acinetobacter ... 32 9.0
UniRef50_Q2AGK8 Cluster: Beta-lactamase-like; n=1; Halothermothr... 32 9.0
UniRef50_Q04W68 Cluster: Zn-dependent hydrolase; n=4; Leptospira... 32 9.0
UniRef50_A7IFU4 Cluster: Beta-lactamase domain protein precursor... 32 9.0
UniRef50_A6LEX6 Cluster: Putative metal-dependent hydrolase; n=2... 32 9.0
UniRef50_A5TRV9 Cluster: Possible hydrolase; n=1; Fusobacterium ... 32 9.0
UniRef50_A2SBT9 Cluster: CAMP phosphodiesterases, class-II, meta... 32 9.0
UniRef50_A0Z1Y7 Cluster: Beta-lactamase; n=2; unclassified Gamma... 32 9.0
UniRef50_A0YHA6 Cluster: DNA internalization-related competence ... 32 9.0
UniRef50_Q570G3 Cluster: Hydrolase like protein; n=6; Magnolioph... 32 9.0
UniRef50_Q22B11 Cluster: Metallo-beta-lactamase superfamily prot... 32 9.0
UniRef50_A2E6V3 Cluster: Beta lactamase, putative; n=2; Trichomo... 32 9.0
UniRef50_Q8ZT63 Cluster: Putative uncharacterized protein PAE341... 32 9.0
>UniRef50_Q5TA51 Cluster: Cleavage and polyadenylation specific
factor 3-like; n=2; Homo sapiens|Rep: Cleavage and
polyadenylation specific factor 3-like - Homo sapiens
(Human)
Length = 308
Score = 196 bits (479), Expect = 2e-49
Identities = 82/105 (78%), Positives = 95/105 (90%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 395
MP+I++TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMG+ND+RRFPDFSYI G +T
Sbjct: 20 MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDF 79
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+DCVIISHFHLDHCGALPY SEM+GY GPIYMTHPT+AI PILLE
Sbjct: 80 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLE 124
>UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific
factor 3-like; n=4; Eutheria|Rep: Cleavage and
polyadenylation specific factor 3-like - Homo sapiens
(Human)
Length = 401
Score = 196 bits (479), Expect = 2e-49
Identities = 82/105 (78%), Positives = 95/105 (90%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 395
MP+I++TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMG+ND+RRFPDFSYI G +T
Sbjct: 13 MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDF 72
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+DCVIISHFHLDHCGALPY SEM+GY GPIYMTHPT+AI PILLE
Sbjct: 73 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLE 117
>UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16;
Theria|Rep: Uncharacterized protein CPSF3L - Homo
sapiens (Human)
Length = 277
Score = 196 bits (479), Expect = 2e-49
Identities = 82/105 (78%), Positives = 95/105 (90%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 395
MP+I++TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMG+ND+RRFPDFSYI G +T
Sbjct: 1 MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDF 60
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+DCVIISHFHLDHCGALPY SEM+GY GPIYMTHPT+AI PILLE
Sbjct: 61 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLE 105
>UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29;
Eukaryota|Rep: Integrator complex subunit 11 - Homo
sapiens (Human)
Length = 600
Score = 196 bits (479), Expect = 2e-49
Identities = 82/105 (78%), Positives = 95/105 (90%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 395
MP+I++TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMG+ND+RRFPDFSYI G +T
Sbjct: 1 MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDF 60
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+DCVIISHFHLDHCGALPY SEM+GY GPIYMTHPT+AI PILLE
Sbjct: 61 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLE 105
>UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 608
Score = 192 bits (467), Expect = 7e-48
Identities = 81/105 (77%), Positives = 95/105 (90%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 395
+P+IKI PLGAGQDVGRSCIL+T+GGKNIM+DCGMHMGY D+RRFPDFSYI G +T
Sbjct: 5 IPEIKIVPLGAGQDVGRSCILITIGGKNIMVDCGMHMGYQDDRRFPDFSYIGGGGRLTDY 64
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+DCVIISHFHLDHCG+LP+MSE++GY GPIYMT+PTKAI P+LLE
Sbjct: 65 LDCVIISHFHLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLE 109
>UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FEG
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 613
Score = 143 bits (347), Expect = 2e-33
Identities = 56/97 (57%), Positives = 78/97 (80%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
LGAGQ++G+SC+++T+ GK IM DCGMHMG +D R+P+FS I G + I C+II+H
Sbjct: 8 LGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITH 67
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
FH+DH GALPY +E+ GY GPIYM++PTKA++P++LE
Sbjct: 68 FHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLE 104
>UniRef50_Q5CRW9 Cluster: CPSF metallobeta-lactamase; n=2;
Cryptosporidium|Rep: CPSF metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 751
Score = 142 bits (344), Expect = 6e-33
Identities = 64/104 (61%), Positives = 78/104 (75%), Gaps = 3/104 (2%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYI-VPEGP--ITSQ 395
I I PLGAGQDVGRSCI+ +G K +M DCGMHMG+ DER++PDF I P I
Sbjct: 5 ISIIPLGAGQDVGRSCIIAKIGSKTVMFDCGMHMGFKDERKYPDFRLISATLDPLIINEY 64
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
ID VIISH+HLDHCGALP+ +E IGY GPI MT+PTK+++ +LL
Sbjct: 65 IDLVIISHYHLDHCGALPFFTEKIGYKGPIVMTYPTKSVSSVLL 108
>UniRef50_UPI0001555813 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 513
Score = 120 bits (290), Expect = 2e-26
Identities = 50/66 (75%), Positives = 60/66 (90%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 395
MP+IK+TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMGYND+RRFPDFSYI G +T+
Sbjct: 1 MPEIKVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGYNDDRRFPDFSYITQSGRLTNF 60
Query: 396 IDCVII 413
+DCVII
Sbjct: 61 LDCVII 66
>UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein
ECU10_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU10_0900 - Encephalitozoon
cuniculi
Length = 730
Score = 110 bits (265), Expect = 2e-23
Identities = 53/101 (52%), Positives = 67/101 (66%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
IKI PLGAG +VGRSC+++ GG+ IMLDCG+H Y P F +V S+ID
Sbjct: 94 IKIMPLGAGNEVGRSCVIVECGGRTIMLDCGVHPAYTGMASLP-FLDLVD----LSKIDA 148
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V I+HFHLDH ALP+++E + G +YMTHPTKAI LL
Sbjct: 149 VFITHFHLDHAAALPFLTEKTSFRGKVYMTHPTKAILKWLL 189
>UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7053, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 810
Score = 104 bits (249), Expect = 2e-21
Identities = 51/99 (51%), Positives = 63/99 (63%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 410
I PLGAGQ+VGRSCI+L G+ IMLDCG+H G P I P ++ID ++
Sbjct: 11 IRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDP-----AEIDLLL 65
Query: 411 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
ISHFHLDHCGALP+ + + G +MTH TKAI LL
Sbjct: 66 ISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLL 104
>UniRef50_Q226C1 Cluster: Putative FEG protein; n=2; Tetrahymena
thermophila SB210|Rep: Putative FEG protein -
Tetrahymena thermophila SB210
Length = 178
Score = 104 bits (249), Expect = 2e-21
Identities = 58/115 (50%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Frame = +3
Query: 204 VKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYI----- 368
+K + I++ PLGAGQDVGRS CG+HMG ND R+PDF I
Sbjct: 3 LKNVKDCIEVYPLGAGQDVGRSY-------------CGLHMGVNDLTRYPDFEKIKQIWN 49
Query: 369 VPEGPITSQI-DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+PE QI D V+ISHFHLDH GALPY +E+ Y GPIYMT PTKA+ P + E
Sbjct: 50 IPEKRKWDQIIDLVLISHFHLDHIGALPYFTEIYNYDGPIYMTSPTKALLPYMCE 104
>UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificity
factor subunit 3; n=53; Eumetazoa|Rep: Cleavage and
polyadenylation specificity factor subunit 3 - Homo
sapiens (Human)
Length = 684
Score = 104 bits (249), Expect = 2e-21
Identities = 51/99 (51%), Positives = 63/99 (63%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 410
I PLGAGQ+VGRSCI+L G+ IMLDCG+H G P I P ++ID ++
Sbjct: 14 IRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDP-----AEIDLLL 68
Query: 411 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
ISHFHLDHCGALP+ + + G +MTH TKAI LL
Sbjct: 69 ISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLL 107
>UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleavage
and polyadenylation specificity factor, 73 kDa subunit;
n=2; Dictyostelium discoideum|Rep: Similar to Homo
sapiens (Human). Cleavage and polyadenylation
specificity factor, 73 kDa subunit - Dictyostelium
discoideum (Slime mold)
Length = 774
Score = 103 bits (247), Expect = 3e-21
Identities = 47/101 (46%), Positives = 65/101 (64%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
++ITP+G+G +VGRSC+LL GK +M DCG+H Y+ P F I + P ID
Sbjct: 36 LEITPIGSGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPFFDSIESDIP---DIDL 92
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+++SHFHLDH A+PY + G ++MTHPTKAI +LL
Sbjct: 93 LLVSHFHLDHAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLL 133
>UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Tetrahymena thermophila SB210|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Tetrahymena thermophila SB210
Length = 750
Score = 103 bits (247), Expect = 3e-21
Identities = 51/97 (52%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 410
I PLGAGQ+VGRSCI+L GK IM DCG+HMG N P F I P+ QID +
Sbjct: 3 IYPLGAGQEVGRSCIILEYKGKTIMFDCGLHMGKNGHASLPYFDNIKPD-----QIDIIF 57
Query: 411 ISHFHLDHCGALPYMSEMIGYTG---PIYMTHPTKAI 512
I+HFHLDHC ALPY + G +Y T PT+AI
Sbjct: 58 ITHFHLDHCAALPYFIAKTDFDGKKQKVYATSPTRAI 94
>UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 707
Score = 102 bits (244), Expect = 7e-21
Identities = 48/98 (48%), Positives = 64/98 (65%)
Frame = +3
Query: 234 TPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVII 413
TPLG+GQ+VGRSC LL GK +MLDCG+H G + P ++ E ID ++I
Sbjct: 14 TPLGSGQEVGRSCHLLEYKGKRVMLDCGVHPGLHGVDALPFVDFVEIEN-----IDLLLI 68
Query: 414 SHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+HFHLDHCGALP++ + + G +MTH TKAI +LL
Sbjct: 69 THFHLDHCGALPWLLQKTAFQGKCFMTHATKAIYRMLL 106
>UniRef50_A0CN06 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 484
Score = 99 bits (238), Expect = 4e-20
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = +3
Query: 303 MLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMI--GYT 476
MLDCG+HM + D RRFPDFS ++ E +D V+I+HFHLDHCGALPY +E+ GY
Sbjct: 1 MLDCGLHMTHQDNRRFPDFS-LIEEKLGRKYVDLVLITHFHLDHCGALPYFTELYGNGYN 59
Query: 477 GPIYMTHPTKAIAPILLE 530
GP+ M+ PTKA+ P +LE
Sbjct: 60 GPVVMSMPTKALLPYMLE 77
>UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 690
Score = 99 bits (238), Expect = 4e-20
Identities = 51/102 (50%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDE--RRFPDFSYIVPEGPITSQIDC 404
ITPLGAG +VGRSCILL K IM DCG+HM ++ P F+ I ID
Sbjct: 10 ITPLGAGNEVGRSCILLQFQEKQIMFDCGIHMNKENKGVMALPYFNKIDK----IEDIDL 65
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
++I+HFHLDHCGALPY + + G IYMT PTK I ++L+
Sbjct: 66 ILITHFHLDHCGALPYFLKNYKFKGKIYMTTPTKEIYGLVLK 107
>UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 767
Score = 97.5 bits (232), Expect = 2e-19
Identities = 43/102 (42%), Positives = 63/102 (61%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
++I PLGAG +VGRSC++ K +M DCG+H GY P F I + +D
Sbjct: 12 LEIIPLGAGSEVGRSCVIARYKQKTLMFDCGIHPGYAGLASLPYFDEID-----LADVDA 66
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+ ++HFHLDHC A+P++ + G I+MTHPTKAI +L++
Sbjct: 67 LFVTHFHLDHCAAVPFLCGRTDFNGRIFMTHPTKAIYHMLMQ 108
>UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Trichomonas vaginalis G3|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Trichomonas vaginalis G3
Length = 679
Score = 95.5 bits (227), Expect = 9e-19
Identities = 44/101 (43%), Positives = 63/101 (62%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+ + PLGAGQ+VGRSCI+L K +MLDCG+H Y + P I P ++ID
Sbjct: 11 LTVMPLGAGQEVGRSCIILKYHRKRVMLDCGIHPAYENFGGLPFIDAIDP-----AKIDV 65
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
++I+HFH+DH A+P+ ++GP +MTH TK I+ LL
Sbjct: 66 LLITHFHIDHITAVPWFLTQTNFSGPCFMTHTTKTISKTLL 106
>UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificity
factor, putative; n=7; Trypanosomatidae|Rep: Cleavage
and polyadenylation specificity factor, putative -
Leishmania major
Length = 756
Score = 91.9 bits (218), Expect = 1e-17
Identities = 40/102 (39%), Positives = 63/102 (61%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 401
++++ P+G+G +VGRSC+++ G+ +MLDCG H + P F I + +ID
Sbjct: 25 EVEVLPIGSGGEVGRSCVVVQYKGRGVMLDCGNHPAKSGLDSLPFFDSIKCD-----EID 79
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V+I+HFHLDHCGALPY + G ++MT TKA +++
Sbjct: 80 VVLITHFHLDHCGALPYFCNQTSFKGRVFMTSATKAFYKMVM 121
>UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity
factor protein, CPSF metallobeta-lactamase; n=2;
Cryptosporidium|Rep: Cleavage and polyadenylation
specifity factor protein, CPSF metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 780
Score = 89.8 bits (213), Expect = 4e-17
Identities = 41/98 (41%), Positives = 60/98 (61%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 410
I LGAG +VGRSC++++ G+++M DCG+H ++ P F I S ID +
Sbjct: 26 IQVLGAGCEVGRSCVVVSFKGRSVMFDCGIHPAFSGIGSLPVFDAID-----VSTIDLCL 80
Query: 411 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
I+HFHLDH GA PY + + G ++MT PTKAI ++
Sbjct: 81 ITHFHLDHSGATPYFVSLTDFNGKVFMTEPTKAICKLV 118
>UniRef50_A5BWZ3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 344
Score = 89.4 bits (212), Expect = 6e-17
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
GAGQ+VG+SC ++T+ GK IM DCGMHMGY D RRFPDFS I + IDC++I+HF
Sbjct: 33 GAGQEVGKSCAVVTINGKRIMFDCGMHMGYLDHRRFPDFSLISKSADFNTAIDCIVITHF 92
>UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2;
Ascomycota|Rep: Endoribonuclease ysh1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 775
Score = 89.4 bits (212), Expect = 6e-17
Identities = 42/96 (43%), Positives = 57/96 (59%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
LGAG +VGRSC ++ GK +MLD G+H Y P F S +D ++ISH
Sbjct: 42 LGAGNEVGRSCHVIQYKGKTVMLDAGVHPAYTGLSALPFFDEFD-----LSTVDVLLISH 96
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
FHLDH +LPY+ + + G ++MTHPTKA+ LL
Sbjct: 97 FHLDHVASLPYVMQKTNFRGRVFMTHPTKAVCKWLL 132
>UniRef50_Q4S6C2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 698
Score = 87.0 bits (206), Expect = 3e-16
Identities = 35/42 (83%), Positives = 42/42 (100%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDE 341
MP+IK+TPLGAGQDVGRSCIL+++GGKNIMLDCGMHMG+ND+
Sbjct: 1 MPEIKVTPLGAGQDVGRSCILVSIGGKNIMLDCGMHMGFNDD 42
Score = 34.7 bits (76), Expect = 1.7
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +2
Query: 356 FLLHCPGRPYNESD*LRYYITFSPRSLRCTALYVRNDWLYRPYLHDTPD*SHSTNPSRG 532
F + P RP + L + F LR +AL+ R+ L RP+LHD P H +P+ G
Sbjct: 75 FFVRDPERPPDGLFGLCDHQPFPSGPLRRSALHERDGGLRRPHLHDPPHQGHLPHPAGG 133
>UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 779
Score = 86.6 bits (205), Expect = 4e-16
Identities = 42/100 (42%), Positives = 57/100 (57%)
Frame = +3
Query: 228 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 407
K LG +VGRSC +L GK +MLD G+H Y P + S++D +
Sbjct: 10 KFFSLGGSNEVGRSCHILQYKGKTVMLDAGIHPAYQGLASLPFYDEFD-----LSKVDIL 64
Query: 408 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+ISHFHLDH +LPY+ + + G ++MTHPTKAI LL
Sbjct: 65 LISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLL 104
>UniRef50_Q8ZYD9 Cluster: MRNA 3'-end processing factor,
conjectural; n=4; Thermoproteaceae|Rep: MRNA 3'-end
processing factor, conjectural - Pyrobaculum aerophilum
Length = 634
Score = 85.0 bits (201), Expect = 1e-15
Identities = 45/101 (44%), Positives = 62/101 (61%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
I +T LGA +VGRS IL++ N++LDCG+ NDE FP I ++D
Sbjct: 174 ITVTFLGAAMEVGRSAILVSTTESNVLLDCGLKPAQNDE-EFPLLDLI-----DIDRLDA 227
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V+++H H+DH G LP++ + GY GP+YMT PTK A ILL
Sbjct: 228 VVLTHAHMDHVGCLPFLFK-YGYKGPVYMTDPTKYQAFILL 267
>UniRef50_UPI00015BA9DD Cluster: beta-lactamase domain protein; n=1;
Ignicoccus hospitalis KIN4/I|Rep: beta-lactamase domain
protein - Ignicoccus hospitalis KIN4/I
Length = 652
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG-YNDERRFPDFSYIVPEGPITSQID 401
++IT LGA ++VGRS ILL ++LD G ++G Y+ ++ FP V E PI ++D
Sbjct: 182 VRITALGAFKEVGRSAILLETKESKVLLDFGANVGSYDPQKHFPK----VEEVPI-DELD 236
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTK 506
VI++H HLDHCG +P++ + GY GP+Y+T PT+
Sbjct: 237 AVIVTHAHLDHCGLVPWLYK-YGYRGPVYVTQPTR 270
>UniRef50_A2D958 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Trichomonas vaginalis G3|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Trichomonas vaginalis G3
Length = 588
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDER-RFPDFSYIVPEGPITSQIDCVIISH 419
GAG +VGRS IL+ +G K ++LDCG++ DE+ R P + P+ +D V+ISH
Sbjct: 19 GAGGEVGRSSILVEIGSKKVLLDCGVNFTATDEKDRLPAYQDPFPK------VDLVLISH 72
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
H DH A+PY++E++ P+YMT ++ + PI+L+
Sbjct: 73 IHTDHLAAVPYLTEVLKCQAPVYMTRASQMMMPIMLD 109
>UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity
factor protein, putative; n=2; Plasmodium vivax|Rep:
Cleavage and polyadenylation specifity factor protein,
putative - Plasmodium vivax
Length = 858
Score = 83.4 bits (197), Expect = 4e-15
Identities = 39/103 (37%), Positives = 60/103 (58%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 395
M +I I LG +VGRSC+++ ++IMLDCG+H + P + + S+
Sbjct: 1 MNNINIVCLGGASEVGRSCVIIESANRSIMLDCGIHPAFMGIGCLPIY-----DAYDISK 55
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
+D +I+HFH+DH GALPY+ + G +YMT TK+I +L
Sbjct: 56 VDLCLITHFHMDHSGALPYLVNRTRFKGKVYMTEATKSICYLL 98
>UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty
factor, subunit, putative; n=4; Piroplasmida|Rep:
Cleavage and polyadenylation specificty factor, subunit,
putative - Theileria annulata
Length = 1282
Score = 83.0 bits (196), Expect = 5e-15
Identities = 39/100 (39%), Positives = 58/100 (58%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
++IT LGAG +VGRSC+ + +M DCG+H + P F E S+++
Sbjct: 5 VRITVLGAGCEVGRSCVYVERDNSCLMFDCGLHPALSGVGALPVF-----EAVDISKVEV 59
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
+++HFHLDHCGA+PY+ + G I MT TK+I +L
Sbjct: 60 CLVTHFHLDHCGAVPYLLSKTKFNGRILMTPATKSICHLL 99
>UniRef50_A1RTJ6 Cluster: Beta-lactamase domain protein; n=1;
Pyrobaculum islandicum DSM 4184|Rep: Beta-lactamase
domain protein - Pyrobaculum islandicum (strain DSM 4184
/ JCM 9189)
Length = 640
Score = 83.0 bits (196), Expect = 5e-15
Identities = 44/101 (43%), Positives = 62/101 (61%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
I +T LGA +VGRS IL++ NI+LDCG+ G DE DF + + ++D
Sbjct: 180 ITVTFLGAAMEVGRSAILVSTTESNILLDCGLKPGQYDE----DFPLL--DAVDIDRLDA 233
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V+++H H+DH G LP++ + GY GP+YMT PTK ILL
Sbjct: 234 VVLTHAHMDHVGCLPFLYK-YGYRGPVYMTDPTKYQTFILL 273
>UniRef50_UPI000049831F Cluster: cleavage and polyadenylation
specificity factor 73 kDa subunit, putative; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: cleavage and
polyadenylation specificity factor 73 kDa subunit,
putative - Entamoeba histolytica HM-1:IMSS
Length = 755
Score = 82.2 bits (194), Expect = 8e-15
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGY-NDERRFPDFSYIVPEGPITSQID 401
++I PLGAG++VGRSC +L G NIMLDCG+H + E P F + I S I+
Sbjct: 21 LEIRPLGAGREVGRSCFILKYMGHNIMLDCGVHPAKPHGEAALPLFEH----ADIDS-IE 75
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAI 512
+ ++H+H+DHC +LPY+ + G + MT PTK I
Sbjct: 76 LLCVTHYHVDHCASLPYLILERQFKGKVLMTPPTKEI 112
>UniRef50_Q4N0H3 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 678
Score = 81.8 bits (193), Expect = 1e-14
Identities = 30/48 (62%), Positives = 43/48 (89%)
Frame = +3
Query: 384 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+T+ +DC +ISHFHLDH GALP+++E IGY+GPIY+T+PT+A+ P+LL
Sbjct: 113 VTNSVDCSVISHFHLDHVGALPFLTEHIGYSGPIYLTYPTRALCPLLL 160
Score = 67.7 bits (158), Expect = 2e-10
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYI 368
M + IT LGAGQDVGRSCI++T K ++ DCG H G+ D+RR+PD +
Sbjct: 1 MSSVDITVLGAGQDVGRSCIVVTFPSKRVIFDCGAHCGFIDQRRYPDLQLL 51
>UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 925
Score = 81.4 bits (192), Expect = 1e-14
Identities = 40/97 (41%), Positives = 55/97 (56%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
LG G +VGRSC ++ GK +MLD GMH + P F S +D ++ISH
Sbjct: 30 LGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKDGFAALPFFDDFD-----LSTVDILLISH 84
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
FHLDH +LPY+ + G ++MTH TKAI L++
Sbjct: 85 FHLDHSASLPYVLSKTNFRGRVFMTHATKAIYKWLIQ 121
>UniRef50_Q97AZ6 Cluster: Cleavage and polyadenylation specificity
factor; n=9; Euryarchaeota|Rep: Cleavage and
polyadenylation specificity factor - Thermoplasma
volcanium
Length = 639
Score = 81.4 bits (192), Expect = 1e-14
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYI-VPEGPITSQID 401
+++T LG +VGRS L++ +++DCGM D + Y+ VPE S ID
Sbjct: 180 VRLTALGGHSEVGRSATLVSTKNSKVLIDCGMMNVGPDADPWDAAPYLYVPEVQPLSSID 239
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
VI++H HLDH G LP + + GY GP+YMT PT+ +A +L
Sbjct: 240 AVILTHAHLDHSGLLPLLFK-YGYDGPVYMTQPTRDLAVLL 279
>UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Ustilago maydis (Smut
fungus)
Length = 880
Score = 81.4 bits (192), Expect = 1e-14
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+ I LGAGQ+VGRSC +L GK I+ D G+H + P + S +D
Sbjct: 24 LTIEMLGAGQEVGRSCCVLKYRGKTIVCDTGVHPAFTGIAALPFIDEL-----DWSTVDA 78
Query: 405 VIISHFHLDHCGALPYMSEMIGYT---GPIYMTHPTKAIAPILL 527
++I+HFHLDH AL Y+ E + G +YMTHPTKA+ L+
Sbjct: 79 ILITHFHLDHAAALTYIMEKTNFRDGHGKVYMTHPTKAVYRFLM 122
>UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15;
Pezizomycotina|Rep: Endoribonuclease ysh1 - Emericella
nidulans (Aspergillus nidulans)
Length = 884
Score = 81.4 bits (192), Expect = 1e-14
Identities = 40/97 (41%), Positives = 54/97 (55%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
LG G +VGRSC ++ GK +MLD GMH P F S +D ++ISH
Sbjct: 29 LGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFD-----LSTVDILLISH 83
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
FH+DH ALPY+ + G ++MTH TKAI L++
Sbjct: 84 FHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQ 120
>UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular
organisms|Rep: Endoribonuclease YSH1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 773
Score = 81.4 bits (192), Expect = 1e-14
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQI 398
P + IT LGAGQ+VGRSC ++ GK I+ D G+H P + S +
Sbjct: 27 PSLTITMLGAGQEVGRSCCVIEHRGKKIVCDAGLHPAQPGIGALPFIDEL-----DWSTV 81
Query: 399 DCVIISHFHLDHCGALPYMSEMIGY---TGPIYMTHPTKAI 512
D ++I+HFH+DH ALPY+ E + G +YMTH TKAI
Sbjct: 82 DAMLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATKAI 122
>UniRef50_Q58633 Cluster: Uncharacterized protein MJ1236; n=16;
Euryarchaeota|Rep: Uncharacterized protein MJ1236 -
Methanococcus jannaschii
Length = 634
Score = 81.4 bits (192), Expect = 1e-14
Identities = 44/120 (36%), Positives = 69/120 (57%)
Frame = +3
Query: 165 ILKRIFS*ASLDVVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDER 344
IL+RI D+V I+++ LG ++VGRSC+ + +++DCG+++ D +
Sbjct: 160 ILRRIGRRIHRDIVVRGDYWIRVSFLGGAREVGRSCLYVQTPDTRVLIDCGINVACED-K 218
Query: 345 RFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
FP F PE I +D VI++H HLDHCG +P + GY GP+Y T PT+ + +L
Sbjct: 219 AFPHFD--APEFSI-EDLDAVIVTHAHLDHCGFIPGLFR-YGYDGPVYCTRPTRDLMTLL 274
>UniRef50_A7AWH8 Cluster: RNA-metabolising metallo-beta-lactamase
and metallo-beta-lactamase superfamily domain containing
protein; n=1; Babesia bovis|Rep: RNA-metabolising
metallo-beta-lactamase and metallo-beta-lactamase
superfamily domain containing protein - Babesia bovis
Length = 760
Score = 81.0 bits (191), Expect = 2e-14
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +3
Query: 384 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
ITS IDC IISHFHLDH GALP+++E +GY GP++MT+PT+ + PI+L
Sbjct: 117 ITSNIDCAIISHFHLDHIGALPFLTEHLGYKGPVFMTYPTRGLGPIML 164
Score = 66.5 bits (155), Expect = 5e-10
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYI 368
M +KIT LGAGQDVGRSC+++T + I+ DCG H G+ D RR+P+ +
Sbjct: 1 MSTVKITMLGAGQDVGRSCVVVTFPSRRILFDCGAHCGFIDHRRYPELQLL 51
>UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificity
factor, 73 kDa subunit; n=7; Plasmodium|Rep: Cleavage
and polyadenylation specificity factor, 73 kDa subunit -
Plasmodium yoelii yoelii
Length = 942
Score = 79.4 bits (187), Expect = 6e-14
Identities = 39/103 (37%), Positives = 59/103 (57%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 395
M +I I LG +VGRSC+++ +IMLDCG+H + P + + S+
Sbjct: 1 MSNINIVCLGGASEVGRSCVIIESEKTSIMLDCGIHPAFMGIGCLPIY-----DAYDISK 55
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
ID +I+HFH+DH GALPY+ + G ++MT TK+I +L
Sbjct: 56 IDVCLITHFHMDHSGALPYLINKTRFKGRVFMTEATKSICYLL 98
>UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2;
Saccharomycetaceae|Rep: Endoribonuclease YSH1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 815
Score = 79.0 bits (186), Expect = 8e-14
Identities = 41/102 (40%), Positives = 58/102 (56%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 401
D K LG +VGRSC ++ K IMLD G+H G P + E + S++D
Sbjct: 13 DFKFFGLGGCNEVGRSCHIIEYKNKVIMLDAGVHPGLQGLSSLPFYD----EYDL-SKVD 67
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+++SHFHLDH +LPY+ + + G ++MTH TKAI LL
Sbjct: 68 ILLVSHFHLDHAASLPYVMQHTNFNGRVFMTHATKAIYRWLL 109
>UniRef50_A1RWY8 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 639
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMH-MGYNDERRFPDFSYIVPEGPITSQID 401
++I LGA +VGRS +L+ NI+LD G+ G DE P F +PE + S +D
Sbjct: 180 VRIVSLGAFHEVGRSAVLVQTPEANILLDAGLKPTGNGDE--LPLFD--LPEFDLES-LD 234
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
V+I+H HLDH GALP + + GY GP+YMT PT ++ +L E
Sbjct: 235 AVVITHAHLDHVGALPVLFK-YGYKGPVYMTEPTLHLSKLLFE 276
>UniRef50_Q72GW5 Cluster: Cleavage and polyadenylation specificity
factor, 100 kDa subunit; n=2; Thermus thermophilus|Rep:
Cleavage and polyadenylation specificity factor, 100 kDa
subunit - Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039)
Length = 431
Score = 77.0 bits (181), Expect = 3e-13
Identities = 39/102 (38%), Positives = 57/102 (55%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
++I P GA ++V S LL GG+ ++LDCGM G + R F + P ++D
Sbjct: 1 MRIVPFGAAREVTGSAHLLLAGGRRVLLDCGMFQGKEEARNHAPFGF----DP--KEVDA 54
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
V+++H HLDH G LP + GY GP+Y T T + I+LE
Sbjct: 55 VLLTHAHLDHVGRLPKLFRE-GYRGPVYATRATALLMEIVLE 95
>UniRef50_Q5ZWR4 Cluster: Metallo-beta lactamase family; n=4;
Legionella pneumophila|Rep: Metallo-beta lactamase
family - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 453
Score = 75.4 bits (177), Expect = 1e-12
Identities = 45/101 (44%), Positives = 62/101 (61%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K+T LGA + V S LLT+G K I++DCG+ GY E R +++ + P P ID
Sbjct: 1 MKLTFLGATETVTGSKYLLTIGSKKILIDCGLFQGYK-ELRLRNWAPL-PIDP--HDIDA 56
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
VII+H H+DH G LP + + G+ G IY T TKA+ ILL
Sbjct: 57 VIITHAHIDHSGYLPLLVKN-GFQGKIYTTPGTKALCSILL 96
>UniRef50_Q8TW11 Cluster: Predicted metal-dependent RNase, consists
of a metallo-beta-lactamase domain and an RNA-binding KH
domain; n=1; Methanopyrus kandleri|Rep: Predicted
metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain - Methanopyrus kandleri
Length = 652
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +3
Query: 228 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 407
+++ LG Q+VGRS + L ++LDCG+++ N +P F+ VPE + +D +
Sbjct: 195 RVSALGGFQEVGRSSLFLHTEESRVLLDCGVNVAANGTDAYPHFN--VPEFRM-DDLDAI 251
Query: 408 IISHFHLDHCGALPYM--SEMIGYTGPIYMTHPTKAIAPILL 527
+I+H HLDHCG LPY ++I P+Y T PT+ + +LL
Sbjct: 252 VITHAHLDHCGFLPYFYRHKVIESRVPVYCTPPTRDLMYLLL 293
>UniRef50_A5K7P0 Cluster: RNA-metabolising metallo-beta-lactamase
domain containing protein; n=1; Plasmodium vivax|Rep:
RNA-metabolising metallo-beta-lactamase domain
containing protein - Plasmodium vivax
Length = 911
Score = 74.1 bits (174), Expect = 2e-12
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +3
Query: 384 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGG 536
I IDCVIISHFH+DH GALP+ +E++ Y G I M++PTKA++PILL G
Sbjct: 106 INEMIDCVIISHFHMDHIGALPFFTEILKYRGTILMSYPTKALSPILLLDG 156
Score = 66.1 bits (154), Expect = 6e-10
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIV 371
I I LGAGQ VGRSC+++ + + +M DCG H+GY DER++P+F+ +V
Sbjct: 9 IVIRVLGAGQTVGRSCVIVELENRRVMFDCGSHLGYKDERKYPNFNLLV 57
>UniRef50_Q18IP5 Cluster: Predicted metal-dependent RNase, consists
of a metallo-beta-lactamase domain and an RNA-binding KH
domain; n=1; Haloquadratum walsbyi DSM 16790|Rep:
Predicted metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain - Haloquadratum walsbyi (strain DSM 16790)
Length = 538
Score = 73.7 bits (173), Expect = 3e-12
Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 395
M D+ +TP G G +VGRSC L G + +DCG+ E +P F E Q
Sbjct: 1 MSDLIVTPRGGGDEVGRSCYHLQAGDYDYFIDCGLKQSETPE--YPLF-----EDVSQGQ 53
Query: 396 IDCVIISHFHLDHCGALPYMSE--MIGYTGPIYMTHPTKAIAPILL 527
ID V I+H H+DH G LP ++ I+MT PT A+A ILL
Sbjct: 54 IDAVFITHAHIDHIGGLPVAEHHGLLDDDASIFMTRPTNALASILL 99
>UniRef50_Q7QRM8 Cluster: GLP_171_24040_22178; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_171_24040_22178 - Giardia lamblia
ATCC 50803
Length = 620
Score = 73.3 bits (172), Expect = 4e-12
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGK-NIMLDCGMHMGYNDERRFPDFSYIVPEG---PIT 389
DI + PLG +G SC L+ +G K + +LDCG+ D R P F + +
Sbjct: 9 DIVVIPLGMSPRIGNSCYLVIVGSKVSFLLDCGLRTSAPDGERVPSFKLKCLQDMGYSLE 68
Query: 390 SQIDCVIISHFHLDHCGALPYMSEMI-GYTGPIYMTHPTKAIAP 518
+D +IISH H DH GALP++ + + P+Y T TK + P
Sbjct: 69 RDLDFIIISHAHFDHSGALPFLFSLFPNFNRPVYTTEATKFLLP 112
>UniRef50_A0RXV0 Cluster: Cleavage and polyadenylation specificity
factor/metal-dependent RNase; n=1; Cenarchaeum
symbiosum|Rep: Cleavage and polyadenylation specificity
factor/metal-dependent RNase - Cenarchaeum symbiosum
Length = 645
Score = 72.9 bits (171), Expect = 5e-12
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG-YNDERRFPDFSYIVPEGPITSQI 398
+I +T LG VGRSC+LL+ +++DCG++ G + +P + G +
Sbjct: 187 EISLTALGGFGQVGRSCMLLSTLDSKVLVDCGVNPGAAHPSESYPRLDW---AGITLDDL 243
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
D V+I H HLDH G LP +++ GY GPIY T PT
Sbjct: 244 DAVVIGHAHLDHTGFLPVLAK-YGYRGPIYCTEPT 277
>UniRef50_Q74MJ3 Cluster: NEQ076; n=1; Nanoarchaeum equitans|Rep:
NEQ076 - Nanoarchaeum equitans
Length = 635
Score = 72.1 bits (169), Expect = 9e-12
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGY--NDERRFPDFSYIVPEGPITSQI 398
++++ LG VGRS +LL I+LD G+ + N++ +P +PE + ++
Sbjct: 189 VRVSFLGGASQVGRSALLLQTKESRILLDFGVDLSLPPNNKNAYPIVE--LPEFDV-KEL 245
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
D V+I+H HLDH G +P++ +M GY GP+Y+T PT IA + L
Sbjct: 246 DAVVITHAHLDHVGFVPFLYKM-GYKGPVYLTPPTLDIATLSL 287
>UniRef50_Q9RZ85 Cluster: Cleavage and polyadenylation specificity
factor-related protein; n=2; Deinococcus|Rep: Cleavage
and polyadenylation specificity factor-related protein -
Deinococcus radiodurans
Length = 499
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/101 (37%), Positives = 61/101 (60%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+++ GA V S LLT+GG+++++DCG+ G ++ R S+ P P + +D
Sbjct: 14 MQMQSFGAACTVTGSMHLLTLGGRHLLVDCGLFQGGDELERRNRESF--PFEP--ASLDA 69
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V+++H HLDH G LP + +GY GP+Y T PT A+A +L
Sbjct: 70 VLLTHAHLDHVGRLPLLVR-LGYRGPVYCTPPTAALAETVL 109
>UniRef50_Q9UXE8 Cluster: MRNA 3'-end polyadenylation factor; n=6;
Thermoprotei|Rep: MRNA 3'-end polyadenylation factor -
Sulfolobus solfataricus
Length = 639
Score = 71.7 bits (168), Expect = 1e-11
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN--DERRFPDFSYIVPEGPITSQI 398
++IT LG +VGRS +L+ ++LD G++ N E+ FP + ++
Sbjct: 183 VRITALGGFLEVGRSAVLVETPESKVLLDVGLNPSANMFGEKLFPKLDI---DQLKMEEL 239
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
D V+I+H HLDHCG +P++ + GY GP+Y T PT+ I ++
Sbjct: 240 DAVVITHAHLDHCGMVPFLFK-YGYEGPVYTTVPTRDIMALM 280
>UniRef50_A5N1D0 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 832
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/105 (38%), Positives = 62/105 (59%)
Frame = +3
Query: 213 IMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 392
+M ++ I+ LG ++VG SCIL+ + +NI++DCG+ + + PDF I +G
Sbjct: 1 MMYNMNISFLGGAREVGGSCILVKIYNRNILMDCGIRQS-SSKDALPDFKSIQEQG---- 55
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
ID +IISH H+DH G+LP +S+ IY T TK + +LL
Sbjct: 56 GIDAIIISHSHMDHIGSLPIISKEYP-LARIYATKMTKDLMRVLL 99
>UniRef50_A3ERC5 Cluster: Putative RNA-processing exonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: Putative
RNA-processing exonuclease - Leptospirillum sp. Group II
UBA
Length = 479
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/95 (41%), Positives = 54/95 (56%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
GA V SC LL + G I++DCG+ G ++ F S + P G S I VI++H
Sbjct: 7 GAASCVTGSCHLLDVDGFRILIDCGLFQG--EDELFS--SNLKPFGFEPSSISAVILTHA 62
Query: 423 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
HLDHCG LP + G+ GP+Y T PT+ + I+L
Sbjct: 63 HLDHCGRLPTLVRQ-GFRGPVYATSPTRYLTEIVL 96
>UniRef50_O77371 Cluster: Cleavage and polyadenylation specificity
factor protein, putative; n=7; Plasmodium|Rep: Cleavage
and polyadenylation specificity factor protein, putative
- Plasmodium falciparum (isolate 3D7)
Length = 1017
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +3
Query: 384 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
I IDCVIISHFH+DH GALP+ +E++ Y G I M++PTKA++PILL
Sbjct: 166 INEIIDCVIISHFHMDHIGALPFFTEILKYRGIILMSYPTKALSPILL 213
Score = 66.1 bits (154), Expect = 6e-10
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGP 383
I I LGAGQ VGRSC+++ + + +M DCG H+GY DER++P+F+ ++ GP
Sbjct: 9 IIIQVLGAGQTVGRSCVIVELENRKVMFDCGCHLGYKDERKYPNFNLLI-RGP 60
>UniRef50_Q9YEQ9 Cluster: Putative exonuclease; n=1; Aeropyrum
pernix|Rep: Putative exonuclease - Aeropyrum pernix
Length = 671
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMH-MGYNDERRFPDFSYIVPEGPITSQID 401
+++ LG+ +VGRS IL+ G ++LD G+ GY + +P Y PE + ++D
Sbjct: 192 VRVVGLGSFGEVGRSAILVDTGESKVLLDAGLSPSGYGPDS-YP--YYWSPEFRV-DELD 247
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V+ISH HLDH G LP + + G+ GP+Y T PT+ I I+L
Sbjct: 248 AVVISHAHLDHVGTLPLLFK-YGFRGPVYATPPTRDIMIIVL 288
>UniRef50_A4CGY6 Cluster: Putative uncharacterized protein; n=4;
Flavobacteriales|Rep: Putative uncharacterized protein -
Robiginitalea biformata HTCC2501
Length = 458
Score = 70.9 bits (166), Expect = 2e-11
Identities = 43/101 (42%), Positives = 59/101 (58%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
I I LGA V S LL G + I++DCG+ G E R ++ Y P +T +ID
Sbjct: 6 INIHFLGAAGTVTGSKYLLDTGDRKILIDCGLFQGLK-ELRLKNWEY--PPVNVT-EIDA 61
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V+++H HLDH G LP + + G+ GPIY T+PT IA I+L
Sbjct: 62 VLLTHGHLDHTGYLPRLVKQ-GFKGPIYGTYPTLDIAKIIL 101
>UniRef50_A6C193 Cluster: Exonuclease of the beta-lactamase fold
involved in RNA processing; n=1; Planctomyces maris DSM
8797|Rep: Exonuclease of the beta-lactamase fold
involved in RNA processing - Planctomyces maris DSM 8797
Length = 464
Score = 69.7 bits (163), Expect = 5e-11
Identities = 37/102 (36%), Positives = 55/102 (53%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+KIT LGA +V S L+ + I+LDCG+ G+ E + + P +D
Sbjct: 1 MKITFLGAAGEVTGSQHLIETDSRRILLDCGLFQGHRQESYLKNSRFAYP----PESLDA 56
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
V +SH H+DHCG LP + G+ GP++ T T IA I+L+
Sbjct: 57 VFLSHGHMDHCGNLPRLFNK-GFRGPVFCTSATADIAEIMLK 97
>UniRef50_Q2LYC2 Cluster: Metallo-beta-lactamase protein; n=6;
Deltaproteobacteria|Rep: Metallo-beta-lactamase protein
- Syntrophus aciditrophicus (strain SB)
Length = 541
Score = 68.9 bits (161), Expect = 8e-11
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND-ERRFPDFSYIVPEGPITSQID 401
+KI LGA + V SC +L G +DCGMH G + E+R + PE +I+
Sbjct: 7 MKIKFLGAARTVTGSCYILETQGHRFAIDCGMHQGNEEIEKRNWNVELYEPE-----KIE 61
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+I+H H+DH G LP + + G+ GPIY T PT + ILL
Sbjct: 62 FFLITHAHIDHTGLLPRLVQK-GFRGPIYATQPTVDLLRILL 102
>UniRef50_Q15V20 Cluster: RNA-metabolising metallo-beta-lactamase;
n=1; Pseudoalteromonas atlantica T6c|Rep:
RNA-metabolising metallo-beta-lactamase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 467
Score = 68.9 bits (161), Expect = 8e-11
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGG-KNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
GA Q+V SC L+ I+LDCGMH G + R D + P P + ID V++SH
Sbjct: 8 GAAQEVTGSCHLIESASFGKILLDCGMHQGGSSIDRIGDEGF--PFNP--ASIDAVLLSH 63
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
HLDH G LP + G+TGPIY T T + ++L+
Sbjct: 64 AHLDHSGMLPKLVH-DGFTGPIYCTSETADLLVVMLQ 99
>UniRef50_Q9HS54 Cluster: MRNA 3'-end processing factor homolog;
n=10; Euryarchaeota|Rep: MRNA 3'-end processing factor
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 641
Score = 68.9 bits (161), Expect = 8e-11
Identities = 36/100 (36%), Positives = 56/100 (56%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+++T LG ++VGR+ +L+ I++DCG G DE + + G T ID
Sbjct: 182 VRVTTLGCCREVGRASFVLSTPETRILVDCGDKPGSEDEVPYLQVQEALAGGANT--IDA 239
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
VI++H HLDH +P + + GY GPIY T PT+ + +L
Sbjct: 240 VILTHAHLDHSAFIPLLFK-YGYDGPIYCTEPTRDLMGLL 278
>UniRef50_Q0HMU8 Cluster: RNA-metabolizing metallo-beta-lactamase;
n=16; Shewanella|Rep: RNA-metabolizing
metallo-beta-lactamase - Shewanella sp. (strain MR-4)
Length = 480
Score = 68.1 bits (159), Expect = 1e-10
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN-DERRFPDFSYIVPEGPITSQIDCVIIS 416
LGA ++V SC LLT+ G+ ++LDCG+ G DE R + P+ I V++S
Sbjct: 8 LGATEEVTGSCHLLTIAGQQMLLDCGLIQGGKADELRNHERFSFDPQA-----ISAVVLS 62
Query: 417 HFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
H H+DH G LP + + GYTGPIY T + I+L+
Sbjct: 63 HAHIDHSGRLPLLVK-AGYTGPIYTHKATAELCAIMLK 99
>UniRef50_A5KKJ4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 534
Score = 67.3 bits (157), Expect = 3e-10
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPI-TSQID 401
+K+T +GA +V SC L GKNI++DCGM G PD Y P PI ++ID
Sbjct: 1 MKLTFVGAAHEVTGSCHFLQAAGKNILIDCGMEQG-------PDL-YENPGLPIPENEID 52
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V ++H H+DH G LP +++ G+ G I+ T T + I+L
Sbjct: 53 YVFLTHAHIDHSGMLPKLAKN-GFKGQIFTTFATADLCNIML 93
>UniRef50_Q7QYP3 Cluster: GLP_393_23867_26140; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_393_23867_26140 - Giardia lamblia
ATCC 50803
Length = 757
Score = 67.3 bits (157), Expect = 3e-10
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 18/114 (15%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMG----GKNIMLDCGMHMGYNDERRFPDFSYI--VPEGPI 386
+K+TPLGAG +VGRSC +L+ +IMLDCG+H ++ R + +
Sbjct: 29 VKLTPLGAGNEVGRSCFILSYQRSGCSGSIMLDCGLHPALSETRDYVAIQALPFFDLEDY 88
Query: 387 TSQIDCVIISHFHLDHCGALPYM------------SEMIGYTGPIYMTHPTKAI 512
S + ++I+HFH DH ALPY+ + Y P+YMT PT I
Sbjct: 89 VSTLSLILITHFHNDHIAALPYLLRCLRDRAVKEGKPELHYIPPVYMTAPTLKI 142
>UniRef50_Q6MLH4 Cluster: Predicted exonuclease of the
beta-lactamase family; n=2; Proteobacteria|Rep:
Predicted exonuclease of the beta-lactamase family -
Bdellovibrio bacteriovorus
Length = 452
Score = 66.5 bits (155), Expect = 5e-10
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND--ERRFPDFSYIVPEGPITSQIDCVII 413
LGA V S L+ I++DCGM G+ + E + DF P P I V++
Sbjct: 6 LGAAGTVTGSKFLVHNNDTRILVDCGMFQGFKELRELNWEDF----PFDP--RDIQAVVL 59
Query: 414 SHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+H HLDHCGALP + + G+ GPIY T PT + I+L
Sbjct: 60 THAHLDHCGALPLLVKK-GFKGPIYCTEPTLELTKIIL 96
>UniRef50_A5ZRP6 Cluster: Putative uncharacterized protein; n=4;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 539
Score = 65.7 bits (153), Expect = 8e-10
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPIT-SQID 401
+KIT +GA +V SC L GK ++DCGM G PD+ Y + P+ S +D
Sbjct: 1 MKITFIGATHEVTGSCYYLEAAGKKFLVDCGMEQG-------PDY-YENQDIPVKGSDLD 52
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V+++H H+DH G LP + G+ GPIY T T + I+L
Sbjct: 53 FVLLTHAHMDHSGNLPAIYAK-GFQGPIYATQATCHLCDIML 93
>UniRef50_Q3ZY44 Cluster: Metallo-beta-lactamase family protein;
n=3; Dehalococcoides|Rep: Metallo-beta-lactamase family
protein - Dehalococcoides sp. (strain CBDB1)
Length = 468
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN-DERRFPDFSYIVPEGPITSQID 401
IKI LGA Q+V S LL +++DCG++ + R + F + PE ++
Sbjct: 3 IKIQFLGAAQNVTGSRYLLQTDHTRLLVDCGLYQERHLQNRNWQPFD-VPPES-----LN 56
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V++SH H+DHCG LP + + GY GP+Y+T T IA I L
Sbjct: 57 AVLVSHAHIDHCGLLPKLVK-DGYNGPVYLTAATAEIARISL 97
>UniRef50_Q4AMZ9 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=2; Chlorobium|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - Chlorobium phaeobacteroides BS1
Length = 462
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
GA + SC +L + G+ I+LDCG+ G +E + P P +ID V++SH
Sbjct: 7 GATSRITGSCHILRIDGRRILLDCGLVQGREEEEALNREPF--PFDP--REIDAVVLSHG 62
Query: 423 HLDHCGALPYMSEMIGYTGPIYMTHP-TKAIAPILLE 530
H+DH G +P + + G+ GP+Y THP T+ +A +LL+
Sbjct: 63 HIDHSGRVPLLVKK-GFDGPVY-THPATRDLALVLLQ 97
>UniRef50_A4VJP5 Cluster: Metallo-beta-lactamase superfamily
protein; n=11; Gammaproteobacteria|Rep:
Metallo-beta-lactamase superfamily protein - Pseudomonas
stutzeri (strain A1501)
Length = 505
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 240 LGAGQDVGRSCILL-TMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIIS 416
LGA Q V SC L+ T G ++L+CGMH G +E ++ +D V++S
Sbjct: 43 LGAIQQVTGSCYLIETHDGARVLLECGMHQGRREEESDNRAAFAFDP----KSLDAVVLS 98
Query: 417 HFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
H H+DH G LP + +GY GP++ T T + ++L
Sbjct: 99 HAHIDHSGLLPRL-VALGYRGPVHCTEATAELLELML 134
>UniRef50_Q2RJ88 Cluster: RNA-metabolising metallo-beta-lactamase;
n=5; Bacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Moorella thermoacetica (strain
ATCC 39073)
Length = 536
Score = 64.1 bits (149), Expect = 2e-09
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN--DERRFPDFSYIVPEGPITSQI 398
IK+ GA V SC LL G +++DCG+ G ER + F P P I
Sbjct: 2 IKLQFCGAAGTVTGSCYLLDTGRYRLLIDCGLFQGSKAIKERNYGPF----PFNP--GAI 55
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
D +I++H H+DHCG +P + + G+ GPI+ T T +A +LL
Sbjct: 56 DALILTHAHIDHCGLIPKL-YLQGFKGPIFTTPVTAELARVLL 97
>UniRef50_A4XI93 Cluster: Beta-lactamase domain protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Beta-lactamase domain protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 821
Score = 64.1 bits (149), Expect = 2e-09
Identities = 37/101 (36%), Positives = 55/101 (54%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
++I LG ++VG SC+L+ GGKNI+LD G+ M E + P+ + G D
Sbjct: 1 MEIVFLGGAKEVGASCVLIKAGGKNILLDSGIRM---KEDKLPNLQLLRELG----GADV 53
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+ISH HLDH G+LP ++ + Y PTK + +LL
Sbjct: 54 CLISHAHLDHIGSLPLIAREYPHIF-FYTNQPTKDLIKVLL 93
>UniRef50_Q73MR4 Cluster: Metallo-beta-lactamase family protein;
n=1; Treponema denticola|Rep: Metallo-beta-lactamase
family protein - Treponema denticola
Length = 470
Score = 63.7 bits (148), Expect = 3e-09
Identities = 35/101 (34%), Positives = 55/101 (54%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
IK LGA ++V S +L + G ++DCG G E + + VP +++
Sbjct: 3 IKFYSLGAAEEVTGSKHILEVDGHKYLIDCGAFQGKRAEADKKNRDFNVP----APELEA 58
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
VI++H H DHCG LP + + G+TG IY T T+ IA +++
Sbjct: 59 VILTHGHYDHCGLLPLLGKH-GFTGNIYATPATRDIANLVM 98
>UniRef50_Q0LL72 Cluster: Beta-lactamase-like; n=3; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-lactamase-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 786
Score = 63.7 bits (148), Expect = 3e-09
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN-DERRFPDFSYIVPEGPITSQID 401
I P G Q+VG SC +L +G ++I++D GM + R PD + +G +D
Sbjct: 2 ISFHPFGGAQEVGASCGILKLGMRHILVDAGMRPAARPGQSRTPDLEAL--KG---FPLD 56
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
++I+H H+DH G LP ++ + T PIY T T A+ ILL
Sbjct: 57 AILITHAHIDHTGCLPLVASLFP-TVPIYATESTIALMRILL 97
>UniRef50_A6VTF2 Cluster: RNA-metabolising metallo-beta-lactamase;
n=14; Proteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Marinomonas sp. MWYL1
Length = 477
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 GAGQDVGRSCI-LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
GA Q V SC L +++++DCG+ G D + + + I S + ++I+H
Sbjct: 8 GAVQGVTGSCHELFVDSDQSVLVDCGLFQGAETSGSGADSNSLEIDFDI-SAVQALVITH 66
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
H+DH G LPY+ G+TGPIY + P+ A+ P+++E
Sbjct: 67 VHIDHVGRLPYLL-AAGFTGPIYCSKPSAALLPLVIE 102
>UniRef50_A7DQ83 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Beta-lactamase domain protein - Candidatus
Nitrosopumilus maritimus SCM1
Length = 646
Score = 63.7 bits (148), Expect = 3e-09
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDER-RFPDFSYIVPEGPITSQI 398
++ + LG VGRS +LL+ I++DCG++ G FP + +
Sbjct: 188 EVSLYTLGGFGQVGRSSLLLSTPESKILIDCGINPGARSPMDAFPRLDSL---NLTLDDL 244
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
D V+I H HLDH G LP + + GY GPIY T PT
Sbjct: 245 DAVVIGHAHLDHTGFLPTLCK-YGYKGPIYCTEPT 278
>UniRef50_UPI00004992E1 Cluster: cleavage and polyadenylation
specificity factor subunit, putative; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: cleavage and polyadenylation
specificity factor subunit, putative - Entamoeba
histolytica HM-1:IMSS
Length = 452
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE-GPITSQID 401
+K+ G G+ VG SC+++ I+ DCG YN R PD I+S+I
Sbjct: 1 MKVHVFGGGKSVGSSCVVVEGKEDAILFDCG----YNPVR--PDVGIDFSRMNAISSKIR 54
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+ I+HFH+DH G LP++++ + PIY++ PT+A+ +++
Sbjct: 55 AICITHFHVDHVGMLPWLTKFMDV--PIYLSEPTQALLSLII 94
>UniRef50_Q896M4 Cluster: Cleavage and polyadenylation specificity
factor; n=3; Clostridiaceae|Rep: Cleavage and
polyadenylation specificity factor - Clostridium tetani
Length = 506
Score = 62.5 bits (145), Expect = 7e-09
Identities = 35/101 (34%), Positives = 57/101 (56%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+KI GA V SC L+ + K I+LDCG++ G +++ R + P+ +ID
Sbjct: 1 MKIEFFGAASCVTGSCHLVKIKDKKILLDCGLYQGKDEKERGNETFNFNPK-----EIDY 55
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
VI+SH H+DH G +P + + G+ G + T TK ++ I+L
Sbjct: 56 VILSHAHIDHSGRIPLLYKK-GFKGRVICTEGTKDLSSIML 95
>UniRef50_Q1PVS7 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 468
Score = 62.5 bits (145), Expect = 7e-09
Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
I++ +GA + V S L+ +++LDCG+ G+ E + ++ + +G Q+D
Sbjct: 2 IELEFIGAAKTVTGSKHLIRTSRASVLLDCGLFQGHRKEADEKNRNFSI-DG---KQLDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAI-APILLE 530
+++SH H+DH GALP + + GY GPIY T T+ + +P+L++
Sbjct: 58 IVLSHAHIDHSGALPCIFKN-GYRGPIYATPATRDLCSPMLMD 99
>UniRef50_UPI00015BD54C Cluster: UPI00015BD54C related cluster; n=1;
unknown|Rep: UPI00015BD54C UniRef100 entry - unknown
Length = 451
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/101 (30%), Positives = 56/101 (55%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K+ GA + V S +L + + I++DCG+ G DE + + + E +D
Sbjct: 1 MKVISYGAAKTVTGSAHMLILDDEKILIDCGLFQGV-DEEKSEELGFDPKE------VDA 53
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V+++H H+DHCG +P + + G+ G IY T PT ++ ++L
Sbjct: 54 VLLTHAHIDHCGRIPMLIKN-GFKGKIYCTRPTYELSRLML 93
>UniRef50_Q8RBU2 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=4;
Clostridia|Rep: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing -
Thermoanaerobacter tengcongensis
Length = 541
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG--YNDERRFPDFSYIVPEGPITSQI 398
+KIT LGA ++V SC L+ ++DCGM G DE + +F + + + I
Sbjct: 1 MKITFLGAAKEVTGSCYLVETENARFLVDCGMFQGGEVEDELNYQEFIFDIKD------I 54
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
D V+++H H+DH G +P + + GY IY TH T + +L
Sbjct: 55 DFVLLTHAHIDHSGRIPVLYKR-GYRKRIYATHATVDLCRYML 96
>UniRef50_Q8KET4 Cluster: Metallo-beta-lactamase superfamily
protein; n=9; Bacteria|Rep: Metallo-beta-lactamase
superfamily protein - Chlorobium tepidum
Length = 469
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/95 (37%), Positives = 50/95 (52%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
GA + V SC +L G ++LDCG+ G + + P P S+ID V++SH
Sbjct: 7 GATRRVTGSCHILRAAGYTVLLDCGLVQGSREVEALNREPF--PFEP--SEIDAVVLSHG 62
Query: 423 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
H+DH G LP + G+ GPIY H T + ILL
Sbjct: 63 HIDHSGRLPLLVNR-GFRGPIYTHHGTIELCEILL 96
>UniRef50_Q11BH9 Cluster: Beta-lactamase-like; n=6;
Proteobacteria|Rep: Beta-lactamase-like - Mesorhizobium
sp. (strain BNC1)
Length = 452
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/102 (36%), Positives = 57/102 (55%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+ +T LG V S LLT G + I++DCG+ G + R ++ + P P S ID
Sbjct: 2 LTLTSLGGAGTVTGSKHLLTNGDRRILIDCGLFQGLKNLREL-NWEPL-PVAP--SSIDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
V+++H HLDH G LP + G+ G IY T T+ +A ++L+
Sbjct: 58 VVLTHAHLDHSGYLPKLVR-DGFKGRIYATAATRDVAELILK 98
>UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 784
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/101 (36%), Positives = 49/101 (48%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
IK T L +D C LL + I+LDCG+ YN DFS + P + +ID
Sbjct: 5 IKFTALSGAKDESPPCYLLEIDDFCILLDCGL--SYN-----LDFSLLEPLEKVAKKIDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V++SH H G LPY+ G TG IY T P + + L
Sbjct: 58 VLLSHSDTTHIGGLPYVVGKYGLTGTIYGTTPVLKMGTMFL 98
>UniRef50_Q3AAG6 Cluster: Metallo-beta-lactamase family protein;
n=2; Carboxydothermus hydrogenoformans|Rep:
Metallo-beta-lactamase family protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 504
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN--DERRFPDFSYIVPEGPITSQI 398
+++T GA V SC L + G ++DCG+ G ER + +F P P +I
Sbjct: 1 MELTFFGAADTVTGSCYLFNVAGHKFLVDCGLFQGPKAIKERNYGEF----PFNP--REI 54
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+ ++++H H+DH G +P + + G+ G IY T PT +A ++L
Sbjct: 55 EFILLTHAHIDHSGLIPKLVKK-GFKGTIYATEPTVDLAAVML 96
>UniRef50_A3I563 Cluster: Zn-dependent hydrolase, beta-lactamase
superfamily protein; n=1; Bacillus sp. B14905|Rep:
Zn-dependent hydrolase, beta-lactamase superfamily
protein - Bacillus sp. B14905
Length = 356
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/92 (39%), Positives = 50/92 (54%)
Frame = +3
Query: 228 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 407
KI LG + GR+C + GK I+LDCG+ N ++ P + E ++ V
Sbjct: 3 KIEILGGVGEYGRNCFYIENQGKAILLDCGVMK--NSQKTPPAITLNHVE-----KLKAV 55
Query: 408 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
ISH H+DH GALP + EM GY G + M+H T
Sbjct: 56 FISHSHIDHVGALPLLEEM-GYKGQVLMSHKT 86
>UniRef50_A0JWK6 Cluster: Beta-lactamase domain protein; n=2;
Bacteria|Rep: Beta-lactamase domain protein -
Arthrobacter sp. (strain FB24)
Length = 461
Score = 60.9 bits (141), Expect = 2e-08
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGY---NDERRFPDFSYIVPEGPITSQIDCVI 410
LGA V S L+ GK I++DCG+ GY D R P P P ID ++
Sbjct: 12 LGATDSVTGSRYLVEAAGKRILVDCGLFQGYKVLRDRNRIP-----FPVRP--DSIDAIL 64
Query: 411 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
++H HLDH G +P + G+ GP+Y T T + +LL
Sbjct: 65 LTHAHLDHTGYVPALVR-DGFNGPVYATEGTTELCTLLL 102
>UniRef50_UPI00015BB212 Cluster: beta-lactamase domain protein; n=1;
Ignicoccus hospitalis KIN4/I|Rep: beta-lactamase domain
protein - Ignicoccus hospitalis KIN4/I
Length = 428
Score = 60.5 bits (140), Expect = 3e-08
Identities = 36/100 (36%), Positives = 54/100 (54%)
Frame = +3
Query: 228 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 407
+IT LG ++VGR+ + G +++LD G+ D FP+ Y+ P+ + V
Sbjct: 4 EITFLGGAREVGRAAYWVKDGKASLLLDYGVSFDEEDRPVFPE--YVSPK-----DVGAV 56
Query: 408 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
++SH HLDH GALP + I P YMT TK + IL+
Sbjct: 57 VLSHAHLDHSGALPMLYSAI--RRPAYMTKLTKELTAILI 94
>UniRef50_A0Q181 Cluster: Metallo-beta-lactamase family protein,
putative; n=5; Clostridium|Rep: Metallo-beta-lactamase
family protein, putative - Clostridium novyi (strain NT)
Length = 512
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/101 (34%), Positives = 55/101 (54%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K+ GA + V SC ++ K I+LDCG+ G +++ R D P P +ID
Sbjct: 1 MKLEFYGAAKCVTGSCHIMKFNDKTILLDCGLFQGKDEKVRGND---EFPFDP--KKIDY 55
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
VI+SH H+DH G +P + + G+ G + T TK + I+L
Sbjct: 56 VILSHAHIDHSGRIPLLYKK-GFKGEVICTRATKQLCSIML 95
>UniRef50_A1RXC5 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 428
Score = 60.5 bits (140), Expect = 3e-08
Identities = 40/106 (37%), Positives = 60/106 (56%)
Frame = +3
Query: 213 IMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 392
IM D+ + LGA ++VGRS ILL + GK I+LD G+ + +E +FP + P+G
Sbjct: 4 IMADVYLKALGAAREVGRSAILLGVEGKLILLDYGVSI-EGEEPQFP--LPVPPKG---- 56
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
I V ISH HLDH GA P + + P+ T T ++ +L++
Sbjct: 57 -IHAVAISHAHLDHSGAAPLL--YVSGQPPLISTPLTATLSDLLIK 99
>UniRef50_A4J2E1 Cluster: Beta-lactamase domain protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Beta-lactamase
domain protein - Desulfotomaculum reducens MI-1
Length = 525
Score = 60.1 bits (139), Expect = 4e-08
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND--ERRFPDFSYIVPEGPITSQIDCVII 413
LGA Q V SC L+ G +++DCG+ G + ER + +F P P S +D +++
Sbjct: 6 LGAAQTVTGSCFLVEAGATRLLVDCGLFQGSKEIKERNYRNF----PLAP--SSVDFILL 59
Query: 414 SHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+H H+DH G LP + G+ G + T T + ILL
Sbjct: 60 THAHIDHSGLLPKFIKQ-GFKGKVIATSATVDLCEILL 96
>UniRef50_A3HWA3 Cluster: Metallo-beta-lactamase family protein;
n=1; Algoriphagus sp. PR1|Rep: Metallo-beta-lactamase
family protein - Algoriphagus sp. PR1
Length = 482
Score = 60.1 bits (139), Expect = 4e-08
Identities = 33/102 (32%), Positives = 55/102 (53%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 401
D+ + LG V S L+ +G ++DCG++ G + R+ + +P + ++
Sbjct: 18 DVTVKFLGGAGAVTGSKYLIDLGDFEFLVDCGLYQGAKNLRKRNWDKFPMPP----TDME 73
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+I++H HLDH G LP + + G+ GPIY T T +A ILL
Sbjct: 74 AIILTHAHLDHVGYLPKLVKQ-GFKGPIYCTEATAELAKILL 114
>UniRef50_Q1NVJ9 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=2; Deltaproteobacteria|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - delta proteobacterium MLMS-1
Length = 469
Score = 59.7 bits (138), Expect = 5e-08
Identities = 36/101 (35%), Positives = 53/101 (52%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K+T GA V S LL + GK I+LDCG+ G E F ++DC
Sbjct: 1 MKLTFHGAAGTVTGSQHLLEVNGKRILLDCGLFQGKRKEA----FELNRQGFCNGKKLDC 56
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+I+SH H+DH G +P + + G+ G IY T T+ + I+L
Sbjct: 57 LILSHAHIDHSGNIPCLVKS-GFDGDIYTTQATRDLCAIML 96
>UniRef50_Q9YFR8 Cluster: Putative exonuclease; n=1; Aeropyrum
pernix|Rep: Putative exonuclease - Aeropyrum pernix
Length = 420
Score = 59.7 bits (138), Expect = 5e-08
Identities = 33/100 (33%), Positives = 57/100 (57%)
Frame = +3
Query: 228 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 407
+I LG+G++VGR+ IL+ GG+ ++LD G++ ND FP + P +D +
Sbjct: 3 RIRILGSGREVGRAAILVESGGRGLLLDYGVNFDENDRPVFP--GDVRPR-----DLDGL 55
Query: 408 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+++H HLDH GA PY+ + ++ T T ++ +LL
Sbjct: 56 VLTHSHLDHIGAAPYL--YVSQGPKVFGTRVTLHVSRLLL 93
>UniRef50_A6E886 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Pedobacter sp. BAL39|Rep:
Metallo-beta-lactamase superfamily protein - Pedobacter
sp. BAL39
Length = 460
Score = 58.8 bits (136), Expect = 9e-08
Identities = 37/101 (36%), Positives = 55/101 (54%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K+T GA + V S LL + NI++DCG+ Y E + Y P P + +D
Sbjct: 1 MKLTIWGAARQVTGSMHLLQLKDYNILIDCGLD--YEKETYQEENQYF-PFDP--ADLDV 55
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
VI++H H+DH G LP + M G+ G I T PT ++ +LL
Sbjct: 56 VILTHAHIDHSGNLPTLVRM-GFQGQILCTPPTADLSELLL 95
>UniRef50_O87142 Cluster: WbfZ protein; n=32; Vibrionaceae|Rep: WbfZ
protein - Vibrio cholerae
Length = 446
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/112 (27%), Positives = 56/112 (50%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 401
++++ G V SC L G+ +++DCG+ G ++ +F+ +D
Sbjct: 8 NMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFAL--------GHVD 59
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGGPGTQFAL 557
+I++H H+DH G LP++ G+ PIY T T + P++LE G Q +
Sbjct: 60 ALILTHAHIDHIGRLPWLL-AAGFKQPIYCTAATAELVPLMLEDGLKLQLGM 110
>UniRef50_A1S0I1 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 441
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDER-RFPDFSYIVPEGPITSQID 401
+++ LG ++ GRSC+ L GG+ + D G+ Y+ + P F ++ G +++
Sbjct: 1 MRLVFLGGYREQGRSCLALEHGGRYYVFDVGVKKVYSGGKYGEPPFLGLIDAG----KVE 56
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
V +SH H DH A+P + G+ GPIYM+ PT
Sbjct: 57 AVFVSHLHEDHLAAVPALVRR-GFNGPIYMSAPT 89
>UniRef50_Q8DE34 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=6;
Vibrionales|Rep: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing - Vibrio
vulnificus
Length = 446
Score = 57.6 bits (133), Expect = 2e-07
Identities = 32/105 (30%), Positives = 52/105 (49%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
G V SC G +++DCG+ G + R P+ + V ID ++++H
Sbjct: 7 GGKDTVTGSCHEFRAAGIALLIDCGLFQG--KDARPPEVDFPV------KHIDALVLTHA 58
Query: 423 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGGPGTQFAL 557
H+DH G +P++ G++G IY T T + P++LE G Q L
Sbjct: 59 HIDHIGRIPWLL-AAGFSGSIYCTEATAELVPLMLEDGLRLQLGL 102
>UniRef50_Q6N2A1 Cluster: Beta-lactamase-like; n=12;
Rhizobiales|Rep: Beta-lactamase-like - Rhodopseudomonas
palustris
Length = 542
Score = 57.6 bits (133), Expect = 2e-07
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSY-IVPEGPITSQIDCVIISH 419
GA + V SC L GK ++DCG+ G+ + + +Y P P S+ID V+++H
Sbjct: 9 GAARTVTGSCYLFETKGKRFLVDCGLFQGH---KTLKELNYGAFPFRP--SEIDAVLLTH 63
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGGPGTQFA 554
H+DHCG LP + G+ G I T T + +L Q A
Sbjct: 64 AHIDHCGLLPKLVRE-GFKGRILATRGTIDLCSYMLPDAGSIQEA 107
>UniRef50_Q5WCW7 Cluster: Beta-lactamase superfamily Zn-dependent
hydrolase; n=1; Bacillus clausii KSM-K16|Rep:
Beta-lactamase superfamily Zn-dependent hydrolase -
Bacillus clausii (strain KSM-K16)
Length = 367
Score = 57.6 bits (133), Expect = 2e-07
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKN--IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQI 398
+K+T LG + GR+C LL N I+LDCG+ G ++ FP + + S I
Sbjct: 2 VKVTALGGVGEYGRNCFLLKEEATNQTILLDCGVKNGKPEQ--FPAITE-----QLASTI 54
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKA-IAPI 521
D V +SH H DH GALP ++ G+T I+++ + A I PI
Sbjct: 55 DVVFLSHVHNDHVGALPLLAAK-GFTKEIWLSEASLAQIEPI 95
>UniRef50_Q023M0 Cluster: Beta-lactamase domain protein; n=1;
Solibacter usitatus Ellin6076|Rep: Beta-lactamase domain
protein - Solibacter usitatus (strain Ellin6076)
Length = 469
Score = 57.6 bits (133), Expect = 2e-07
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPIT-SQID 401
+K+T GA V S L+ GGK +LDCG+ G E + + P + S ID
Sbjct: 1 MKLTFWGAAGTVTGSMHLVETGGKRYLLDCGLAQGRRKEADAKNRNL-----PFSGSSID 55
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMT 494
V++SH H+DH G LP + + G++GPIY T
Sbjct: 56 AVVLSHAHIDHSGNLPSLVKH-GFSGPIYST 85
>UniRef50_Q9AA00 Cluster: Metallo-beta-lactamase family protein;
n=2; Caulobacter|Rep: Metallo-beta-lactamase family
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 530
Score = 57.2 bits (132), Expect = 3e-07
Identities = 34/108 (31%), Positives = 52/108 (48%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
I +T GA V C L +++DCGM G + +Y P Q+D
Sbjct: 3 ISLTFHGAAGCVTGFCARLVTPRTTVLIDCGMFQG---SKTLKALNY-QPFPFDAGQVDA 58
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGGPGTQ 548
V+++H H+DH G LP + + G+ GPIY T T+ + ++L G Q
Sbjct: 59 VLLTHAHIDHSGLLPKLM-LAGFEGPIYATAATRDLGAVMLVDAGGIQ 105
>UniRef50_Q2G7Y1 Cluster: Beta-lactamase-like protein; n=1;
Novosphingobium aromaticivorans DSM 12444|Rep:
Beta-lactamase-like protein - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 535
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/101 (31%), Positives = 53/101 (52%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+++ GA + V SC +G +++DCG+ G R ++ P +ID
Sbjct: 3 LRLNVHGAARTVTGSCFEFVLGDMRLLVDCGLFQG---SRSLEALNH-EPLDFDVHKIDG 58
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
VI++H H+DH G LP ++ GY GPI+ T T A+ ++L
Sbjct: 59 VIVTHAHIDHSGLLPRLAAE-GYEGPIWCTPETAALLKVML 98
>UniRef50_Q9LKF9 Cluster: Cleavage and polyadenylation specificity
factor subunit 2; n=8; Magnoliophyta|Rep: Cleavage and
polyadenylation specificity factor subunit 2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 739
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/92 (33%), Positives = 49/92 (53%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+++TPL + L+++ G N ++DCG +ND D S + P + S ID
Sbjct: 5 VQVTPLCGVYNENPLSYLVSIDGFNFLIDCG----WND---LFDTSLLEPLSRVASTIDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHP 500
V++SH H GALPY + +G + P+Y T P
Sbjct: 58 VLLSHPDTLHIGALPYAMKQLGLSAPVYATEP 89
>UniRef50_A6Q9T8 Cluster: RNA-metabolising metallo-beta-lactamase;
n=2; Sulfurovum sp. NBC37-1|Rep: RNA-metabolising
metallo-beta-lactamase - Sulfurovum sp. (strain NBC37-1)
Length = 467
Score = 56.8 bits (131), Expect = 4e-07
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTM-GGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 407
+ GA + V SC LL + G I++DCGM G + R + F + +D +
Sbjct: 4 VVSYGAAEVVTGSCHLLEIDSGTRILVDCGMFQGREEHRNYGLFDFDA------KSVDYL 57
Query: 408 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+++H HLDH G +P + + G++G I T T A+A ++L
Sbjct: 58 LVTHAHLDHVGRIPKLVKE-GFSGTIVATDATFALAEVVL 96
>UniRef50_A7QCN8 Cluster: Chromosome chr12 scaffold_78, whole genome
shotgun sequence; n=12; Eukaryota|Rep: Chromosome chr12
scaffold_78, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 662
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +3
Query: 390 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
S ID ++++HFHLDH +LPY E + G ++MTH TKAI +LL
Sbjct: 42 STIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL 87
>UniRef50_Q5QU60 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=2; Alteromonadales|Rep: Predicted
exonuclease of the beta-lactamase fold - Idiomarina
loihiensis
Length = 452
Score = 56.4 bits (130), Expect = 5e-07
Identities = 32/100 (32%), Positives = 55/100 (55%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+++ LG + V S L+ I++DCG+ GY RR ++ + P G +Q+D
Sbjct: 1 MRVVFLGGAETVTGSKYLVETESTRILIDCGLFQGYKWLRR-RNWQPL-PMG--INQVDG 56
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
V+++H HLDH G +P + + G+ GP++ H T + IL
Sbjct: 57 VVLTHAHLDHSGFVPVLYKE-GFRGPVFAHHATSGLCDIL 95
>UniRef50_A7HPZ1 Cluster: Beta-lactamase domain protein; n=2;
Alphaproteobacteria|Rep: Beta-lactamase domain protein -
Parvibaculum lavamentivorans DS-1
Length = 472
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/100 (33%), Positives = 52/100 (52%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 410
+T LG V S LLT+ G I++DCG+ G + R + P P ID ++
Sbjct: 24 LTSLGGAGTVTGSKHLLTLDGHRILIDCGLFQGLKNLRELNWAPF--PVDP--RSIDAIV 79
Query: 411 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
++H HLDH G LP + G+ G ++ T T +A ++L+
Sbjct: 80 LTHAHLDHSGYLPKIVRE-GFRGRVFATDTTCNVAALILK 118
>UniRef50_A5BWD3 Cluster: Putative uncharacterized protein; n=3;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 986
Score = 56.0 bits (129), Expect = 6e-07
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
G G ++GRSC+ + GK I+ DCG+ GY P F I P S ID +++ F
Sbjct: 527 GIGNEMGRSCVYTSYKGKTILFDCGVLPGYTGTVALPYFDEIDP-----STIDVLLVIPF 581
Query: 423 HLDHCGALP-YMSEMI 467
LDH +LP Y+ E I
Sbjct: 582 QLDHAASLPSYLGEDI 597
>UniRef50_A7DPN0 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Beta-lactamase domain protein - Candidatus
Nitrosopumilus maritimus SCM1
Length = 421
Score = 56.0 bits (129), Expect = 6e-07
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+ + LGA +VGRS L+ G N++LD G+ G RR Y + P +D
Sbjct: 1 MNVKVLGAANEVGRSGFLVNCNGTNLLLDYGVLFG----RRGTPPQYPLHVKP--KDLDA 54
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+II+H HLDH G +P S + +Y T PT ++ +L+E
Sbjct: 55 IIITHAHLDHSGNVP--SLFVSGNTDVYATPPTFDLSKLLIE 94
>UniRef50_Q60355 Cluster: Uncharacterized protein MJ0047; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0047 -
Methanococcus jannaschii
Length = 428
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/96 (35%), Positives = 49/96 (51%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
GA +VGRSCI + I+LDCG+ +G + Y + + I +D V ISH
Sbjct: 7 GAALEVGRSCIEIKTDKSKILLDCGVKLG-------KEIEYPILDNSI-RDVDKVFISHA 58
Query: 423 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
HLDH GALP + P+ T +K + +LL+
Sbjct: 59 HLDHSGALPVLFHR-KMDVPVITTELSKKLIKVLLK 93
>UniRef50_Q7UMQ3 Cluster: Cleavage and polyadenylation specifity
factor-related protein; n=1; Pirellula sp.|Rep: Cleavage
and polyadenylation specifity factor-related protein -
Rhodopirellula baltica
Length = 488
Score = 54.8 bits (126), Expect = 1e-06
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = +3
Query: 201 VVKLIMPDIKITPLGAGQDVGRSCILLTMG-GKNIMLDCGMHMGYNDERRFPDFSYIVPE 377
+V L+M +K+ GA + V SC L + +++++DCG G D R+ P+ PE
Sbjct: 37 LVLLLMSLMKLVHHGAHEGVTGSCHQLWIDDSQSLLVDCGTFQG-EDARKKPN-----PE 90
Query: 378 GPITSQ-IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+ + I ++++H H+DH G +PY+ G+ PI + PT + P+++E
Sbjct: 91 IEFSLRGIQALLLTHVHIDHAGRIPYLL-AAGFDHPILCSAPTAKLLPLVME 141
>UniRef50_Q12E81 Cluster: Beta-lactamase-like; n=14;
Proteobacteria|Rep: Beta-lactamase-like - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 453
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/96 (34%), Positives = 52/96 (54%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
LGA V S L+ +++DCG+ GY + R ++S + P P + ID V+++H
Sbjct: 6 LGATDTVTGSKYLVQHDKARVLVDCGLFQGYK-QLRLRNWSPL-PVKP--AAIDAVVLTH 61
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
H+DH G LP ++ G+ G +Y T T + ILL
Sbjct: 62 AHIDHSGYLPLLARQ-GFRGKVYCTPATADLCRILL 96
>UniRef50_A7CRQ7 Cluster: Beta-lactamase domain protein; n=1;
Opitutaceae bacterium TAV2|Rep: Beta-lactamase domain
protein - Opitutaceae bacterium TAV2
Length = 452
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K+T L +G +C LL +G N+++D G+H + PDF+ + +ID
Sbjct: 1 MKLTDLNRQGGIGANCTLLQIGDINLVIDSGLHPKIAGRQAVPDFAKL-----RNLEIDL 55
Query: 405 VIISHFHLDHCGALPYM 455
++++H HLDH G+LP +
Sbjct: 56 ILVTHCHLDHIGSLPVL 72
>UniRef50_A1SFD7 Cluster: Beta-lactamase domain protein; n=2;
Bacteria|Rep: Beta-lactamase domain protein -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 460
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/99 (33%), Positives = 51/99 (51%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 410
+T LGA + V S L+ ++D G++ G D RR + VP S + V+
Sbjct: 6 LTFLGAAESVTGSKFLVDTHSSRTLVDAGLYQGLADLRRRNWTPFPVP----ASGLGSVV 61
Query: 411 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
++H HLDHCG LP + + G+ GPI + T + I+L
Sbjct: 62 VTHAHLDHCGFLPRLVKE-GFDGPILCSPDTAELVEIVL 99
>UniRef50_A0RY50 Cluster: Exonuclease of the beta-lactamase fold;
n=1; Cenarchaeum symbiosum|Rep: Exonuclease of the
beta-lactamase fold - Cenarchaeum symbiosum
Length = 417
Score = 54.8 bits (126), Expect = 1e-06
Identities = 37/97 (38%), Positives = 50/97 (51%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
LGA +VGRS L+ G N++LD G+ G RR Y V P +D +II+H
Sbjct: 2 LGAAGEVGRSGFLVGCNGTNLLLDYGIMFG----RRGDPPKYPVHVKP--RDVDSIIITH 55
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
HLDH G +P M I Y T PT ++ +L+E
Sbjct: 56 AHLDHSGNVPSM--YISGNVDTYATAPTLELSKLLIE 90
>UniRef50_O17403 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 2; n=2; Caenorhabditis|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 2 - Caenorhabditis elegans
Length = 843
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/92 (35%), Positives = 42/92 (45%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
IK+ +D G C LL + G I+LDCG + RF Y P +I
Sbjct: 5 IKLKVFSGAKDEGPLCYLLQVDGDYILLDCGW------DERF-GLQYFEELKPFIPKISA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHP 500
V+ISH H G LPY+ G T P+Y T P
Sbjct: 58 VLISHPDPLHLGGLPYLVSKCGLTAPVYATVP 89
>UniRef50_A3WMD7 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=1; Idiomarina baltica OS145|Rep:
Predicted exonuclease of the beta-lactamase fold -
Idiomarina baltica OS145
Length = 460
Score = 54.4 bits (125), Expect = 2e-06
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKN-IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 401
I +T LG V SC L + + +M+DCG G E + P + S +
Sbjct: 10 IHLTHLGGTWQVTGSCHLWHLNAQQTVMIDCGAFQGITQE------DDLTPYVDVDS-LA 62
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V I+H HLDH G LP + +GY GPIY T T A+ ++L
Sbjct: 63 AVFITHAHLDHVGRLPQLL-ALGYRGPIYCTAATLALMQLVL 103
>UniRef50_A0JUX7 Cluster: Beta-lactamase domain protein; n=25;
Bacteria|Rep: Beta-lactamase domain protein -
Arthrobacter sp. (strain FB24)
Length = 563
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +3
Query: 207 KLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERR----FPDFSYIVP 374
KL+ ++I PLG ++GR+ + + GK +++DCG+ + PDFSYI
Sbjct: 14 KLLKDTLRIVPLGGLGEIGRNMTVFEIDGKLLIVDCGVLFPEETQPGVDLILPDFSYIEK 73
Query: 375 EGPITSQIDCVIISHFHLDHCGALPYM 455
I V+++H H DH GA+PY+
Sbjct: 74 R---LDDIVAVVLTHGHEDHIGAVPYL 97
>UniRef50_Q8RAH0 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=9; Bacteria|Rep:
Predicted hydrolase of the metallo-beta-lactamase
superfamily - Thermoanaerobacter tengcongensis
Length = 554
Score = 52.8 bits (121), Expect = 6e-06
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 392
+KI PLG ++G++ + G I++DCG+ ++ + PD +Y++
Sbjct: 7 LKIIPLGGLNEIGKNMTVFEYGNDIIVVDCGLAFPDDEMLGIDLVIPDITYLLKN---RE 63
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
++ ++++H H DH GALPY+ + + PIY T T
Sbjct: 64 KVKAIVLTHGHEDHIGALPYVLKQLNV--PIYGTRLT 98
>UniRef50_Q1B028 Cluster: Beta-lactamase-like protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep:
Beta-lactamase-like protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 813
Score = 52.4 bits (120), Expect = 8e-06
Identities = 34/95 (35%), Positives = 46/95 (48%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQI 398
P + LG +VG S LL G +++D G+ + PDF I P +
Sbjct: 390 PTLAFRALGGAGEVGGSSHLLDFGSTRVLVDAGIKPDGRGQLA-PDFEEIGP-------L 441
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
D II+H HLDHCGALP + + PIY T P+
Sbjct: 442 DGAIITHAHLDHCGALPLLVKNHPQL-PIYCTPPS 475
>UniRef50_A0LI39 Cluster: Beta-lactamase domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Beta-lactamase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 535
Score = 52.4 bits (120), Expect = 8e-06
Identities = 34/99 (34%), Positives = 49/99 (49%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 410
IT LGA V S LL G K ++DCG+ G + P P + + +
Sbjct: 3 ITCLGASGCVTGSSFLLDNGSK-YLIDCGLFQGGKQMEALNRKPW--PFNP--ADVSALF 57
Query: 411 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
++H H+DHCG +P + + G+ G IY T PT + ILL
Sbjct: 58 LTHAHIDHCGRIPKLVK-DGFRGRIYTTLPTAELCKILL 95
>UniRef50_Q2GCU7 Cluster: Metallo-beta-lactamase family, beta-CASP
subfamily; n=1; Neorickettsia sennetsu str.
Miyayama|Rep: Metallo-beta-lactamase family, beta-CASP
subfamily - Neorickettsia sennetsu (strain Miyayama)
Length = 542
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +3
Query: 237 PLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ----IDC 404
PLG ++G + L G+ IM+DCG G+ D P +V + + +
Sbjct: 10 PLGGTGEIGMNVTLYGYKGRWIMIDCGA--GFADAE-LPGIDIVVADISFIEERKDDLLA 66
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
+II+H H DHCGALPY+ + + P+Y T T
Sbjct: 67 IIITHIHEDHCGALPYLWDRLAV--PVYTTQFT 97
>UniRef50_Q11PK2 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
Metallo-beta-lactamase superfamily protein - Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 451
Score = 52.0 bits (119), Expect = 1e-05
Identities = 34/100 (34%), Positives = 51/100 (51%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K+T GA + V S LL G I++DCG ++D + E S+ID
Sbjct: 1 MKLTFWGAARKVTGSMYLLESLGYKILIDCGSD--FSDRHKVLTGGLFPFEA---SEIDL 55
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
VI++H H+DH G +P + GY G I T PT ++ +L
Sbjct: 56 VILTHAHVDHSGNIPALIR-AGYRGQILSTAPTAELSELL 94
>UniRef50_A1ID10 Cluster: Metallo-beta-lactamase family protein;
n=2; Desulfobacterales|Rep: Metallo-beta-lactamase
family protein - Candidatus Desulfococcus oleovorans
Hxd3
Length = 525
Score = 52.0 bits (119), Expect = 1e-05
Identities = 35/101 (34%), Positives = 52/101 (51%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K+T GA Q+V S L I+LDCG+ G DE + + +P P T I
Sbjct: 1 MKLTCYGATQEVTGSMHRLCSEHDCILLDCGLFQGRRDET--AEKNRKMPIDPAT--ITN 56
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+I+SH H+DH G LP + + G+ G I T T+ + +L
Sbjct: 57 IILSHAHIDHSGRLPLVVK-DGFAGRIVSTRATRDVCEYML 96
>UniRef50_Q8WPK6 Cluster: Similar to cleavage and polyadenylation
factor; n=1; Oikopleura dioica|Rep: Similar to cleavage
and polyadenylation factor - Oikopleura dioica
(Tunicate)
Length = 765
Score = 52.0 bits (119), Expect = 1e-05
Identities = 34/101 (33%), Positives = 48/101 (47%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K L D C LL + +LDCG + ++ + G QID
Sbjct: 5 VKFQSLSGFDDEAPHCHLLQIDDFKFLLDCG----WAEQHHEKIIDGLKRHG---RQIDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
++ISH L HCG LPY+S+ +G T PIYMT P + + L
Sbjct: 58 ILISHPDLLHCGMLPYLSK-LGITCPIYMTMPACKMGQMFL 97
>UniRef50_Q57626 Cluster: Uncharacterized protein MJ0162; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0162 -
Methanococcus jannaschii
Length = 421
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/87 (34%), Positives = 41/87 (47%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
G Q +G SC+ + ++LDCGM + + D +D VI+SH
Sbjct: 8 GGCQQIGMSCVEVETQKGRVLLDCGMSPDTGEIPKVDD-----------KAVDAVIVSHA 56
Query: 423 HLDHCGALPYMSEMIGYTGPIYMTHPT 503
HLDHCGA+P+ IY THPT
Sbjct: 57 HLDHCGAIPFYK-----FKKIYCTHPT 78
>UniRef50_Q194D1 Cluster: Beta-lactamase-like; n=3; Clostridia|Rep:
Beta-lactamase-like - Desulfitobacterium hafniense
(strain DCB-2)
Length = 570
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN--DERRFPDFSYIVPEGPITSQI 398
+K+ GA Q V S L+ G +++DCG+ G E + DF Y P +++
Sbjct: 1 MKLYFYGAAQVVTGSSYLVESEGYRVLIDCGLFQGSKALKELNYGDFPY----NP--AEL 54
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+ VI++H H DH G +P + + G+ G IY T T + ++L
Sbjct: 55 NAVILTHAHTDHSGLIPKLIK-YGFQGKIYATPETIKLCSVML 96
>UniRef50_Q1IJR0 Cluster: Beta-lactamase-like; n=1; Acidobacteria
bacterium Ellin345|Rep: Beta-lactamase-like -
Acidobacteria bacterium (strain Ellin345)
Length = 476
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 GKNIMLDCGMHMGYND--ERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEM 464
G +++DCG+ G + ER + D +P +ID V+++H HLDH G +P + +
Sbjct: 31 GFQLLIDCGLFQGQKEWRERNWRDTP--IP----AREIDAVVLTHAHLDHTGWIPRLVKE 84
Query: 465 IGYTGPIYMTHPTKAIAPILL 527
G+TGPIY T T + ++L
Sbjct: 85 -GFTGPIYATSATVDLCGVIL 104
>UniRef50_A7H6H0 Cluster: Beta-lactamase domain protein; n=2;
Anaeromyxobacter|Rep: Beta-lactamase domain protein -
Anaeromyxobacter sp. Fw109-5
Length = 550
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGM---HMGYNDERRFPDFSYIVPEGPIT 389
P ++I PLG ++G +C+ + G+ ++DCG+ + + PD ++
Sbjct: 3 PPVRIVPLGGLGEIGMNCMAIEADGRMAVVDCGILFPNEPIGVDVIAPDLGWLRER---R 59
Query: 390 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKA-IAPILLEGG 536
Q+ + ++H H DH GALP++ + P+Y T T A + P L E G
Sbjct: 60 EQVGAIYLTHGHEDHIGALPFLLREV--KAPVYGTRFTLALLRPRLEEAG 107
>UniRef50_P56185 Cluster: UPF0036 protein HP_1430; n=26;
Epsilonproteobacteria|Rep: UPF0036 protein HP_1430 -
Helicobacter pylori (Campylobacter pylori)
Length = 689
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG----YNDERRFPDFSYIVPEGPITS 392
+KITPLG ++G + +++ I++D GM + + PDFSY+ I
Sbjct: 141 VKITPLGGLGEIGGNMMVIETPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL---HQIKD 197
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMT 494
+I +II+H H DH GA PY+ + + + P+Y T
Sbjct: 198 KIAGIIITHAHEDHIGATPYLFKELQF--PLYGT 229
>UniRef50_Q9FMW0 Cluster: Genomic DNA, chromosome 5, P1 clone:MLE2;
n=8; Magnoliophyta|Rep: Genomic DNA, chromosome 5, P1
clone:MLE2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 528
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE-GPITS- 392
P ++I P+G ++G +C+L+ + I++D G+ DE P I+P+ G I
Sbjct: 108 PPLRILPIGGLGEIGMNCMLVGNYDRYILIDAGIMFPDYDE---PGIQKIMPDTGFIRRW 164
Query: 393 --QIDCVIISHFHLDHCGALPYMSEMIGYTGPIY 488
+I+ V+I+H H DH GALP++ + PI+
Sbjct: 165 KHKIEAVVITHGHEDHIGALPWVIPALDPNTPIF 198
>UniRef50_Q2S180 Cluster: Ysh1p: subunit of polyadenylation factor
I, putative; n=1; Salinibacter ruber DSM 13855|Rep:
Ysh1p: subunit of polyadenylation factor I, putative -
Salinibacter ruber (strain DSM 13855)
Length = 464
Score = 50.4 bits (115), Expect = 3e-05
Identities = 30/101 (29%), Positives = 45/101 (44%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K LG +G SC L + G I LD G + P F ++ S +D
Sbjct: 1 MKFLALGDTDGIGASCHFLDLNGSGIALDAGTDPQRDGPDSLPRFDWVGDRA--DSYVDH 58
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+++H H DH G+LP + + +MT TK + ILL
Sbjct: 59 TLVTHAHHDHMGSLPVLVRRFPH-AMAHMTDATKKLLDILL 98
>UniRef50_Q2AEK6 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=1; Halothermothrix orenii H
168|Rep: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - Halothermothrix orenii H 168
Length = 556
Score = 50.4 bits (115), Expect = 3e-05
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +3
Query: 216 MPD-IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRF----PDFSYIVPEG 380
MP I I PLG +++G + I++ I+LD G+ +D+ + PD SY+V
Sbjct: 1 MPQKISIIPLGGCREIGNNMIVIESKKDIIILDSGVLFPEDDDFGYELIIPDISYLVER- 59
Query: 381 PITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+I +I SH H DH GA+P++ E I P++ T T + LE
Sbjct: 60 --KKKIRGIIFSHGHEDHIGAVPFLLERI--NPPLFGTDLTMGLIKSKLE 105
>UniRef50_Q74C32 Cluster: Metallo-beta-lactamase family protein;
n=2; Desulfuromonadales|Rep: Metallo-beta-lactamase
family protein - Geobacter sulfurreducens
Length = 475
Score = 50.0 bits (114), Expect = 4e-05
Identities = 24/77 (31%), Positives = 47/77 (61%)
Frame = +3
Query: 300 IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTG 479
I++DCG+ G ND F +I + P+ ++ ++++H H+DHCG +P++ G+ G
Sbjct: 27 ILIDCGLLQG-NDGAGGKRFPFI--DFPL-DRVKGLVLTHVHIDHCGRIPHLLG-AGFQG 81
Query: 480 PIYMTHPTKAIAPILLE 530
PI+ + + + P++LE
Sbjct: 82 PIWCSEASALLLPLVLE 98
>UniRef50_A5URN4 Cluster: Beta-lactamase domain protein; n=5;
Chloroflexi (class)|Rep: Beta-lactamase domain protein -
Roseiflexus sp. RS-1
Length = 561
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 392
++ PLG +VGR+ +L + ++LDCG+ D + PD +Y+ +
Sbjct: 6 LRAIPLGGAGEVGRNMWVLEQNDEILVLDCGVMFPEADMLGVDLVLPDITYLRDQ---KD 62
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMT 494
+I ++++H H DH GA+PY+ + + PIY T
Sbjct: 63 KIKAIVLTHGHEDHIGAVPYLVPELDFP-PIYGT 95
>UniRef50_A7PHF3 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=4; Viridiplantae|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 880
Score = 50.0 bits (114), Expect = 4e-05
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCG-MHMGYND---ERRFPDFSYIVPEGPI 386
P +++ P+G ++G +C+L+ + I++D G M Y++ ++ PD ++I
Sbjct: 76 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKW--- 132
Query: 387 TSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIY 488
+ +I+ V+I+H H DH GALP++ + PI+
Sbjct: 133 SHKIEAVVITHGHEDHIGALPWVIPALDSHTPIF 166
>UniRef50_A2EDT7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 700
Score = 50.0 bits (114), Expect = 4e-05
Identities = 31/101 (30%), Positives = 49/101 (48%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
I PL Q LL + +LDCG + ++ R D I + I S ++
Sbjct: 8 ISFQPLSGAQSTTPFAYLLHVDEFTFLLDCG----WTEDFRLED---IQTQIEICSHVNA 60
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
V++SH ++H GALPY+ G + PI+ T P A+ +L+
Sbjct: 61 VLLSHASIEHIGALPYLCSH-GLSAPIFATMPIPALGSLLI 100
>UniRef50_Q980D0 Cluster: MRNA 3'-end processing factor, putative;
n=4; Sulfolobaceae|Rep: MRNA 3'-end processing factor,
putative - Sulfolobus solfataricus
Length = 492
Score = 49.6 bits (113), Expect = 6e-05
Identities = 32/97 (32%), Positives = 53/97 (54%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
LG G++VGRS I + +I+LD G++ DE+ P+F P + ++ ++SH
Sbjct: 78 LGGGREVGRSAIEVGNSDGSIILDYGVNF---DEKDNPNF----PLQEMPGKVKGFVVSH 130
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
HLDH GALP + ++ +Y T T+ I +L+
Sbjct: 131 AHLDHIGALP-IYQIGSLNTKVYGTVATRIITETMLK 166
>UniRef50_Q8ZTD5 Cluster: MRNA 3'-end processing factor,
conjectural; n=5; Thermoproteaceae|Rep: MRNA 3'-end
processing factor, conjectural - Pyrobaculum aerophilum
Length = 430
Score = 49.6 bits (113), Expect = 6e-05
Identities = 31/100 (31%), Positives = 48/100 (48%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+KI LG +VGR +L+ I+LD G+ ND+ FP ++ P +
Sbjct: 1 MKIRLLGGAGEVGRLAVLIKTASNGILLDYGVSFDANDKPVFP--LHVRPR-----DLTA 53
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
+SH HLDH G LP S + P+Y T T ++ ++
Sbjct: 54 TFLSHAHLDHSGGLP--SLYVSTKTPLYSTPLTMELSDLM 91
>UniRef50_A3DMW0 Cluster: Beta-lactamase domain protein; n=1;
Staphylothermus marinus F1|Rep: Beta-lactamase domain
protein - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 427
Score = 49.6 bits (113), Expect = 6e-05
Identities = 31/101 (30%), Positives = 51/101 (50%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+ + LG G +VGR+ L+ K +LD G++ D +FP + PI ++
Sbjct: 2 VHVEILGGGNEVGRAAYLVVDNNKKFLLDYGVNFDEEDHPQFP-----LHVRPI--ELSG 54
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+ I+H HLDH GA P + I +++T PT I +L+
Sbjct: 55 LAITHAHLDHIGAAPLL--YITGKPRVFVTKPTLEIGKLLI 93
>UniRef50_A4RR19 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 715
Score = 49.2 bits (112), Expect = 7e-05
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +3
Query: 270 CILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALP 449
C +++ G NI+LDCG +ND +F D + P I ++D V+ISH H GALP
Sbjct: 2 CYHVSIDGCNILLDCG----WND--KF-DVDMLKPLAAIAPKVDAVLISHPDTAHLGALP 54
Query: 450 YMSEMIGYTGPIYMTHP 500
Y +G +Y T P
Sbjct: 55 YAFGKLGMNCKVYATLP 71
>UniRef50_Q0W8H2 Cluster: MRNA 3-end processing factor; n=5;
Euryarchaeota|Rep: MRNA 3-end processing factor -
Uncultured methanogenic archaeon RC-I
Length = 432
Score = 48.8 bits (111), Expect = 1e-04
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
I+I+ GAG++VGRS L+ I+LD G+ +D P++ P+G + ++
Sbjct: 21 IQISIHGAGREVGRSAFLID---DKILLDYGIKP--SDP---PEY----PQGDVRPEV-- 66
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
V++SH HLDHCG +P + ++ + T PTK + +L E
Sbjct: 67 VVVSHGHLDHCGVVPNLMDL---EPKVIATPPTKQLTRLLAE 105
>UniRef50_Q605H9 Cluster: Metallo-beta-lactamase family protein;
n=1; Methylococcus capsulatus|Rep:
Metallo-beta-lactamase family protein - Methylococcus
capsulatus
Length = 461
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +3
Query: 237 PLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS----QIDC 404
PLG ++G + L G I +D G+ G +D FPD + ++P+ + ++
Sbjct: 12 PLGGTGEIGMNLTLYGHDGAWIAVDMGITFGGDD---FPDHAVMMPDPAFIAARRERLAG 68
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIA 515
++++H H DH GALPY+ + + P+Y T T A+A
Sbjct: 69 IVLTHGHEDHVGALPYLWKRL--RCPVYATPFTAALA 103
>UniRef50_A6PE29 Cluster: Beta-lactamase domain protein; n=1;
Shewanella sediminis HAW-EB3|Rep: Beta-lactamase domain
protein - Shewanella sediminis HAW-EB3
Length = 526
Score = 48.0 bits (109), Expect = 2e-04
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKN-IMLDCGMHMGYND--ERRFPDFSYIVPEGPITSQ 395
++I GA V SC L + K+ +++DCG+ G G IT+
Sbjct: 7 VEIIHHGAVNGVTGSCHQLVINEKSSLLIDCGLFQGAETAGSSNAEQLKIAFDIGSITA- 65
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
++++H H+DH G +PY+ G+ PI+ T T A+ P+++E
Sbjct: 66 ---LLVTHCHIDHVGRIPYLL-AAGFDQPIFATTATAALLPMVIE 106
>UniRef50_A4XTF4 Cluster: Beta-lactamase domain protein; n=12;
Gammaproteobacteria|Rep: Beta-lactamase domain protein -
Pseudomonas mendocina ymp
Length = 488
Score = 47.6 bits (108), Expect = 2e-04
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKN-IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
GA V SC L M ++ +++DCG+ G S + + I ++ +H
Sbjct: 10 GAVTGVTGSCHQLQMDERHGLLVDCGLFQGAETSPEGRAGSERLAIDFSLAGIKALVATH 69
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
H+DH G +PY+ G+ GPI + P+ + PI+L+
Sbjct: 70 VHIDHVGRIPYLL-AAGFKGPILCSEPSAKLLPIVLK 105
>UniRef50_Q3LW64 Cluster: Regulator of transcription that contains
myb domains; n=1; Bigelowiella natans|Rep: Regulator of
transcription that contains myb domains - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 636
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/102 (26%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Frame = +3
Query: 201 VVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGM------HMGYNDERRFPDFS 362
+ +++ DI + PLG ++G +C+L+ + I++DCG+ H+G ++ PD +
Sbjct: 65 IEQVLDKDIIVVPLGGLGEIGMNCMLIGSKKRFILIDCGIMFTDLSHLGI--QKVIPDIN 122
Query: 363 YIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIY 488
++ I + I+ +II+H H DH GA+ ++ ++ +Y
Sbjct: 123 FLT---HIQNLIEGLIITHGHEDHIGAINWVLPILRTDALVY 161
>UniRef50_A2BK26 Cluster: Putative exoribonuclease; n=1;
Hyperthermus butylicus DSM 5456|Rep: Putative
exoribonuclease - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 427
Score = 47.6 bits (108), Expect = 2e-04
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKN---IMLDCGMHMGYNDERRFPDFSYIVPEGPI 386
M I + LG G +VGR +L+ + + I+LD G++ DE P F+ P
Sbjct: 1 MAKIALRILGGGGEVGRLSVLVRVRPEERDGILLDAGVNF---DEEDRPVFAATYPP--- 54
Query: 387 TSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+ +I+SH HLDH G P I +Y T PT +A ++LE
Sbjct: 55 -KYVKAMILSHAHLDHIGTAPMY--FISGRPRVYATKPTLEMAKLMLE 99
>UniRef50_Q04EG7 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=3;
Leuconostocaceae|Rep: Predicted hydrolase of the
metallo-beta-lactamase superfamily - Oenococcus oeni
(strain BAA-331 / PSU-1)
Length = 636
Score = 47.2 bits (107), Expect = 3e-04
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Frame = +3
Query: 210 LIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPE 377
++ + I P G ++ G++ +T+ + +LD G+ D + PDF+Y+V
Sbjct: 4 MVKTALSIIPFGGVRENGKNMYAVTVNDEIYILDAGLKYPETDLLGVDVVVPDFNYLVDH 63
Query: 378 GPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIA 515
Q+ V ++H H D GALPY+ E++ P++ T T A+A
Sbjct: 64 A---DQVVGVFLTHGHADAIGALPYLLEVLRV--PVFGTEFTLALA 104
>UniRef50_A1I7A4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 549
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHM--GY--NDERRFPDFSYIVPEGPITS 392
+KITPLG +++G + ++ G +D G+ GY + PD YI +G
Sbjct: 2 LKITPLGGTREIGLNMTVIEYGDTAFAIDAGLMFPEGYMLGVDIVLPDMDYIREKG---K 58
Query: 393 QIDCVIISHFHLDHCGALPYM 455
V+++H H DH GA+PY+
Sbjct: 59 NFAAVVLTHGHEDHIGAIPYL 79
>UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 2; n=7; Coelomata|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 2 - Drosophila melanogaster (Fruit fly)
Length = 756
Score = 47.2 bits (107), Expect = 3e-04
Identities = 29/92 (31%), Positives = 43/92 (46%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
IK+ + D C +L + I+LDCG + +F D ++I +D
Sbjct: 5 IKLHTISGAMDESPPCYILQIDDVRILLDCGW------DEKF-DANFIKELKRQVHTLDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHP 500
V++SH H GALPY+ +G PIY T P
Sbjct: 58 VLLSHPDAYHLGALPYLVGKLGLNCPIYATIP 89
>UniRef50_Q1DC87 Cluster: Metallo-beta-lactamase family protein;
n=2; Cystobacterineae|Rep: Metallo-beta-lactamase family
protein - Myxococcus xanthus (strain DK 1622)
Length = 546
Score = 46.8 bits (106), Expect = 4e-04
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 392
+ + PLG ++G + +++ G+ +++D G+ + PDFS++ +
Sbjct: 2 LHVIPLGGLGEIGLNSMVIACRGEMLLIDAGLMFPSAGMPGVDIIIPDFSHLKQNA---A 58
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
Q+ V+++H H DH GALPY+ + P+Y T T A+A LE
Sbjct: 59 QLKGVLLTHGHEDHLGALPYLLNEVPV--PVYGTRFTLAMARHRLE 102
>UniRef50_A6Q3H4 Cluster: RNA-metabolising metallo-beta-lactamase;
n=8; Proteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Nitratiruptor sp. (strain
SB155-2)
Length = 462
Score = 46.8 bits (106), Expect = 4e-04
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMG-GKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
GA + V SC + G ++DCGM G ++ + + P G +ID ++++H
Sbjct: 8 GAAEVVTGSCHFVKFDDGTKALIDCGMFQGLDEWKNYE------PLGFNAKEIDYLLVTH 61
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
HLDH G +P + + G+ G I T T + I+L
Sbjct: 62 GHLDHVGRIPLLYKE-GFRGKIIATAATFELMKIVL 96
>UniRef50_A1VFA6 Cluster: Beta-lactamase domain protein; n=4;
Desulfovibrionaceae|Rep: Beta-lactamase domain protein -
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Length = 554
Score = 46.8 bits (106), Expect = 4e-04
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGM------HMGYNDERRFPDFSYIVPEG 380
P ITPLG ++G +C + + +++DCG+ H+G + P F +I+ +
Sbjct: 6 PHFTITPLGGLGEIGLNCQVWSTADSTVLIDCGLMFPDDYHLGV--DVVIPRFDHILQQ- 62
Query: 381 PITSQIDCVIISHFHLDHCGALPYM 455
++ +I++H H DH GALP++
Sbjct: 63 --RDKVRGIILTHGHEDHIGALPWL 85
>UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31;
Actinobacteria (class)|Rep: UPF0036 protein
Cgl1970/cg2160 - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 718
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE-GPITS--- 392
++I LG ++GR+ + + +++DCG+ + E P I+P+ GPI
Sbjct: 155 LRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGE---PGVDLILPDFGPIEDHLH 211
Query: 393 QIDCVIISHFHLDHCGALPYMSEM 464
++D ++++H H DH GA+P++ ++
Sbjct: 212 RVDALVVTHGHEDHIGAIPWLLKL 235
>UniRef50_Q1IPV7 Cluster: Beta-lactamase-like precursor; n=2;
Acidobacteria|Rep: Beta-lactamase-like precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 556
Score = 46.4 bits (105), Expect = 5e-04
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 392
+++ PLG + G +C+ + G +++D GM + + PD SY+V
Sbjct: 6 LQVIPLGGLGEFGMNCMAVRYGDDIVVIDAGMMFPEAELLGVDIVVPDISYLVEN---RD 62
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
++ ++++H H DH GALP++ + PIY T T A LE
Sbjct: 63 KVRAILLTHGHEDHIGALPWILSELNV--PIYGTEFTLAYVEGKLE 106
>UniRef50_Q0EST3 Cluster: Beta-lactamase-like; n=2;
Thermoanaerobacter ethanolicus|Rep: Beta-lactamase-like
- Thermoanaerobacter ethanolicus X514
Length = 616
Score = 46.4 bits (105), Expect = 5e-04
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +3
Query: 249 GQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHL 428
G ++G S L++ G NI+LD G + D+ + + +P ID VII+H HL
Sbjct: 210 GDNIGASSYLVSYEGINILLDAGALI--KDKTLYYNSIKNLPID--IKDIDLVIITHVHL 265
Query: 429 DHCGALPYMSEMIGYTGPIYMTHPTKAI-APILLEG 533
DH G + + G PI ++ PTK I I L G
Sbjct: 266 DHSGGIVELLRK-GLNSPIIISRPTKEILKQIFLRG 300
>UniRef50_A5TU13 Cluster: Metal-dependent hydrolase; n=3;
Fusobacterium nucleatum|Rep: Metal-dependent hydrolase -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 631
Score = 46.4 bits (105), Expect = 5e-04
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +3
Query: 195 LDVVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVP 374
+ V K + + + PLG ++VG++C ++ + I++D G + DE P ++P
Sbjct: 70 IKVSKKDLDKMYVIPLGGLEEVGKNCTIIQYKDEIIIVDAGAI--FPDEN-LPGIDLVIP 126
Query: 375 EGPIT----SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAI 512
+ S++ + ++H H DH G +PY+ E I IY T A+
Sbjct: 127 DYTFLENNKSKVKGLFVTHGHEDHIGGIPYLYEKIEKDTVIYGGKLTNAL 176
>UniRef50_A4EC75 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 556
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRF----PDFSYIVPEGPITS 392
+KI PLG +G++ + G +++D G+ + + PD++Y++
Sbjct: 9 LKIIPLGGLDGIGKNMTVFECGDDMVLVDAGLMFPDDSQPGIDLVLPDYTYVLEN---EE 65
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
++ ++++H H DH G+LPY+ + + PI+ + T
Sbjct: 66 KLRGIVVTHGHEDHTGSLPYLLQDLNNKVPIFSSKLT 102
>UniRef50_A1ZG78 Cluster: Exonuclease of the beta-lactamase fold
involved in RNA processing; n=1; Microscilla marina ATCC
23134|Rep: Exonuclease of the beta-lactamase fold
involved in RNA processing - Microscilla marina ATCC
23134
Length = 476
Score = 46.4 bits (105), Expect = 5e-04
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGK-NIMLDCGMHMGYNDERRFPD----FSYIVPEGPIT 389
+++T GA + V S LL + +++DCG H + + D + I P P
Sbjct: 1 MRLTFWGAARQVTGSMHLLELDNDFKVLIDCG-HDLERERKPLTDENGLYQGIFPFEP-- 57
Query: 390 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
SQI+ V+++H H+DH G LP + G+ G IY T T + +LL
Sbjct: 58 SQINAVVLTHAHIDHSGFLPNLVRE-GFEGVIYCTDATYDLTNLLL 102
>UniRef50_Q01GI5 Cluster: Polyadenylation cleavage/specificity
factor 100 kDa subunit; n=1; Ostreococcus tauri|Rep:
Polyadenylation cleavage/specificity factor 100 kDa
subunit - Ostreococcus tauri
Length = 807
Score = 46.4 bits (105), Expect = 5e-04
Identities = 29/86 (33%), Positives = 40/86 (46%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
GAG+ C +++ G NI+LDCG + D + P I +D V+ISH
Sbjct: 40 GAGERA--MCYHVSIDGCNILLDCGWTDAF-------DVEMLKPLEAIAKDVDAVLISHP 90
Query: 423 HLDHCGALPYMSEMIGYTGPIYMTHP 500
H GALPY +G +Y T P
Sbjct: 91 DTAHLGALPYAFGKLGMNCKVYATLP 116
>UniRef50_Q07ZA5 Cluster: Beta-lactamase domain protein; n=3;
Alteromonadales|Rep: Beta-lactamase domain protein -
Shewanella frigidimarina (strain NCIMB 400)
Length = 521
Score = 46.0 bits (104), Expect = 7e-04
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +3
Query: 291 GKNI---MLDCGMHMGYNDE-RRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMS 458
G NI ++DCG+ G + D I + I +II+H H+DH G +PY+
Sbjct: 34 GNNISSYLIDCGLFQGAETAGKSSADQLQITFD---IQHIKALIITHCHIDHVGRIPYLL 90
Query: 459 EMIGYTGPIYMTHPTKAIAPILLE 530
G+ PIY T T A+ P+++E
Sbjct: 91 -AAGFNQPIYATTATAALLPLVIE 113
>UniRef50_Q5NLC0 Cluster: Metallo-beta-lactamase hydrolase subunit;
n=8; Sphingomonadales|Rep: Metallo-beta-lactamase
hydrolase subunit - Zymomonas mobilis
Length = 546
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ----IDCV 407
LG ++G + L GK +M+D G+ G + +P I+P+ + + +
Sbjct: 13 LGGSGEIGMNANLYGCDGKWVMVDLGITFG---DASYPGVEVILPDIEFIEERAKDLLGI 69
Query: 408 IISHFHLDHCGALPYMSEMIGYTGPIYMT 494
+I+H H DH GA+PY++ +G PIY T
Sbjct: 70 VITHGHEDHIGAIPYLAADLGV--PIYAT 96
>UniRef50_Q5GSG7 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=10;
Rickettsiales|Rep: Predicted hydrolase of the
metallo-beta-lactamase superfamily - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 544
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +3
Query: 237 PLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ----IDC 404
PLG +G + L GK IM+D G+ G+ DE P ++ + +Q +
Sbjct: 12 PLGGVGRIGMNVNLYHYRGKWIMIDLGI--GFADET-MPGIELLIADVSFIAQRKKDLLG 68
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMT 494
+II+H H DHCGA+PY+ + + PIY T
Sbjct: 69 IIITHAHEDHCGAVPYLWKEL--QCPIYTT 96
>UniRef50_Q1GQ91 Cluster: Beta-lactamase-like protein; n=43;
Bacteria|Rep: Beta-lactamase-like protein - Sphingopyxis
alaskensis (Sphingomonas alaskensis)
Length = 473
Score = 45.2 bits (102), Expect = 0.001
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
I I LGA V S LL IM+DCG+ G E R ++ + + ID
Sbjct: 22 ISIAFLGAAGTVTGSRYLLGDRSAKIMIDCGLFQG-GRELRERNWEPALSDH---RAIDT 77
Query: 405 VIISHFHLDHCGALP-YMSEMIGYTGPIYMTHPTKAIAPILL 527
++++H HLDH G +P ++ E G++G I T T + +LL
Sbjct: 78 IVLTHAHLDHSGYIPRFVKE--GWSGRILCTDATADLCGLLL 117
>UniRef50_Q9NV88 Cluster: Integrator complex subunit 9; n=41;
Eumetazoa|Rep: Integrator complex subunit 9 - Homo
sapiens (Human)
Length = 658
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +3
Query: 351 PDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
P+F E S +D ++IS++H ALPY++E G+TG +Y T PT I +L+E
Sbjct: 81 PEFCLPETELIDLSTVDVILISNYHC--MMALPYITEHTGFTGTVYATEPTVQIGRLLME 138
>UniRef50_A3ZTP5 Cluster: Metallo-beta-lactamase family protein;
n=1; Blastopirellula marina DSM 3645|Rep:
Metallo-beta-lactamase family protein - Blastopirellula
marina DSM 3645
Length = 462
Score = 44.0 bits (99), Expect = 0.003
Identities = 30/100 (30%), Positives = 49/100 (49%)
Frame = +3
Query: 228 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 407
+IT GA V S L+ G +++DCG+ G R ++ + P T ++ V
Sbjct: 3 RITFYGAAGTVTGSKYLVEAGKAKVLVDCGLFQGLKKLREL-NWKKL-PFDAAT--VNSV 58
Query: 408 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+++H H+DH G LP G+ + T TK +A +LL
Sbjct: 59 VLTHAHIDHIGFLPRFVR-DGFRNKVVCTPATKELAKLLL 97
>UniRef50_Q2YZG4 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=1;
uncultured gamma proteobacterium|Rep: Predicted
exonuclease of the beta-lactamase fold involved in RNA
processing - uncultured gamma proteobacterium
Length = 426
Score = 43.6 bits (98), Expect = 0.004
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +3
Query: 396 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
+D +++SH H+DH G +P + + G+ GP+Y T PT + ++L
Sbjct: 15 VDAMLVSHAHMDHSGNIPNLVKK-GFKGPVYATPPTVDLCQLML 57
>UniRef50_Q2LTE7 Cluster: Metallo-beta-lactamase superfamily; n=1;
Syntrophus aciditrophicus SB|Rep: Metallo-beta-lactamase
superfamily - Syntrophus aciditrophicus (strain SB)
Length = 831
Score = 43.2 bits (97), Expect = 0.005
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Frame = +3
Query: 153 LIFIILKRIFS*ASL--DVVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHM 326
L+FI++ + S+ V ++ ++ +T + Q G + ++ GGK ++LD G
Sbjct: 537 LLFIVMLTFLAGGSVLQSVQRINNRELTVTAIDVHQ--GSATLVRFPGGKTLLLDGGGLP 594
Query: 327 GYN-DERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSE 461
G D RF ++ EG +ID V++SH H DH G LP++ E
Sbjct: 595 GDAFDVGRFVVAPFLWHEG--IRKIDIVVLSHPHADHLGGLPFILE 638
>UniRef50_A4SYL2 Cluster: RNA-metabolising metallo-beta-lactamase;
n=8; Betaproteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Polynucleobacter sp.
QLW-P1DMWA-1
Length = 471
Score = 43.2 bits (97), Expect = 0.005
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Frame = +3
Query: 225 IKITPLGAGQDV--GRSCILLTMGGK--NIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 392
+KI GA +V R + + + GK + M+D G+ G R + + P
Sbjct: 1 MKIQFFGAAGEVTGSRHSVEVMLSGKPRHFMVDYGLFQG----GREANTKNLEPLPFAAK 56
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGGPGTQFA 554
I+ V+++H H+DH G LP + G+ G IY T T + ILL Q A
Sbjct: 57 DIEFVVLTHAHIDHSGLLPRLCAQ-GFKGSIYCTPATYELLKILLPDSAHLQLA 109
>UniRef50_A0RTJ7 Cluster: Hydrolase of the metallo-beta-lactamase
superfamily; n=1; Cenarchaeum symbiosum|Rep: Hydrolase
of the metallo-beta-lactamase superfamily - Cenarchaeum
symbiosum
Length = 496
Score = 43.2 bits (97), Expect = 0.005
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 390 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGGPGTQF 551
+ +D V++SH H+DHC + Y+ I P+Y T TK I + + G G ++
Sbjct: 87 TSVDAVLLSHAHVDHCAYIKYLRPEI----PVYCTEATKMILQVFDDAGMGEEY 136
>UniRef50_Q9P2I0 Cluster: Cleavage and polyadenylation specificity
factor subunit 2; n=26; Coelomata|Rep: Cleavage and
polyadenylation specificity factor subunit 2 - Homo
sapiens (Human)
Length = 782
Score = 42.7 bits (96), Expect = 0.006
Identities = 32/92 (34%), Positives = 41/92 (44%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
IK+T L Q+ C LL + +LDCG DE D + + QID
Sbjct: 5 IKLTTLSGVQEESALCYLLQVDEFRFLLDCGW-----DEHFSMDIIDSLRKH--VHQIDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHP 500
V++SH H GALPY +G IY T P
Sbjct: 58 VLLSHPDPLHLGALPYAVGKLGLNCAIYATIP 89
>UniRef50_Q4S732 Cluster: Chromosome 14 SCAF14723, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 14
SCAF14723, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 765
Score = 42.3 bits (95), Expect = 0.008
Identities = 30/92 (32%), Positives = 40/92 (43%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
IK+T + Q+ C LL + +LDCG DE D + Q+D
Sbjct: 5 IKLTAVSGVQEESALCYLLQVDEFRFLLDCGW-----DENFSMDIIDAMKR--YVHQVDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHP 500
V++SH H GALPY +G IY T P
Sbjct: 58 VLLSHPDPIHLGALPYAVGKLGLNCTIYATIP 89
>UniRef50_A6VTQ0 Cluster: Beta-lactamase domain protein; n=9;
Proteobacteria|Rep: Beta-lactamase domain protein -
Marinomonas sp. MWYL1
Length = 447
Score = 41.9 bits (94), Expect = 0.011
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDF--SYIVPEGP--IT 389
D+ PLG ++G + L G+ +M+DCG+ +N+ D S IV P I+
Sbjct: 7 DLWFLPLGGTGEIGMNMNLYGHDGQWLMVDCGV--SFNEPLTADDLRTSEIVCADPRFIS 64
Query: 390 SQ---IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMT 494
Q + ++I+H H DH GALP++ + P+Y T
Sbjct: 65 EQKERLAGIVITHAHEDHVGALPFLWRR--FKCPVYTT 100
>UniRef50_UPI000049A022 Cluster: cleavage and polyadenylation
specificity factor; n=1; Entamoeba histolytica
HM-1:IMSS|Rep: cleavage and polyadenylation specificity
factor - Entamoeba histolytica HM-1:IMSS
Length = 693
Score = 41.5 bits (93), Expect = 0.015
Identities = 29/91 (31%), Positives = 42/91 (46%)
Frame = +3
Query: 276 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYM 455
LL + I+LDCG+ + E I+ + S ID V+ISH L H GALPY+
Sbjct: 20 LLEINSTKILLDCGVDCNFTRE--------IIEKYDSISDIDIVLISHSDLRHMGALPYI 71
Query: 456 SEMIGYTGPIYMTHPTKAIAPILLEGGPGTQ 548
+ IY T P + + ++ TQ
Sbjct: 72 ANK-NPNCSIYTTDPVGKMGYLCMKEAIKTQ 101
>UniRef50_Q0C1C8 Cluster: Metallo-beta-lactamase family protein;
n=3; Alphaproteobacteria|Rep: Metallo-beta-lactamase
family protein - Hyphomonas neptunium (strain ATCC
15444)
Length = 565
Score = 41.5 bits (93), Expect = 0.015
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKN----IMLDCGMHMGYNDERRFPDFSYIVPEGPIT 389
++ PLG ++G + G N I++D G+ G +D D P+ I
Sbjct: 14 ELVFLPLGGCGEIGMNLNAYGYGPPNARRWIIVDVGVTFGNSDTPGI-DLICADPDYLIG 72
Query: 390 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMT 494
ID V ++H H DH GA+ + M+ PIY T
Sbjct: 73 EHIDAVFLTHAHEDHIGAVGLLYPMLKTKAPIYAT 107
>UniRef50_P47385 Cluster: UPF0036 protein MG139; n=4;
Mycoplasma|Rep: UPF0036 protein MG139 - Mycoplasma
genitalium
Length = 569
Score = 41.5 bits (93), Expect = 0.015
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 228 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITSQ 395
KI G Q+VG++ + + I++DCG+ +D P F +++ S+
Sbjct: 17 KIYAFGGIQEVGKNMYGIEYDDEIIIIDCGIKFASDDLLGINGIIPSFEHLIEN---QSK 73
Query: 396 IDCVIISHFHLDHCGALPYMSEMI 467
+ + I+H H DH G +PY+ + +
Sbjct: 74 VKALFITHGHEDHIGGVPYLLKQV 97
>UniRef50_Q3UGU6 Cluster: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270022C12 product:cleavage and
polyadenylation specific factor 2, full insert sequence;
n=5; Eutheria|Rep: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270022C12 product:cleavage and
polyadenylation specific factor 2, full insert sequence
- Mus musculus (Mouse)
Length = 412
Score = 41.1 bits (92), Expect = 0.019
Identities = 31/92 (33%), Positives = 41/92 (44%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
IK+T L Q+ C LL + +LDCG DE D + + QID
Sbjct: 5 IKLTTLSGVQEESALCYLLQVDEFRFLLDCGW-----DEHFSVDIIDSLRKH--VHQIDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHP 500
V++SH H GALP+ +G IY T P
Sbjct: 58 VLLSHPDPLHLGALPFAVGKLGLNCAIYATIP 89
>UniRef50_A7Q525 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 258
Score = 41.1 bits (92), Expect = 0.019
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +3
Query: 258 VGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHC 437
+GR + GK I+ DCG+ Y F I P S ID +++ FHLDH
Sbjct: 1 MGRYYAYTSYKGKTILFDCGILPTYTGTAALSYFDEIDP-----STIDVLLVIPFHLDHA 55
Query: 438 GALPY 452
+LPY
Sbjct: 56 ASLPY 60
>UniRef50_Q6MTU5 Cluster: CONSERVED HYPOTEHTICAL PROTEIN; n=3;
Mollicutes|Rep: CONSERVED HYPOTEHTICAL PROTEIN -
Mycoplasma mycoides subsp. mycoides SC
Length = 583
Score = 40.7 bits (91), Expect = 0.026
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGP 383
MPDIK T LG + G++ +L + +LD G+ D + P F YI
Sbjct: 1 MPDIKFTALGGQDERGKNLYVLEIDNDFFILDAGVKYPEKDILGIDTVIPKFDYIKQN-- 58
Query: 384 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPI 521
+I + +++ + GA+PY+ + I PIY T+ IA I
Sbjct: 59 -KKKIKGIFLTNPSAYNMGAVPYLLKEI--KAPIYCNEITELIAKI 101
>UniRef50_Q6KH27 Cluster: Predicted hydrolase; n=13; Mycoplasma|Rep:
Predicted hydrolase - Mycoplasma mobile
Length = 604
Score = 40.7 bits (91), Expect = 0.026
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRF----PDFSYIVPEGP 383
M K+ LG Q++G+S +L K ++D G+ + PD+SY+
Sbjct: 1 MQPTKLFGLGGVQEIGKSTFVLEHNKKIFIIDAGIKFADSFTTGIKGIIPDYSYLKAN-- 58
Query: 384 ITSQIDCVIISHFHLDHCGALPYM 455
I + I+H H DH G +PY+
Sbjct: 59 -QDNIQALFITHGHEDHIGGIPYL 81
>UniRef50_Q1NUX3 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase precursor; n=1; delta
proteobacterium MLMS-1|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase precursor - delta proteobacterium
MLMS-1
Length = 530
Score = 40.7 bits (91), Expect = 0.026
Identities = 30/95 (31%), Positives = 43/95 (45%)
Frame = +3
Query: 243 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 422
G Q V S +L ++D G +G +D +P PE +I V I+H
Sbjct: 34 GGQQTVSGSLHVLKSPDGLYLIDVGRFIG-DDGANYP-----WPEDIPVGEIKAVFITHT 87
Query: 423 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
H DH G LP + GY GPI ++ + IA + L
Sbjct: 88 HADHIGRLPLLLRQ-GYRGPILLSRASYEIARLNL 121
>UniRef50_Q1AW46 Cluster: Putative uncharacterized protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Putative
uncharacterized protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 547
Score = 40.7 bits (91), Expect = 0.026
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Frame = +3
Query: 231 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERR------FPDFSYIVPEGPITS 392
+ PLG ++G++ + +++D GM + DE PDF+Y+
Sbjct: 3 VVPLGGLGEIGKNMTAVHQRSGMLVVDAGM--AFPDEEMPGIDLVLPDFTYLREHA---D 57
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
++ ++++H H DH GA+PY+ + + P+Y T T + L+
Sbjct: 58 RLRGILLTHGHEDHVGAIPYL--LREFRAPVYGTRLTLGLVESKLQ 101
>UniRef50_Q03AI9 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=1; Lactobacillus
casei ATCC 334|Rep: Predicted hydrolase of the
metallo-beta-lactamase superfamily - Lactobacillus casei
(strain ATCC 334)
Length = 413
Score = 40.7 bits (91), Expect = 0.026
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 336 DERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIA 515
D + P + + P + + ISH H+DH GAL Y+ + I PIY++ P+ +
Sbjct: 47 DNGKLPHVPELFFDQPDVYTHEAIFISHLHIDHMGALQYLKKPI----PIYLSEPSYKLY 102
Query: 516 PILLEGG 536
+L++ G
Sbjct: 103 QLLIKLG 109
>UniRef50_A0WB37 Cluster: DNA internalization-related competence
protein ComEC/Rec2 precursor; n=1; Geobacter lovleyi
SZ|Rep: DNA internalization-related competence protein
ComEC/Rec2 precursor - Geobacter lovleyi SZ
Length = 814
Score = 40.7 bits (91), Expect = 0.026
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVP--EGPITSQI 398
+++T L GQ G + ++ G+ +++D G ++ D R Y+VP G QI
Sbjct: 535 LRMTFLSVGQ--GDATLIQLPDGRTMLVDGGGYL--RDTGRDFGERYLVPALHGLSVKQI 590
Query: 399 DCVIISHFHLDHCGALPYMSE 461
D +++SH H DH G LP ++E
Sbjct: 591 DIMVLSHPHPDHLGGLPAVAE 611
>UniRef50_A7RPX1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 737
Score = 40.7 bits (91), Expect = 0.026
Identities = 28/92 (30%), Positives = 39/92 (42%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
IK+ L D C LL + +LDCG +N+ D + Q+D
Sbjct: 5 IKLNVLSGAHDEAPLCYLLQVDEFRFLLDCG----WNETL---DMEIMESIKRHVQQVDA 57
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHP 500
V++S + H G LPY+ G PIY T P
Sbjct: 58 VLVSFPDIYHMGGLPYLVGKCGLHCPIYTTIP 89
>UniRef50_Q1IUF3 Cluster: Beta-lactamase-like precursor; n=1;
Acidobacteria bacterium Ellin345|Rep:
Beta-lactamase-like precursor - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 40.3 bits (90), Expect = 0.034
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 261 GRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCG 440
G++ + +T G+++++D G +E R D + S+ID V+I+HFH DH G
Sbjct: 33 GQATLFVTPKGESLLIDTGWP---GNEGRDADRIAAAAKSAGLSRIDYVLITHFHDDHVG 89
Query: 441 ALPYMSEMI 467
+P + E I
Sbjct: 90 GVPNLVEKI 98
>UniRef50_Q748A2 Cluster: Metallo-beta-lactamase family protein;
n=11; Proteobacteria|Rep: Metallo-beta-lactamase family
protein - Geobacter sulfurreducens
Length = 561
Score = 39.9 bits (89), Expect = 0.045
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 392
++I PLG ++G + + G I+ DCG+ + PD +Y+
Sbjct: 14 LRIIPLGGLGEIGLNMMAYEHGEDIIVADCGLMFPEPQMLGIDLVIPDITYLRERA---G 70
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMT 494
++ ++++H H DH GALPY+ + + P+Y T
Sbjct: 71 RVRGILLTHGHEDHIGALPYVLQELSL--PLYGT 102
>UniRef50_Q2SRM2 Cluster: Metallo-beta-lactamase superfamily
protein; n=4; Mollicutes|Rep: Metallo-beta-lactamase
superfamily protein - Mycoplasma capricolum subsp.
capricolum (strain California kid / ATCC27343 / NCTC
10154)
Length = 611
Score = 39.9 bits (89), Expect = 0.045
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +3
Query: 228 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITSQ 395
KI LG ++VG++ + + IM+D G+ + PD+SY+V +
Sbjct: 62 KIFALGGLEEVGKNTYCIEYDNELIMIDAGVKFPESTMLGVSAVIPDYSYLVEN---QKK 118
Query: 396 IDCVIISHFHLDHCGALPYMSEMI 467
I + I+H H DH G + Y+ + +
Sbjct: 119 IKALFITHGHEDHIGGIQYLVQQV 142
>UniRef50_Q50EJ8 Cluster: Metallo-beta-lactamase superfamily
hydrolase; n=45; Lactobacillales|Rep:
Metallo-beta-lactamase superfamily hydrolase -
Lactobacillus reuteri
Length = 593
Score = 39.9 bits (89), Expect = 0.045
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPIT 389
+IKI P G ++ G++ + + + +LD G+ N+ + PD+ Y+
Sbjct: 4 NIKIIPFGGVRENGKNMYAVEIEDQIFILDTGLKYPENELMGIDVVIPDWEYLREH---K 60
Query: 390 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
+I V ++H H D GALPY ++ + P++ + T A+A + ++
Sbjct: 61 DKIVGVFLTHGHADSIGALPYF--LMDFNVPVFGSEMTIALAKLAVK 105
>UniRef50_Q5V0H4 Cluster: MRNA 3'-end processing factor; n=4;
Halobacteriaceae|Rep: MRNA 3'-end processing factor -
Haloarcula marismortui (Halobacterium marismortui)
Length = 411
Score = 39.9 bits (89), Expect = 0.045
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPI-TSQIDCVIIS 416
LG ++GRS +L+ ++++LD GM + P+ P+ T D V++S
Sbjct: 6 LGGADEIGRSAVLID---ESLLLDFGM------------LTDSPPQFPVRTPSPDAVVVS 50
Query: 417 HFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 524
H HLDH G +P + PI+ T PT +A L
Sbjct: 51 HGHLDHVGTIPALVSG-DARPPIHWTPPTYELAMTL 85
>UniRef50_A7D2T2 Cluster: Beta-lactamase domain protein; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Beta-lactamase
domain protein - Halorubrum lacusprofundi ATCC 49239
Length = 414
Score = 39.9 bits (89), Expect = 0.045
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
LG ++VGRS +L+ +++D G+ D ++P PE D V++SH
Sbjct: 6 LGGAREVGRSAVLVDDA---LLIDYGLLTA--DPPQYPLRD---PEP------DAVVVSH 51
Query: 420 FHLDHCGALPYMSEMIGYTGP-IYMTHPTKAIAPIL 524
HLDH GA+P + + G P I+ T PT AIA +L
Sbjct: 52 GHLDHVGAVPAL--LKGDRRPTIHWTPPTAAIARVL 85
>UniRef50_Q02AY2 Cluster: Beta-lactamase domain protein; n=2;
Bacteria|Rep: Beta-lactamase domain protein - Solibacter
usitatus (strain Ellin6076)
Length = 415
Score = 39.5 bits (88), Expect = 0.059
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCI-LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEG-PIT 389
M ++++T A +G +C+ + T G I+LD G + R ++P+ I
Sbjct: 1 MNEVRLTVHRATHQIGGNCVEISTEDGHRIILDVGRPLDAPQSARG-----LLPKSLDIG 55
Query: 390 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
S ID V+ISH H DH G L E + PIY PT
Sbjct: 56 SPIDGVLISHPHQDHYGVL----EDVPADWPIYPGEPT 89
>UniRef50_A7AAI5 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Parabacteroides merdae ATCC 43184
Length = 261
Score = 39.5 bits (88), Expect = 0.059
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +3
Query: 264 RSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGA 443
R+ +L+ GK I+LDCG PDF + V T ++D V+ISH H DH G
Sbjct: 35 RTSVLVETDGKRILLDCG-----------PDFRWQVIRNK-TYRLDAVLISHEHYDHVGG 82
Query: 444 L 446
L
Sbjct: 83 L 83
>UniRef50_Q3LWF4 Cluster: Ysh1 3' mRNA end processing factor; n=1;
Bigelowiella natans|Rep: Ysh1 3' mRNA end processing
factor - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 544
Score = 39.5 bits (88), Expect = 0.059
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+KI LG +G SCI + + +LD G+ +++ IT ++
Sbjct: 7 VKILQLGGTFQIGNSCIYVMIKNTIFILDIGIIRSDKYWMHLESINFLKK---ITKPLN- 62
Query: 405 VIISHFHLDHCGALP 449
+ISH+HLDH G+LP
Sbjct: 63 FLISHYHLDHIGSLP 77
>UniRef50_A6NRM5 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 768
Score = 39.1 bits (87), Expect = 0.078
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+ +T L GQ G+S ILLT G ++DCG G D+ Y+ G S +D
Sbjct: 529 LSVTVLDVGQ--GQS-ILLTAQGSTALVDCGGSGG--DDPGDIAADYVQAMG--RSTLDL 581
Query: 405 VIISHFHLDHCGALPYMSEMI 467
++++H+H DH +P + E +
Sbjct: 582 LVLTHYHSDHACGVPELMERL 602
>UniRef50_Q024Z8 Cluster: Beta-lactamase domain protein precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Beta-lactamase
domain protein precursor - Solibacter usitatus (strain
Ellin6076)
Length = 269
Score = 38.7 bits (86), Expect = 0.10
Identities = 27/93 (29%), Positives = 42/93 (45%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K L +G G + +L T + I++D G+ M +R + G ID
Sbjct: 12 VKFCVLASGSS-GNAALLATENTR-ILVDAGLSMRELRKR-------LALIGETLESIDA 62
Query: 405 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
+I++H H DH LP ++ G IYMT T
Sbjct: 63 IIVTHEHSDHVSGLPVLARAKGLRAVIYMTRLT 95
>UniRef50_Q8TVW4 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=1; Methanopyrus
kandleri|Rep: Predicted hydrolase of the
metallo-beta-lactamase superfamily - Methanopyrus
kandleri
Length = 334
Score = 38.7 bits (86), Expect = 0.10
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 312 CGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALP 449
CG+ + Y D R F D + +GP + D VI++H H DH G +P
Sbjct: 10 CGVVVDYGDTRVFVDVTD--RKGPYVKRADAVIVTHPHRDHYGGVP 53
>UniRef50_Q58271 Cluster: UPF0036 protein MJ0861; n=15; Archaea|Rep:
UPF0036 protein MJ0861 - Methanococcus jannaschii
Length = 448
Score = 38.7 bits (86), Expect = 0.10
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSY----------IVP 374
++I +G ++VGR+ + + G+ I+LD G+ + D S I+P
Sbjct: 3 LEIIAIGGYEEVGRNMTAVNVDGEIIILDMGIRLDRVLIHEDTDISKLHSLELIEKGIIP 62
Query: 375 EGPITSQID----CVIISHFHLDHCGALPYMSEMIGYTGPIYMT 494
+ I+ +++SH HLDH GA+P ++ Y PI T
Sbjct: 63 NDTVMKNIEGEVKAIVLSHGHLDHIGAVPKLAHR--YNAPIIGT 104
>UniRef50_Q82SI4 Cluster: Metallo-beta-lactamase superfamily; n=4;
Proteobacteria|Rep: Metallo-beta-lactamase superfamily -
Nitrosomonas europaea
Length = 333
Score = 38.3 bits (85), Expect = 0.14
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Frame = +3
Query: 261 GRSCI-LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHC 437
GR+ I L+T G K ++D G I PE QID + ++H HLDH
Sbjct: 32 GRAAIHLITEGDKAALVDTGTRFSVPGTMAALAHKQITPE-----QIDYIFLTHIHLDHA 86
Query: 438 GA-------LPYMSEMIGYTGPIYMTHPTKAIAPIL 524
G LP ++ G +M +P K IA ++
Sbjct: 87 GGASEFMKWLPNARLVVHPRGASHMANPIKLIAGVM 122
>UniRef50_Q6F968 Cluster: Competence factor involved in DNA uptake;
n=2; Acinetobacter|Rep: Competence factor involved in
DNA uptake - Acinetobacter sp. (strain ADP1)
Length = 792
Score = 38.3 bits (85), Expect = 0.14
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +3
Query: 204 VKLIMPDIKITPLGAG-QDVGRS-CILLTMGGKNIMLDCGMHMGYNDERRFP-DFSYIVP 374
V L++P I P DVG+ I + + I+LD G GY DE +F +VP
Sbjct: 522 VPLLIPSKMIRPTQISILDVGQGQSIFIQDQTQRILLDTG---GYYDESKFSIGKQVVVP 578
Query: 375 --EGPITSQIDCVIISHFHLDHCGALPYMSEMI 467
+ Q+D VI++H DH G LP + ++I
Sbjct: 579 FLKSQGVHQLDRVILTHLDQDHSGGLPAVLQLI 611
>UniRef50_Q6L0H4 Cluster: MRNA 3'-end processing factor; n=4;
Thermoplasmatales|Rep: MRNA 3'-end processing factor -
Picrophilus torridus
Length = 405
Score = 38.3 bits (85), Expect = 0.14
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
+G ++VGR I + IM+D G+ E Y +P P+ + I+H
Sbjct: 1 MGGAEEVGRLAIKIEDKNDKIMIDYGVEPDKPPE-------YPLPPEPVND----IFITH 49
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPT-KAIAPIL 524
HLDH GALP Y+ ++ T T ++ PI+
Sbjct: 50 AHLDHTGALPVYYH--NYSAKLHATAMTANSVVPII 83
>UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium
loti|Rep: Mll1963 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 315
Score = 37.9 bits (84), Expect = 0.18
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +3
Query: 273 ILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 446
++L MGGK IM+D G +G + + G ID ++ISHFH DH L
Sbjct: 91 VVLKMGGKLIMMDAGSGVGQWQANATHLPANMAAAGIDYKAIDTIMISHFHPDHVWGL 148
>UniRef50_Q97S10 Cluster: Metallo-beta-lactamase superfamily
protein; n=18; Streptococcaceae|Rep:
Metallo-beta-lactamase superfamily protein -
Streptococcus pneumoniae
Length = 553
Score = 37.9 bits (84), Expect = 0.18
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERR----FPDFSYIVPEGP 383
M +I +T LG ++ G++ + +G +L+ G+ N++ P+ Y+
Sbjct: 1 MSNISLTTLGGVRENGKNMYIAEIGESIFVLNVGLKYPENEQLGVDVVIPNMDYLFEN-- 58
Query: 384 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEG 533
+ +I V ++H H D GALPY+ + P++ + T +A + ++G
Sbjct: 59 -SDRIAGVFLTHGHADAIGALPYL--LAEAKVPVFGSELTIELAKLFVKG 105
>UniRef50_Q8YS71 Cluster: All3220 protein; n=10; Cyanobacteria|Rep:
All3220 protein - Anabaena sp. (strain PCC 7120)
Length = 555
Score = 37.9 bits (84), Expect = 0.18
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +3
Query: 270 CILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALP 449
C+L+ MG I+LDCG+ + ++ + V G S D V+++H H DH L
Sbjct: 35 CLLVRMGPHRILLDCGLADISSIQK---SLTPSVKRGNPPSPADLVLVTHAHPDHARGLL 91
Query: 450 YMSEMIGYTGPIYMTHPTKAIAPI 521
+ + PIY + T + P+
Sbjct: 92 ALHQAFPNL-PIYGSEVTSKLLPL 114
>UniRef50_Q4L6T9 Cluster: Similar to ComEC late competence protein
3; n=1; Staphylococcus haemolyticus JCSC1435|Rep:
Similar to ComEC late competence protein 3 -
Staphylococcus haemolyticus (strain JCSC1435)
Length = 726
Score = 37.9 bits (84), Expect = 0.18
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +3
Query: 213 IMPDIK-ITPLGAGQDVGRSCILLTMGGKNIMLDCG---MHMGYNDERRFPDFSYIVP-- 374
+ P++ IT GQ G S I T + +M+D G + +G D + +I+P
Sbjct: 462 VRPNVSTITFFDVGQ--GDSLIFQTTKQETVMVDTGGKEIKIGNIDNHNIAKY-HIMPTL 518
Query: 375 EGPITSQIDCVIISHFHLDHCGALPYMSEMI 467
+ ++ID +II+H H DH G LPY+++ I
Sbjct: 519 KQKRITKIDHLIITHPHADHIGELPYIAQHI 549
>UniRef50_A6CVL4 Cluster: Beta-lactamase-like protein; n=1; Vibrio
shilonii AK1|Rep: Beta-lactamase-like protein - Vibrio
shilonii AK1
Length = 542
Score = 37.9 bits (84), Expect = 0.18
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 378 GPITSQIDCVIISHFHLDHCGALPYMSEMIGYTG 479
G +++D + I+H H+DH G+LPY+ + G+ G
Sbjct: 166 GVALNELDKIFITHLHVDHFGSLPYLYQFGGWNG 199
>UniRef50_A0W430 Cluster: Beta-lactamase-like; n=1; Geobacter
lovleyi SZ|Rep: Beta-lactamase-like - Geobacter lovleyi
SZ
Length = 422
Score = 37.9 bits (84), Expect = 0.18
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 404
+K T ++G +CI ++ +I+LD G+ + N + + E + + D
Sbjct: 1 MKFTIHRGSHEIGGTCIRISTETISILLDAGLPLAANSQP--------LTEADLAA--DA 50
Query: 405 VIISHFHLDHCGALPYM-SEMIGYTGPI 485
+IISH H DHCG L + S M Y G +
Sbjct: 51 LIISHSHQDHCGLLDTIPSSMPVYIGKV 78
>UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 712
Score = 37.9 bits (84), Expect = 0.18
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 390 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 530
S ID ++IS++ + ALP+++E + G IY T PT I +LLE
Sbjct: 115 STIDMILISNY--TNIYALPFITEYTNFQGKIYATEPTVQIGKLLLE 159
>UniRef50_Q5KIP3 Cluster: Cleavage and polyadenylation specificity
factor subunit, putative; n=1; Filobasidiella
neoformans|Rep: Cleavage and polyadenylation specificity
factor subunit, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 899
Score = 37.9 bits (84), Expect = 0.18
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Frame = +3
Query: 225 IKITPLGAGQ-DVGRS---CILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 392
I +TPL A + S C LL + I+LD G Y + + Y +
Sbjct: 2 ITLTPLSASAAETSPSEPICYLLELDDARILLDMGQR-DYRASSQQCSWDYEEAVRDLAP 60
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
+ V++SH ++ PY G T P+Y T PT
Sbjct: 61 TLSLVLLSHSSSNYLSLYPYARARWGLTCPVYATQPT 97
>UniRef50_A1S008 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 295
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGGPGTQFAL 557
++D V++SH H DH G LP + E G+ P+ + HP + P + G +F++
Sbjct: 70 EVDAVVLSHRHYDHAGGLPALLEKAGFK-PV-VAHP-DVVKPSYADSGGFKRFSV 121
>UniRef50_Q9K9I5 Cluster: BH2662 protein; n=43; Bacteria|Rep: BH2662
protein - Bacillus halodurans
Length = 555
Score = 37.5 bits (83), Expect = 0.24
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITSQIDCV 407
LG ++G++ + + I++D G+ ++ + PD+SY+V ++I +
Sbjct: 14 LGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYLVKN---ENKIKGL 70
Query: 408 IISHFHLDHCGALPYMSEMIGYTGPIY 488
I+H H DH G +PY+ + PIY
Sbjct: 71 FITHGHEDHIGGIPYLLREVNI--PIY 95
>UniRef50_Q1ATH2 Cluster: Beta-lactamase-like protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep:
Beta-lactamase-like protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 271
Score = 37.5 bits (83), Expect = 0.24
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 390 SQIDCVIISHFHLDHCGALPY 452
S ID V+ISH HLDHCG L +
Sbjct: 98 SDIDIVVISHLHLDHCGCLDF 118
>UniRef50_A6TMT5 Cluster: Beta-lactamase domain protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Beta-lactamase
domain protein - Alkaliphilus metalliredigens QYMF
Length = 404
Score = 37.5 bits (83), Expect = 0.24
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 198 DVVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE 377
D + L +KI + GQ G + +++T GK I++D G + + SYI +
Sbjct: 112 DELNLSNEVLKIHFIDVGQ--GDATLIMTPAGKTILVDAG-----DRNQGETVVSYIKAQ 164
Query: 378 GPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYM---THPTKAIAPILL 527
G T ID +I SH H DH G + + ++ G +YM T TK +LL
Sbjct: 165 GIET--IDLLIASHPHADHIGGMASVVQVF-EIGEVYMPEVTANTKTFETLLL 214
>UniRef50_A7I6D7 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Beta-lactamase
domain protein - Methanoregula boonei (strain 6A8)
Length = 287
Score = 37.5 bits (83), Expect = 0.24
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +3
Query: 213 IMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 392
I P I G D GR + + G NI + + G+N + YI+ G S
Sbjct: 3 ITPHIHALKTPLGPDPGRFVHVYLIYGDNITV---IDTGFNGTEKLIT-EYILSTGRNPS 58
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYT 476
+I VI++H H DH G+ + ++ G T
Sbjct: 59 EIRLVILTHAHPDHTGSAKALRDLTGCT 86
>UniRef50_Q8DAV3 Cluster: Rec2-related protein; n=2; Vibrio
vulnificus|Rep: Rec2-related protein - Vibrio vulnificus
Length = 749
Score = 37.1 bits (82), Expect = 0.32
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +3
Query: 99 IVLIINTPRYLLANHFVSL-IFIILKRIFS*ASLDVVKLIMPDIKITPLGAGQDVGRSCI 275
+VL+ ++ HF+ + ++L + S +SL V L I + +G G +
Sbjct: 455 VVLVALCALAVMLRHFIRWQLSVVLIILLSISSLSVHSLSRTRIDVLDVGHGL-----AV 509
Query: 276 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYM 455
L+ GK ++ D G + ++ G + +D VIISH DH G LPY+
Sbjct: 510 LIEKDGKTLLYDTGKSWHGGSIAQQVIEPILLSRG--SRSLDGVIISHQDDDHAGGLPYL 567
Query: 456 SE 461
+
Sbjct: 568 QQ 569
>UniRef50_Q72BD6 Cluster: Metallo-beta-lactamase family protein;
n=1; Desulfovibrio vulgaris subsp. vulgaris str.
Hildenborough|Rep: Metallo-beta-lactamase family protein
- Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 415
Score = 37.1 bits (82), Expect = 0.32
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND-ERRFPDFSYIVPEGPITSQID 401
++IT Q++G SC+ L+ GG++I++D G + + E + D S+ +
Sbjct: 1 MEITIHRGTQEIGGSCVQLSSGGRSILIDAGSPLRESQCEVKLSDISF-----------E 49
Query: 402 CVIISHFHLDHCGAL 446
V++SH H DH G +
Sbjct: 50 AVLVSHPHQDHYGLI 64
>UniRef50_Q0EY53 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 552
Score = 37.1 bits (82), Expect = 0.32
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE----GPI 386
P ++ P G + G++ ++ + +++DCG MG+ + + +VP+ +
Sbjct: 4 PVLRCFPFGGVGEFGKNMMVYAVDDDAVIVDCG--MGFPEPGQH-GVDIVVPDIAALDEL 60
Query: 387 TSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAI 512
+I +I++H H DH G +P + + P+Y T T A+
Sbjct: 61 GLKIHALILTHGHEDHIGGVPILLPRLKL--PVYGTEVTLAL 100
>UniRef50_A5D4E8 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=1; Pelotomaculum
thermopropionicum SI|Rep: Predicted exonuclease of the
beta-lactamase fold - Pelotomaculum thermopropionicum SI
Length = 436
Score = 37.1 bits (82), Expect = 0.32
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Frame = +3
Query: 255 DVGRSCILLTMGGKNIMLDCGMHMGYNDERRF-------------------PDFSYIVPE 377
D+G SC+ L G I++D G+ + D+ RF PD +
Sbjct: 11 DIGGSCVELQSGDSRIIIDLGLPLAAKDDSRFDSSTLRLRTGAELVNSGILPDIRGLYAW 70
Query: 378 GPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAI 512
+ID + +SH H+DH G + ++S + P+Y T+ +
Sbjct: 71 DTECRRIDALFLSHAHIDHYGLVNFISPDV----PVYSGEATRRL 111
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 527 RGGARYPIRPIVSRIT 574
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_A2EZM9 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Trichomonas vaginalis G3|Rep:
Metallo-beta-lactamase superfamily protein - Trichomonas
vaginalis G3
Length = 268
Score = 37.1 bits (82), Expect = 0.32
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 RSC-ILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCG 440
R+C IL GKN+++DCG D R+ ++ EG + I+ +IISH H DH
Sbjct: 43 RTCGILKISNGKNVLIDCG-----TDIRKC-----LLREG--ITHIEGIIISHCHADHVH 90
Query: 441 ALPYMSEMI-GYTGPIY 488
LP + + G+ PIY
Sbjct: 91 GLPDLVKFYNGHPIPIY 107
>UniRef50_Q9HKD3 Cluster: Putative uncharacterized protein Ta0668;
n=2; Thermoplasma|Rep: Putative uncharacterized protein
Ta0668 - Thermoplasma acidophilum
Length = 322
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 393 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTH 497
+ID V I+H H+DH G + Y+ E G P YM H
Sbjct: 62 KIDFVFITHLHIDHLGGVLYLHEKYGI--PAYMNH 94
>UniRef50_Q18IK7 Cluster: Ribonuclease Z; n=1; Haloquadratum walsbyi
DSM 16790|Rep: Ribonuclease Z - Haloquadratum walsbyi
(strain DSM 16790)
Length = 304
Score = 37.1 bits (82), Expect = 0.32
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +3
Query: 261 GRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCG 440
G SCI L + G I+ DCG ++R ++ + +D V ISHFH DH
Sbjct: 18 GTSCIYLNVFGDKILFDCGE----GSQQRLMKYNS-------SPNVDAVFISHFHADHTL 66
Query: 441 ALP 449
LP
Sbjct: 67 GLP 69
>UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily
protein, putative; n=4; Mycoplasma|Rep:
Metallo-beta-lactamase superfamily protein, putative -
Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC27343 / NCTC 10154)
Length = 688
Score = 36.7 bits (81), Expect = 0.42
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +3
Query: 99 IVLIINTPRYLLANHFVSLIFIILKRIFS*ASLDVVKLIMPDIKITPLGAGQDVGRSCIL 278
I+L+I + ++SLIFI+L S + LI P + + L G +C +
Sbjct: 425 IILVIIKYNFKSIWSWISLIFILL------LSYLISWLIKPSVFLVMLNVGNG---NCFI 475
Query: 279 LTMGGKN--IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 446
KN I+ DCG+ G++ + Y + +D +IISH H DH A+
Sbjct: 476 FHDKFKNTTIINDCGVGKGFSKNIGYEFLKYFG-----INHVDLIIISHNHADHYNAI 528
>UniRef50_A6LS78 Cluster: Beta-lactamase domain protein precursor;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Beta-lactamase domain protein precursor - Clostridium
beijerinckii NCIMB 8052
Length = 293
Score = 36.7 bits (81), Expect = 0.42
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 255 DVGRS-CILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLD 431
DVG+ CIL+ + KN+++D G +D R+ F+Y+ G +++D VI +H H D
Sbjct: 52 DVGQGDCILVQVNNKNLLIDSGPK---SDRRKL--FNYL--SGLNLNKLDYVIATHPHED 104
Query: 432 HCG 440
H G
Sbjct: 105 HIG 107
>UniRef50_P54123 Cluster: UPF0036 protein slr0551; n=38;
Cyanobacteria|Rep: UPF0036 protein slr0551 -
Synechocystis sp. (strain PCC 6803)
Length = 640
Score = 36.7 bits (81), Expect = 0.42
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERR----FPDFSYIVPEGPITS 392
+KI PLG ++G++ + + ++LD G+ +D PD +Y+
Sbjct: 10 LKILPLGGLHEIGKNTCVFEYDDEILLLDAGLAFPTDDMHGVNVVLPDMTYLREN---RE 66
Query: 393 QIDCVIISHFHLDHCGALPY 452
+I ++++H H DH G + Y
Sbjct: 67 KIKGMVVTHGHEDHIGGIAY 86
>UniRef50_A7DE09 Cluster: Beta-lactamase domain protein; n=2;
Methylobacterium extorquens PA1|Rep: Beta-lactamase
domain protein - Methylobacterium extorquens PA1
Length = 293
Score = 36.3 bits (80), Expect = 0.55
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 288 GGKNIMLDCGM-HMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEM 464
G K +++D G H G + R P + + G +I+ V+++H H DH G L
Sbjct: 70 GRKPVLIDSGYGHFGPDTMGRVP--AALALAGVAPEEIETVLLTHLHPDHAGGLVKADGS 127
Query: 465 IGYTGPIYMTHPTKA 509
Y + H T+A
Sbjct: 128 AAYPNAELVVHATEA 142
>UniRef50_A6PKD4 Cluster: Beta-lactamase domain protein precursor;
n=1; Victivallis vadensis ATCC BAA-548|Rep:
Beta-lactamase domain protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 276
Score = 36.3 bits (80), Expect = 0.55
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 276 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 446
+L GGK I++D G N +R + +G +IDC++++H H DH G L
Sbjct: 72 VLKRGGKLILVDAG-----NGGKRGAMLRKLEQDGIPPEKIDCILLTHMHGDHIGGL 123
>UniRef50_A5IIH1 Cluster: Metal-dependent hydrolase of the
beta-lactamase superfamily III; n=4; Legionella
pneumophila|Rep: Metal-dependent hydrolase of the
beta-lactamase superfamily III - Legionella pneumophila
(strain Corby)
Length = 255
Score = 36.3 bits (80), Expect = 0.55
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Frame = +3
Query: 225 IKITPLGAGQD--VG----RSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPI 386
+KIT LG+G +G +S +LL + +++D G + Y+ R SY
Sbjct: 3 LKITFLGSGSSFAIGPENYQSNVLLELENDTLLIDAGTDIKYS--LRDQGLSY------- 53
Query: 387 TSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHP 500
I V ISH H DHCG L + + +I Y P + P
Sbjct: 54 -KDIKNVYISHLHYDHCGGLEWFA-LITYFDPNHSHKP 89
>UniRef50_Q9HLY7 Cluster: Putative uncharacterized protein Ta0086;
n=2; Thermoplasma|Rep: Putative uncharacterized protein
Ta0086 - Thermoplasma acidophilum
Length = 207
Score = 36.3 bits (80), Expect = 0.55
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +3
Query: 276 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYM 455
LLT+ GKNI++D G G ++ D Y G ++ D VI++H H DH G L +
Sbjct: 24 LLTLDGKNILIDTGTAGG---GKKIID--YFNKNG---TKPDYVIVTHHHADHVGGLKEI 75
Query: 456 SE 461
SE
Sbjct: 76 SE 77
>UniRef50_Q55470 Cluster: Uncharacterized protein sll0514; n=1;
Synechocystis sp. PCC 6803|Rep: Uncharacterized protein
sll0514 - Synechocystis sp. (strain PCC 6803)
Length = 554
Score = 36.3 bits (80), Expect = 0.55
Identities = 28/100 (28%), Positives = 43/100 (43%)
Frame = +3
Query: 222 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 401
+I P G G G C+ L +G I+LDCG+ D + ++ P T +D
Sbjct: 14 NISFLPYGVGPRDGGICLELHLGPYRILLDCGLE----------DLTPLLAADPGT--VD 61
Query: 402 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPI 521
V SH H DH L + + PI + T+ + P+
Sbjct: 62 LVFCSHAHRDHGLGLWQFHQQFPHI-PILASEVTQRLLPL 100
>UniRef50_UPI0000E0E5B0 Cluster: Beta-lactamase-like protein; n=1;
alpha proteobacterium HTCC2255|Rep: Beta-lactamase-like
protein - alpha proteobacterium HTCC2255
Length = 339
Score = 35.9 bits (79), Expect = 0.73
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 375 EGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGGPGT 545
+GPIT V+++H H DH G Y++E+ Y +YM+ A L G GT
Sbjct: 71 DGPITR----VLVTHMHPDHIGCAGYLTEL--YQVDLYMSQTEYYAARALFAGNQGT 121
>UniRef50_Q5SJ74 Cluster: Metallo-beta-lactamase superfamily
protein; n=3; Deinococci|Rep: Metallo-beta-lactamase
superfamily protein - Thermus thermophilus (strain HB8 /
ATCC 27634 / DSM 579)
Length = 573
Score = 35.9 bits (79), Expect = 0.73
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +3
Query: 225 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ--- 395
++I PLG ++G++ + + +LD G+ E P ++P +
Sbjct: 28 VEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAF---PEEGMPGVDLLIPRVDYLIEHRH 84
Query: 396 -IDCVIISHFHLDHCGALPYMSEMI-GYTGPI 485
I +++H H DH G LP++ MI G P+
Sbjct: 85 KIKAWVLTHGHEDHIGGLPFLLPMIFGKESPV 116
>UniRef50_Q2JNE4 Cluster: Metallo-beta-lactamase family protein;
n=2; Synechococcus|Rep: Metallo-beta-lactamase family
protein - Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 595
Score = 35.9 bits (79), Expect = 0.73
Identities = 31/106 (29%), Positives = 41/106 (38%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQI 398
P +++ PLG L +G ++LDCG+ P +P P
Sbjct: 6 PPLRLLPLGTDPRQQGCAYWLEIGSHRLLLDCGLPA--------PALFKALPGIP----- 52
Query: 399 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGG 536
D VI SH H DH LP P+Y T T +A L E G
Sbjct: 53 DAVICSHAHFDHVQGLPAFHRRYPQV-PLYATPVTAHLAAGLWECG 97
>UniRef50_Q1PWM3 Cluster: Similar to competence protein ComA; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
competence protein ComA - Candidatus Kuenenia
stuttgartiensis
Length = 829
Score = 35.9 bits (79), Expect = 0.73
Identities = 32/126 (25%), Positives = 56/126 (44%)
Frame = +3
Query: 84 LFL*NIVLIINTPRYLLANHFVSLIFIILKRIFS*ASLDVVKLIMPDIKITPLGAGQDVG 263
+F+ ++L R L+ H++ ++ L ++K +K+T L G G
Sbjct: 529 IFVYYLLLFFLLYRTYLSIHYLHIVLWGLISANVLTFSGIIKSRPHALKVTCLDVGH--G 586
Query: 264 RSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGA 443
+ + GKNI+ D G Y+ ++ ++ E +ID VI+SH H DH
Sbjct: 587 AALFIQFPNGKNILYDAGTWHNYDVGKQIVT-PFLWSEK--IKKIDLVILSHEHNDHWSG 643
Query: 444 LPYMSE 461
LP + E
Sbjct: 644 LPSIIE 649
>UniRef50_Q0LNU4 Cluster: Beta-lactamase-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-lactamase-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 391
Score = 35.9 bits (79), Expect = 0.73
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 294 KNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 446
K +M+DCG G++D+ + + +T+ ID VI++H DHC L
Sbjct: 27 KVVMIDCGSDRGFDDDLITSGRALLRNLIGVTNLIDTVILTHHDGDHCNQL 77
>UniRef50_A5CEC6 Cluster: Metallo-beta-lactamase family protein;
n=10; Rickettsieae|Rep: Metallo-beta-lactamase family
protein - Orientia tsutsugamushi (strain Boryong)
(Rickettsia tsutsugamushi)
Length = 578
Score = 35.9 bits (79), Expect = 0.73
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +3
Query: 210 LIMPD-IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN----DERRFPDFSYIVP 374
LI D + P+G ++G + + G+ IM+DCG + D S+I
Sbjct: 16 LIQTDKLVFIPIGGCNEIGMNVNIYHYQGEFIMVDCGAGFPSDFTPGANMLITDLSFIKA 75
Query: 375 EGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 503
G ++ +I++H H DH G + Y+ + + PIY T+ T
Sbjct: 76 SG---KKLAGLILTHAHEDHLGGVQYLLQDLDC--PIYTTNFT 113
>UniRef50_A4EC58 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 459
Score = 35.9 bits (79), Expect = 0.73
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 DVGRS-CILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLD 431
DVG++ IL+ GG ++DCG+ DER + +V ID V ++H+ D
Sbjct: 221 DVGQADAILIRQGGAVALVDCGL-----DERVV---AALVRNN--VHHIDAVFVTHWDED 270
Query: 432 HCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEGGPGTQF 551
H G LP + E G I + AP + PG ++
Sbjct: 271 HWGGLPAVLEQFS-VGTIAVAADALEDAPAEVLNRPGVEY 309
>UniRef50_A3ERL5 Cluster: Putative hydrolase of the
metallo-beta-lactamase superfamily; n=1; Leptospirillum
sp. Group II UBA|Rep: Putative hydrolase of the
metallo-beta-lactamase superfamily - Leptospirillum sp.
Group II UBA
Length = 562
Score = 35.9 bits (79), Expect = 0.73
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPI 386
P ++I PLG ++G + +++DCG+ +D + PD +++
Sbjct: 13 PWVRIIPLGGIGEIGMNMTAYETPDGIVVVDCGVLFPEDDLLGIDLIIPDMTFLKEN--- 69
Query: 387 TSQIDCVIISHFHLDHCGALPY 452
+++ + ++H H DH GA+PY
Sbjct: 70 RNRLLALFLTHGHEDHIGAIPY 91
>UniRef50_O29718 Cluster: MRNA 3'-end processing factor, putative;
n=1; Archaeoglobus fulgidus|Rep: MRNA 3'-end processing
factor, putative - Archaeoglobus fulgidus
Length = 407
Score = 35.9 bits (79), Expect = 0.73
Identities = 30/96 (31%), Positives = 48/96 (50%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 419
LG ++VGRS +++ IM+D G+ +D FP + + P VI+SH
Sbjct: 7 LGGCREVGRSAVMVD----GIMIDYGVKP--SDPPEFP-LNGLSPRA--------VILSH 51
Query: 420 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 527
HLDH G P ++ Y + +T P+ ++ ILL
Sbjct: 52 GHLDHIGVAP---NLMYYDPEVILTPPSHELSMILL 84
>UniRef50_Q0W6M0 Cluster: Metallo-beta-lactamase; n=3;
Euryarchaeota|Rep: Metallo-beta-lactamase - Uncultured
methanogenic archaeon RC-I
Length = 445
Score = 35.9 bits (79), Expect = 0.73
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Frame = +3
Query: 216 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG---YNDERRFPDFSYI------ 368
M D+ I +G ++VGR+ + +G + +++D G+ + +++ + +
Sbjct: 1 MKDVGIIAVGGYEEVGRNMTAIRVGKEIVIMDMGVRLDRIQIHEDTEMENMHSLDLIQMG 60
Query: 369 -VPEGPITSQIDC----VIISHFHLDHCGALPYMSEMIGYTGPIYMT 494
+P+ I +D ++ +H HLDH GA+P ++ Y PI T
Sbjct: 61 AIPDDKILKNVDGNVVGIVCTHGHLDHIGAVPKLAHR--YKCPIIGT 105
>UniRef50_A4YGQ9 Cluster: Beta-lactamase domain protein; n=3;
Sulfolobaceae|Rep: Beta-lactamase domain protein -
Metallosphaera sedula DSM 5348
Length = 259
Score = 35.9 bits (79), Expect = 0.73
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +3
Query: 369 VPEGPITSQIDCVIISHFHLDHCGALP-----YMSEMIGYTG-PIYMTHPTK 506
V + ++D V+++H H+DH GAL Y S++I Y G Y+ PTK
Sbjct: 40 VMDASFLDKLDYVVVTHLHIDHVGALSEIVQRYKSKVIVYQGYSKYLRDPTK 91
>UniRef50_Q45493 Cluster: UPF0036 protein ykqC; n=110; Bacilli|Rep:
UPF0036 protein ykqC - Bacillus subtilis
Length = 555
Score = 35.9 bits (79), Expect = 0.73
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 240 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITSQIDCV 407
LG ++G++ + + +++D G+ ++ + PD++Y+V +I +
Sbjct: 14 LGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKN---EDKIKGL 70
Query: 408 IISHFHLDHCGALPYMSEMIGYTGPIY 488
I+H H DH G +PY+ + P+Y
Sbjct: 71 FITHGHEDHIGGIPYLLRQVNI--PVY 95
>UniRef50_UPI00015B9771 Cluster: UPI00015B9771 related cluster; n=1;
unknown|Rep: UPI00015B9771 UniRef100 entry - unknown
Length = 416
Score = 35.5 bits (78), Expect = 0.97
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +3
Query: 252 QDVGRSCILLTMGGKNIMLDCGMHM--GYNDERRFPDFSYIVPEGPITSQIDCVIISHFH 425
+++G +C+ L GG ++LD G+ + +D R P + + G + + +++SH H
Sbjct: 10 REIGGTCVELEHGGARLLLDLGLPLDGDPDDTSRHPAINGLTGGGDLLA----LVLSHGH 65
Query: 426 LDHCGALPYMSEMIGYTGPIYMTHPTKAI 512
DH G +S + G P+ M T I
Sbjct: 66 RDHVG----LSHLAGPDLPVAMGTATLRI 90
>UniRef50_A0VNF9 Cluster: Beta-lactamase domain protein; n=7;
Rhodobacterales|Rep: Beta-lactamase domain protein -
Dinoroseobacter shibae DFL 12
Length = 266
Score = 35.5 bits (78), Expect = 0.97
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +3
Query: 276 LLTMGGKNIMLDCGMHMGYNDERRFP----DFSYIVPEGPITSQIDCVIISHFHLDHCGA 443
LL G + I++D G M + R P + P G I+ VI++H H DH G
Sbjct: 42 LLRRGPETILVDTGYDMDEGERRARPIRTDPAEALAPLGVSPDSIEQVIVTHLHYDHAGG 101
Query: 444 L 446
L
Sbjct: 102 L 102
>UniRef50_Q387M8 Cluster: Cleavage and polyadenylation specificity
factor, putative; n=2; Trypanosoma|Rep: Cleavage and
polyadenylation specificity factor, putative -
Trypanosoma brucei
Length = 818
Score = 35.5 bits (78), Expect = 0.97
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +3
Query: 276 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYM 455
LL + G I++DCG + G+ + SY+ P + V+ S L CGALP++
Sbjct: 32 LLEIDGVRILMDCGWNDGF-------ETSYLDALLPYLGDLHAVLFSTPELSSCGALPFV 84
Query: 456 SEMI 467
E I
Sbjct: 85 MEHI 88
>UniRef50_Q4PAM2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 979
Score = 35.5 bits (78), Expect = 0.97
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 384 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPI 521
+ S ID V++SH LDH G Y +G +Y T P +++ +
Sbjct: 123 LASTIDLVLLSHSSLDHLGLYAYAHANLGLRCQVYATMPVQSMGKL 168
>UniRef50_UPI0000164CFE Cluster: hypothetical protein DR_2417m; n=1;
Deinococcus radiodurans R1|Rep: hypothetical protein
DR_2417m - Deinococcus radiodurans R1
Length = 579
Score = 35.1 bits (77), Expect = 1.3
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +3
Query: 219 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRF----PDFSYIVPEGPI 386
P +++ PLG ++G++ + G + +++D G+ + P Y++
Sbjct: 17 PTLEVIPLGGMGEIGKNITVFRYGDEIVVVDGGLAFPKAHQMGIDLIVPRIDYLLEH--- 73
Query: 387 TSQIDCVIISHFHLDHCGALPYM 455
+I I++H H DH G LPY+
Sbjct: 74 QDKIKGWILTHGHEDHIGGLPYI 96
>UniRef50_Q9K890 Cluster: BH3116 protein; n=19; Bacillaceae|Rep:
BH3116 protein - Bacillus halodurans
Length = 305
Score = 35.1 bits (77), Expect = 1.3
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 258 VGRSCILLTMGGKNIMLD--CGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLD 431
+G S LL M G NI+ D ++G++ P S + E P +ID V+ISH H D
Sbjct: 61 IGHSSFLLQMKGLNILTDPVFAKYLGFSKRLISPGLS--IDELP---EIDIVVISHGHYD 115
Query: 432 H 434
H
Sbjct: 116 H 116
>UniRef50_Q0LFP8 Cluster: Beta-lactamase-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-lactamase-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 216
Score = 35.1 bits (77), Expect = 1.3
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 267 SCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 446
+C LL +++D GM ++ F + G SQI +I++H+H DH G
Sbjct: 24 NCYLLKADHGWVVIDTGMRYAQAEQTWQATFEQL---GIAWSQIKQIIVTHYHPDHYGMA 80
Query: 447 PYMSEMIG 470
+M+E G
Sbjct: 81 GWMAERSG 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,323,622
Number of Sequences: 1657284
Number of extensions: 13687828
Number of successful extensions: 29124
Number of sequences better than 10.0: 345
Number of HSP's better than 10.0 without gapping: 28156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28895
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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