Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1649
         (391 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    28   0.14 
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    23   3.9  
EF519475-2|ABP73560.1|  177|Anopheles gambiae CTL4 protein.            22   6.9  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           22   6.9  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     22   6.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   6.9  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    22   6.9  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    22   9.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   9.1  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.9 bits (59), Expect = 0.14
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -3

Query: 359 PNPQHEGVSRGLPGPVGQGEHADSFSVARVRPRTSKGITD 240
           P PQ +   RGLPGP  QGE  D      + P+  KG  D
Sbjct: 614 PGPQGQ---RGLPGP--QGEKGDQGPPGFIGPKGDKGERD 648


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 77  ICLVNSGNERDSSLLNRRRYLG 142
           ICL+ + +  D+S LN++ + G
Sbjct: 44  ICLIQNESRYDTSALNKKNWNG 65


>EF519475-2|ABP73560.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = +1

Query: 265 GRTRATLKESACSPWPTG--PGNPRETPSC 348
           G T   +KESA   W  G  P N R  PSC
Sbjct: 124 GLTDQEVKESA--EWADGVAPANNRVEPSC 151


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 351 PARRSFTRVARACRPGRTC*FLQC 280
           P ++S TR  R CR   TC    C
Sbjct: 133 PKQQSTTRPLRKCRNKSTCELDHC 156


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 351 PARRSFTRVARACRPGRTC*FLQC 280
           P ++S TR  R CR   TC    C
Sbjct: 134 PKQQSTTRPLRKCRNKSTCELDHC 157


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 374 GIIANPNPQHEGVSRGLPGPVGQ 306
           G+   P PQ E   RG PG  G+
Sbjct: 235 GLEGLPGPQGEVGPRGFPGRPGE 257



 Score = 21.8 bits (44), Expect = 9.1
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 374 GIIANPNPQHEGVSRGLPGPVGQGEHADSFSVARVRP 264
           G+   P P+ E    G PGP G+        + +++P
Sbjct: 625 GLRGEPGPKGEPGLLGPPGPSGEPGRDAEIPMDQLKP 661


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 367 LQTPIPSTKEFHAG 326
           LQTPIP+  + H G
Sbjct: 690 LQTPIPNNGDVHQG 703


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 241 TCYCSISCGSKTPVPLRRIL 182
           T +  + C SKTPVPLR  L
Sbjct: 403 TSFRFVRC-SKTPVPLRYAL 421


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 287 RNQHVLPGLQARATRVKLLRAGDW 358
           R +H+L G+      V +L  G+W
Sbjct: 423 RREHLLAGIDEFLDAVTVLPPGEW 446


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,998
Number of Sequences: 2352
Number of extensions: 8174
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)