Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1649
(391 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 30 3.1
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 30 3.1
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 30 3.1
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 30 3.1
J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein. 30 3.1
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 30 3.1
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 30 3.1
BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein. 30 3.1
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 30 3.1
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 30 3.1
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 30 3.1
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 30 3.1
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 30 3.1
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 30 3.1
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 30 3.1
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 30 3.1
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 30 3.1
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 30 3.1
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ... 29 4.0
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ... 29 4.0
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ... 29 4.0
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein. 29 4.0
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein. 29 4.0
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein. 29 4.0
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein. 29 4.0
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein. 29 4.0
X84753-1|CAA59234.1| 701|Homo sapiens luteinising hormone-chori... 29 7.1
S57793-1|AAB19917.2| 699|Homo sapiens luteinizing hormone recep... 29 7.1
M63108-1|AAA59515.1| 699|Homo sapiens luteinizing hormone-chori... 29 7.1
AC087816-1|AAX88979.1| 226|Homo sapiens unknown protein. 29 7.1
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 29 7.1
AK130753-1|BAC85422.1| 201|Homo sapiens protein ( Homo sapiens ... 28 9.3
AJ003125-1|CAA05880.1| 1211|Homo sapiens procollagen I N-protein... 28 9.3
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1306 PGLIGLIGPPGEQGEKGDRGLPGPQG 1331
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1327 PGLIGLIGPPGEQGEKGDRGLPGPQG 1352
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1413 PGLIGLIGPPGEQGEKGDRGLPGPQG 1438
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1485 PGLIGLIGPPGEQGEKGDRGLPGPQG 1510
>J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein.
Length = 961
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 684 PGLIGLIGPPGEQGEKGDRGLPGPQG 709
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1485 PGLIGLIGPPGEQGEKGDRGLPGPQG 1510
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1299 PGLIGLIGPPGEQGEKGDRGLPGPQG 1324
>BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein.
Length = 591
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 238 PGLIGLIGPPGEQGEKGDRGLPGPQG 263
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1327 PGLIGLIGPPGEQGEKGDRGLPGPQG 1352
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1327 PGLIGLIGPPGEQGEKGDRGLPGPQG 1352
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1327 PGLIGLIGPPGEQGEKGDRGLPGPQG 1352
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1327 PGLIGLIGPPGEQGEKGDRGLPGPQG 1352
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1485 PGLIGLIGPPGEQGEKGDRGLPGPQG 1510
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1485 PGLIGLIGPPGEQGEKGDRGLPGPQG 1510
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1485 PGLIGLIGPPGEQGEKGDRGLPGPQG 1510
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1413 PGLIGLIGPPGEQGEKGDRGLPGPQG 1438
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1327 PGLIGLIGPPGEQGEKGDRGLPGPQG 1352
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 386 PRLWGIIANPNPQHEGVSRGLPGPVG 309
P L G+I P Q E RGLPGP G
Sbjct: 1439 PGLIGLIGPPGEQGEKGDRGLPGPQG 1464
>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 3 protein.
Length = 2809
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 373 G*LQTPIPSTKEFHAGC-PG---L*ARENMLIPSV*RACGPGHLRASQTCYCS 227
G LQ P FHA C PG R ++P RACG G C C+
Sbjct: 52 GILQGPNVCGSRFHAYCCPGWRTFPGRSQCVVPICRRACGEGFCSQPNLCTCA 104
>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 2 protein.
Length = 2809
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 373 G*LQTPIPSTKEFHAGC-PG---L*ARENMLIPSV*RACGPGHLRASQTCYCS 227
G LQ P FHA C PG R ++P RACG G C C+
Sbjct: 52 GILQGPNVCGSRFHAYCCPGWRTFPGRSQCVVPICRRACGEGFCSQPNLCTCA 104
>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 1 protein.
Length = 2809
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 373 G*LQTPIPSTKEFHAGC-PG---L*ARENMLIPSV*RACGPGHLRASQTCYCS 227
G LQ P FHA C PG R ++P RACG G C C+
Sbjct: 52 GILQGPNVCGSRFHAYCCPGWRTFPGRSQCVVPICRRACGEGFCSQPNLCTCA 104
>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 373 G*LQTPIPSTKEFHAGC-PG---L*ARENMLIPSV*RACGPGHLRASQTCYCS 227
G LQ P FHA C PG R ++P RACG G C C+
Sbjct: 52 GILQGPNVCGSRFHAYCCPGWRTFPGRSQCVVPICRRACGEGFCSQPNLCTCA 104
>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 373 G*LQTPIPSTKEFHAGC-PG---L*ARENMLIPSV*RACGPGHLRASQTCYCS 227
G LQ P FHA C PG R ++P RACG G C C+
Sbjct: 52 GILQGPNVCGSRFHAYCCPGWRTFPGRSQCVVPICRRACGEGFCSQPNLCTCA 104
>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 373 G*LQTPIPSTKEFHAGC-PG---L*ARENMLIPSV*RACGPGHLRASQTCYCS 227
G LQ P FHA C PG R ++P RACG G C C+
Sbjct: 52 GILQGPNVCGSRFHAYCCPGWRTFPGRSQCVVPICRRACGEGFCSQPNLCTCA 104
>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 373 G*LQTPIPSTKEFHAGC-PG---L*ARENMLIPSV*RACGPGHLRASQTCYCS 227
G LQ P FHA C PG R ++P RACG G C C+
Sbjct: 52 GILQGPNVCGSRFHAYCCPGWRTFPGRSQCVVPICRRACGEGFCSQPNLCTCA 104
>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
Length = 2816
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 373 G*LQTPIPSTKEFHAGC-PG---L*ARENMLIPSV*RACGPGHLRASQTCYCS 227
G LQ P FHA C PG R ++P RACG G C C+
Sbjct: 59 GILQGPNVCGSRFHAYCCPGWRTFPGRSQCVVPICRRACGEGFCSQPNLCTCA 111
>X84753-1|CAA59234.1| 701|Homo sapiens luteinising
hormone-choriogonadotropin receptor protein.
Length = 701
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 249 ALRCPGPHARYTEGISMFSLAYRP 320
ALRCPGP T G++ SLAY P
Sbjct: 43 ALRCPGP----TAGLTRLSLAYLP 62
>S57793-1|AAB19917.2| 699|Homo sapiens luteinizing hormone receptor
protein.
Length = 699
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 249 ALRCPGPHARYTEGISMFSLAYRP 320
ALRCPGP T G++ SLAY P
Sbjct: 41 ALRCPGP----TAGLTRLSLAYLP 60
>M63108-1|AAA59515.1| 699|Homo sapiens luteinizing
hormone-choriogonadrotropin receptor protein.
Length = 699
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 249 ALRCPGPHARYTEGISMFSLAYRP 320
ALRCPGP T G++ SLAY P
Sbjct: 41 ALRCPGP----TAGLTRLSLAYLP 60
>AC087816-1|AAX88979.1| 226|Homo sapiens unknown protein.
Length = 226
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 249 ALRCPGPHARYTEGISMFSLAYRP 320
ALRCPGP T G++ SLAY P
Sbjct: 41 ALRCPGP----TAGLTRLSLAYLP 60
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 292 SACSPWPTGPGNPRETPSC 348
SAC PW TGP +P PSC
Sbjct: 1102 SACRPWRTGPRSP---PSC 1117
>AK130753-1|BAC85422.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ27243 fis, clone SYN08134. ).
Length = 201
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 259 HLRASQTCYCSISCGSKTPVPLRRI 185
HLRA T C + C S++PV LR +
Sbjct: 111 HLRAGVTLRCVLLCVSESPVGLRSV 135
>AJ003125-1|CAA05880.1| 1211|Homo sapiens procollagen I N-proteinase
protein.
Length = 1211
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Frame = -1
Query: 289 PSV*RACG----PGHLRASQTCYCSISCGSKT---PVPLR 191
P RAC PG RA CS++CG+ T PVP R
Sbjct: 964 PESRRACSRELCPGRWRAGPWSQCSVTCGNGTQERPVPCR 1003
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,330,937
Number of Sequences: 237096
Number of extensions: 1301849
Number of successful extensions: 3529
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3525
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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