Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1649
         (391 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA...    31   0.71 
AY071167-1|AAL48789.1|  286|Drosophila melanogaster RE21371p pro...    30   1.2  
AE013599-1622|AAM68621.1|  286|Drosophila melanogaster CG3884-PB...    30   1.2  
AY095097-1|AAM11425.1|  351|Drosophila melanogaster SD04590p pro...    28   3.8  
BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro...    28   5.0  
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ...    28   5.0  
AY071214-1|AAL48836.1|  413|Drosophila melanogaster RE25913p pro...    27   6.6  
AE013599-2597|AAN16135.1|  623|Drosophila melanogaster CG10910-P...    27   6.6  

>AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA,
           isoform A protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 83  DKSLHQLRTAMHHHPPNQE 27
           ++ +H L TAM HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229


>AY071167-1|AAL48789.1|  286|Drosophila melanogaster RE21371p
           protein.
          Length = 286

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 359 PNPQHEGVSR-GLPGPVGQGEHADSFSVARVRP 264
           PN    G +R G P  VG+G HA S +V +V P
Sbjct: 87  PNAVRSGTTRTGEPLYVGRGHHAGSLTVGKVHP 119


>AE013599-1622|AAM68621.1|  286|Drosophila melanogaster CG3884-PB,
           isoform B protein.
          Length = 286

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 359 PNPQHEGVSR-GLPGPVGQGEHADSFSVARVRP 264
           PN    G +R G P  VG+G HA S +V +V P
Sbjct: 87  PNAVRSGTTRTGEPLYVGRGHHAGSLTVGKVHP 119


>AY095097-1|AAM11425.1|  351|Drosophila melanogaster SD04590p
           protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 365 ANPNPQHEGVSRGLPGPVGQGEHADSF 285
           A P P+H G   G+ G VG+G    +F
Sbjct: 216 AGPQPEHNGAVFGVSGGVGEGSMRGAF 242


>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p protein.
          Length = 1870

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 365  ANPNPQHEGVSRGLPGPVGQGEHADSF 285
            A P P+H G   G+ G VG+G    +F
Sbjct: 1735 AGPQPEHNGAVFGVSGGVGEGSLRGAF 1761


>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
            protein.
          Length = 1711

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 365  ANPNPQHEGVSRGLPGPVGQGEHADSF 285
            A P P+H G   G+ G VG+G    +F
Sbjct: 1576 AGPQPEHNGAVFGVSGGVGEGSLRGAF 1602


>AY071214-1|AAL48836.1|  413|Drosophila melanogaster RE25913p
           protein.
          Length = 413

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 212 EDAGPSKKNFNTSSVSCATRGRAHLNNDAYL 120
           +DA  +K+NF    V+CA R   H N   Y+
Sbjct: 98  QDAVYTKRNFERELVTCALRESHHDNRQCYV 128


>AE013599-2597|AAN16135.1|  623|Drosophila melanogaster CG10910-PB
           protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 212 EDAGPSKKNFNTSSVSCATRGRAHLNNDAYL 120
           +DA  +K+NF    V+CA R   H N   Y+
Sbjct: 98  QDAVYTKRNFERELVTCALRESHHDNRQCYV 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,065,436
Number of Sequences: 53049
Number of extensions: 386916
Number of successful extensions: 1067
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)