Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1645
         (461 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   9.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   9.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   9.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 376 VSDSFLVAYTCRSRDTASALSPTPL 450
           +S  F  + T  +  T+SAL+ TPL
Sbjct: 2   ISSKFSPSTTTTTTTTSSALNSTPL 26


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 376 VSDSFLVAYTCRSRDTASALSPTPL 450
           +S  F  + T  +  T+SAL+ TPL
Sbjct: 2   ISSKFSPSTTTTTTTTSSALNSTPL 26


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 350 LQRDPEKRHSASQLLNH 300
           L+R  +K H  SQLL H
Sbjct: 351 LKRKRQKYHDPSQLLRH 367


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 94  FYICIYYFH 120
           F +CIYYF+
Sbjct: 142 FLLCIYYFY 150



 Score = 21.0 bits (42), Expect = 5.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 94  FYICIYYFH 120
           F +CIYYF+
Sbjct: 281 FLLCIYYFY 289



 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 94  FYICIYYF 117
           F +CIYYF
Sbjct: 129 FLLCIYYF 136


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 349 SVTSVSWWKV 378
           SVTS +WW V
Sbjct: 183 SVTSNAWWDV 192


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 369 VEGLRQLPRRVHLP 410
           +EGLR  PR+   P
Sbjct: 52  IEGLRDCPRKYSTP 65


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 369 VEGLRQLPRRVHLP 410
           +EGLR  PR+   P
Sbjct: 48  IEGLRDCPRKYSTP 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,739
Number of Sequences: 336
Number of extensions: 1796
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)