Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1645
(461 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4994| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043) 41 4e-04
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 41 4e-04
SB_42884| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_42734| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_18671| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_36256| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 40 0.001
SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087) 39 0.002
SB_55896| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_54935| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_51325| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_44994| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_43938| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_42082| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87) 39 0.002
SB_39914| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_35514| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_30147| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_29872| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_26655| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_25292| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06) 39 0.002
SB_21491| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_16601| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_15561| Best HMM Match : Protamine_P2 (HMM E-Value=8.8) 39 0.002
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 39 0.002
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 39 0.002
SB_9600| Best HMM Match : DUF1596 (HMM E-Value=9.6) 39 0.002
SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_8545| Best HMM Match : C2 (HMM E-Value=0.00073) 39 0.002
SB_8047| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4) 39 0.002
SB_967| Best HMM Match : Calx-beta (HMM E-Value=2.8) 39 0.002
SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_56708| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_46352| Best HMM Match : L71 (HMM E-Value=0.19) 39 0.002
SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_45526| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_39283| Best HMM Match : ADK (HMM E-Value=3.7) 39 0.002
SB_38562| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_18780| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 39 0.002
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_12642| Best HMM Match : Pkinase (HMM E-Value=5.3e-07) 39 0.002
SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.087
SB_22253| Best HMM Match : Pkinase (HMM E-Value=0) 31 0.46
SB_53349| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_27803| Best HMM Match : Pkinase (HMM E-Value=2.1e-08) 30 1.1
SB_31629| Best HMM Match : DEAD (HMM E-Value=1.2e-05) 29 1.4
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 29 1.9
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_45| Best HMM Match : Pkinase (HMM E-Value=0) 29 1.9
SB_3739| Best HMM Match : Pkinase (HMM E-Value=0) 29 2.5
SB_29154| Best HMM Match : RNA_pol_Rpb2_7 (HMM E-Value=2.3) 28 3.3
SB_19218| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_44471| Best HMM Match : TFIIF_beta (HMM E-Value=1.3) 28 3.3
SB_27902| Best HMM Match : RNA_pol_Rpb2_7 (HMM E-Value=2.3) 28 3.3
SB_46308| Best HMM Match : IMS (HMM E-Value=0) 28 4.3
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 28 4.3
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 27 5.7
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_46641| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_47948| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_1273| Best HMM Match : polyprenyl_synt (HMM E-Value=3.64338e-44) 27 7.6
SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0) 27 10.0
SB_54290| Best HMM Match : Pkinase (HMM E-Value=1.3e-26) 27 10.0
SB_45328| Best HMM Match : DUF1162 (HMM E-Value=6.1e-09) 27 10.0
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 27 10.0
>SB_4994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAAD 90
AVAAALELVDPPGCRNS AAD
Sbjct: 8 AVAAALELVDPPGCRNSIAAD 28
>SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAADPFY 99
AVAAALELVDPPGCRNS D Y
Sbjct: 8 AVAAALELVDPPGCRNSITKDKMY 31
>SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043)
Length = 205
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAADPFY 99
AVAAALELVDPPGCRNS A+ Y
Sbjct: 8 AVAAALELVDPPGCRNSMNANVSY 31
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAADP 93
AVAAALELVDPPGCRNS P
Sbjct: 95 AVAAALELVDPPGCRNSITGGP 116
>SB_42884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAADPF 96
AVAAALELVDPPGCRNS + F
Sbjct: 8 AVAAALELVDPPGCRNSIGQNGF 30
>SB_42734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAA 84
AVAAALELVDPPGCRNS A
Sbjct: 8 AVAAALELVDPPGCRNSIA 26
>SB_18671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAADPF 96
AVAAALELVDPPGCRNS ++PF
Sbjct: 8 AVAAALELVDPPGCRNS-MSNPF 29
>SB_36256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAA 87
AVAAALELVDPPGCRNS A
Sbjct: 8 AVAAALELVDPPGCRNSMVA 27
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAA 84
AVAAALELVDPPGCRNS A
Sbjct: 84 AVAAALELVDPPGCRNSIA 102
>SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAA 87
AVAAALELVDPPGCRNS A
Sbjct: 8 AVAAALELVDPPGCRNSIQA 27
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAADP 93
AVAAALELVDPPGCRNS P
Sbjct: 28 AVAAALELVDPPGCRNSMPDRP 49
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAADPFYICIYYFH 120
AVAAALELVDPPGCRNS + YI + H
Sbjct: 84 AVAAALELVDPPGCRNSMIYEN-YILLRKLH 113
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNSAAA 87
AVAAALELVDPPGCRNS ++
Sbjct: 652 AVAAALELVDPPGCRNSISS 671
>SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087)
Length = 171
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_55896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_54935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_51325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_44994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_43938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_42082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87)
Length = 209
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_39914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_35514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_30147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_29872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_26655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_25292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06)
Length = 183
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_21491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_16601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_15561| Best HMM Match : Protamine_P2 (HMM E-Value=8.8)
Length = 182
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 25 AVAAALELVDPPGCRNS 41
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 65 AVAAALELVDPPGCRNS 81
>SB_9600| Best HMM Match : DUF1596 (HMM E-Value=9.6)
Length = 205
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_8545| Best HMM Match : C2 (HMM E-Value=0.00073)
Length = 106
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_8047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4)
Length = 205
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_967| Best HMM Match : Calx-beta (HMM E-Value=2.8)
Length = 123
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_56708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 63 AVAAALELVDPPGCRNS 79
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 25 AVAAALELVDPPGCRNS 41
>SB_46352| Best HMM Match : L71 (HMM E-Value=0.19)
Length = 179
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_45526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_39283| Best HMM Match : ADK (HMM E-Value=3.7)
Length = 171
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_38562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 45 AVAAALELVDPPGCRNS 61
>SB_18780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 95 AVAAALELVDPPGCRNS 111
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 71 AVAAALELVDPPGCRNS 87
>SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 28 AVAAALELVDPPGCRNS 78
AVAAALELVDPPGCRNS
Sbjct: 8 AVAAALELVDPPGCRNS 24
>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = -1
Query: 395 TRKLSETFHQLTDVTLQRDPEKRHSASQLLNHAFFKQIRRADFLPGLIGRAKPIKPDPDY 216
T S+ F + + L +DP R +A +LL H F K ++ +L LI R K K +
Sbjct: 1028 TGNFSKAFKEFVSLCLNKDPNDRPTAKELLKHRFIKTAKKNAYLVELIERHKKWKQNNHD 1087
Query: 215 MTALSIQEQLSEMVIEKSTEWDF 147
S + + +WDF
Sbjct: 1088 DDDSSSGDDSDGDNDDNGMDWDF 1110
>SB_12642| Best HMM Match : Pkinase (HMM E-Value=5.3e-07)
Length = 253
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = -1
Query: 395 TRKLSETFHQLTDVTLQRDPEKRHSASQLLNHAFFKQIRRADFLPGLIGRAKPIKPDPDY 216
T S+ F + + L +DP R +A +LL H F K ++ +L LI R K K +
Sbjct: 94 TGNFSKAFKEFVSLCLNKDPNDRPTAKELLKHRFIKTAKKNAYLVELIERHKKWKQNNHD 153
Query: 215 MTALSIQEQLSEMVIEKSTEWDF 147
S + + +WDF
Sbjct: 154 DDDSSSGDDSDGDNDDNGMDWDF 176
>SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 33.5 bits (73), Expect = 0.087
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -1
Query: 350 LQRDPEKRHSASQLLNHAFFKQIRRADFLPGLIGRAKPIK 231
L +DP+KR SAS+LL H + K+ + A FL G R K K
Sbjct: 195 LDQDPDKRPSASRLLRHPYIKK-QIALFLEGTKNRQKQRK 233
>SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 870
Score = 31.1 bits (67), Expect = 0.46
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 389 KLSETFHQLTDVTLQRDPEKRHSASQLLNHAFFKQ 285
++S + + L+ DP +R + +QLLNH FFK+
Sbjct: 200 RISPMAVDMLKLCLKMDPSERPTCAQLLNHDFFKK 234
>SB_53349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 402 VRDEEAVGDLPPAHRRDAAEGPGKKTFGLSTPKPRVLQADPKSGLPART 256
V + E + P H A EGPGK +S+ K A +GLP R+
Sbjct: 28 VSEWETFSEEPTTHNITAIEGPGKTDHNISSEKYLETLAMCHNGLPVRS 76
>SB_27803| Best HMM Match : Pkinase (HMM E-Value=2.1e-08)
Length = 318
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 368 QLTDVTLQRDPEKRHSASQLLNHAFFKQIRRADFLPGLIGRAK 240
+L ++ DP++R SA Q L H +F+ +R + I +++
Sbjct: 165 ELIELLCTYDPDERISAKQALRHEYFRDLREIEKRAAAIAKSQ 207
>SB_31629| Best HMM Match : DEAD (HMM E-Value=1.2e-05)
Length = 415
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 46 ELVDPPGCRNS 78
ELVDPPGCRNS
Sbjct: 319 ELVDPPGCRNS 329
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 375 LPPAHRRDAAEGPGKKTFGLSTPKPRVLQADPKSGLPARTHRTRQAHQT 229
+PPA ++A+ P +FG + P +VL G P +RQ QT
Sbjct: 106 VPPASHPNSAQYPPSSSFGANMPSNQVLNGPSSRGTP--PPGSRQMDQT 152
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -3
Query: 354 DAAEGPGKKTFGLSTPKPRVLQADPKSGLPARTHRTRQAHQT*PRLHDGPLDPRTTLRD 178
D P KK S P ++++ ++GLP T + ++HQT P + + TL+D
Sbjct: 218 DCTNKPAKKMTPRSVSSPSMMESVNENGLPGSTFKL-ESHQTSPGERRRHVLRKMTLKD 275
>SB_45| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 851
Score = 29.1 bits (62), Expect = 1.9
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Frame = -1
Query: 350 LQRDPEKRHSASQLLNHAFF----KQIRR-ADFLPGLIGR---AKPIKPDPDYMTA--LS 201
L RDPE R SAS ++ H F K++R A F G R + IK + + L
Sbjct: 718 LARDPEDRPSASNMIGHPVFWSEDKKLRYIAAFYNGYDKRDSVRRKIKRELGTVPRWDLK 777
Query: 200 IQEQLSEMVIEKSTEWDF*FRYE-LNYL*K*YIHI*KGSAAAEFLQ 66
+ EQ +M+ K ++DF R E L ++ Y H K + LQ
Sbjct: 778 LTEQTKKMI--KERKYDFFSRMELLRFIRNGYQHFLKELFGCKLLQ 821
>SB_3739| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 490
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 389 KLSETFHQLTDVTLQRDPEKRHSASQLLNHAFFKQI 282
++S D L RDP R +A +LLNH F + +
Sbjct: 437 QISPRLQSFLDNALIRDPLYRATAFELLNHPFIRNV 472
>SB_29154| Best HMM Match : RNA_pol_Rpb2_7 (HMM E-Value=2.3)
Length = 416
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 286 CLKNAWFRS*EAECLFSGSLCSVTSVSWWKVSDSFLVAYTCRSRDTASALS 438
C K W RS ++ +C S S+ + D + V TC ++ S S
Sbjct: 52 CTKRLWGRSLSFNLMYKYMICDGDSKSYDSIWDQYGVCDTCNKYESMSRAS 102
>SB_19218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 25 PAVAAALELVDPPG 66
P VA ALELVDPPG
Sbjct: 52 PQVAPALELVDPPG 65
>SB_44471| Best HMM Match : TFIIF_beta (HMM E-Value=1.3)
Length = 670
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 286 CLKNAWFRS*EAECLFSGSLCSVTSVSWWKVSDSFLVAYTCRSRDTASALS 438
C K W RS ++ +C S S+ + D + V TC ++ S S
Sbjct: 306 CAKRLWGRSLSFNLMYKYMICDGDSKSYDSIWDQYGVCDTCNKLESMSRAS 356
>SB_27902| Best HMM Match : RNA_pol_Rpb2_7 (HMM E-Value=2.3)
Length = 493
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 286 CLKNAWFRS*EAECLFSGSLCSVTSVSWWKVSDSFLVAYTCRSRDTASALS 438
C K W RS ++ +C S S+ + D + V TC ++ S S
Sbjct: 307 CTKRLWGRSLSFNLMYKYMICDGDSKSYDSIWDQYGVCDTCNKYESMSRAS 357
>SB_46308| Best HMM Match : IMS (HMM E-Value=0)
Length = 1245
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 287 QIRRADFLPGLIGRAKPIKPDPDYMTALSIQEQ 189
+++R F P ++ A P +P Y+T QE+
Sbjct: 210 ELKRQGFKPAVLNMASPKRPGGGYLTGAGAQEE 242
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 303 PRVLQADPKSGLPARTHRTRQAHQT*PRLHDGPLDP 196
PRV + P++ LPA + RT T PR+H P P
Sbjct: 622 PRVHHS-PRTPLPAYSPRTTLPANTTPRVHHSPRTP 656
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 61 PGCRNSAAADPFYICIYYFHK*FNSYLN 144
PGCR AD + C+ +H+ +++N
Sbjct: 707 PGCRRPGVADLYGRCVECYHQCIKTFIN 734
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 27.5 bits (58), Expect = 5.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = -3
Query: 441 RRQRGRGVPAAAGVRDEEAVGDLP------PAHRRDAAEGPGKKTFGLSTPKPRVLQADP 280
RR G GV GV+ GD+P PAH + AEG G + + P+ + + DP
Sbjct: 193 RRMSGGGVEVG-GVQQPGRWGDMPLAQQMPPAHLPEWAEGVG---YFQNDPRANLNRIDP 248
Query: 279 KSG 271
+ G
Sbjct: 249 RDG 251
>SB_46641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = -2
Query: 181 RWLSRNRPNGIFNLDTXXXXXXXXXXXYKKXXXXXXXXXXXXPLVLERPPPR 26
RW RN P GIF++ K PLVLERPPPR
Sbjct: 37 RWRGRNYPEGIFSVFGFSGIIFMEGRFPK---LSSNSCSPGDPLVLERPPPR 85
>SB_47948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 428 DAVSRLRQVYATRKLSETFHQLTDVTLQRDPEKRHSASQLLNHAFFK 288
D + R + Y K+S T L L+ DP R + Q+L+ FFK
Sbjct: 247 DRIKR-NEYYIPSKVSHTAQLLIIKLLRPDPTTRPTMQQVLDDDFFK 292
>SB_1273| Best HMM Match : polyprenyl_synt (HMM E-Value=3.64338e-44)
Length = 303
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -1
Query: 446 GVGDSADAVSRLRQVYATRKLSETFHQLTDVTLQR--DPEKRHSASQLLNHAFFKQIRR 276
G+ D +A +++++VY L + FH+ + + QR D +HS L + F +R+
Sbjct: 241 GIND-IEASAKVKRVYRELNLEQVFHEYEEASYQRIIDLISKHS-GDLPDEVFLDFVRK 297
>SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)
Length = 808
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 461 YNTDSGVGDSADAVSRLRQVYATRKLSETFHQLTDVTLQRDPEK-RHSASQLLN 303
YN G+G + SR+ +A R+ ETF + PE HS ++ L+
Sbjct: 240 YNNVEGLGFNLVTESRVYNWFANRRKEETFRMKLAIEAANYPENPGHSPNRTLS 293
>SB_54290| Best HMM Match : Pkinase (HMM E-Value=1.3e-26)
Length = 239
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 386 LSETFHQLTDVTLQRDPEKRHSASQLLNHAFFKQIRRADFLP 261
L E L D L DP +R +A + L H F + + +P
Sbjct: 196 LPEDALDLFDAMLTLDPSQRITAEKALEHPFLTDVNPHNIIP 237
>SB_45328| Best HMM Match : DUF1162 (HMM E-Value=6.1e-09)
Length = 1508
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 371 HQLTDVTLQRDPEKRHSASQLLNHAFFKQIRRADFLPGLIGRAKP--IKP-DPDY 216
H ++ L D EK SASQ +H + + + +P + KP I+P DP Y
Sbjct: 309 HLEMNIELLCDDEKAASASQQYSHVMYIEPNSSSNVPLQLAHNKPLYIRPQDPRY 363
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 392 RKLSETFHQLTDVTLQRDPEKRHSASQLLNHAFFKQ 285
RK+++ L D L DP KR S +Q L H F +
Sbjct: 829 RKVNQ-LKDLLDKILMLDPSKRLSLNQALTHPFITE 863
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,345,171
Number of Sequences: 59808
Number of extensions: 238703
Number of successful extensions: 2423
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 2353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2423
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 945255773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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