Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1643
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 182 2e-46
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 182 2e-46
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 182 2e-46
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 182 2e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 182 2e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 182 2e-46
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 182 2e-46
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 175 1e-44
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 173 6e-44
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 99 3e-21
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 97 1e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 75 3e-14
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 63 2e-10
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 40 0.002
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 35 0.037
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.46
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.46
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.46
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 5.7
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 5.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 5.7
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 5.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 182 bits (442), Expect = 2e-46
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 279 SYNSIMKCDIDIRKDL 294
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 182 bits (442), Expect = 2e-46
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 279 SYNSIMKCDIDIRKDL 294
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 182 bits (442), Expect = 2e-46
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 279 SYNSIMKCDIDIRKDL 294
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 182 bits (442), Expect = 2e-46
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 279 SYNSIMKCDIDIRKDL 294
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 182 bits (442), Expect = 2e-46
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 279 SYNSIMKCDIDIRKDL 294
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 182 bits (442), Expect = 2e-46
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 279 SYNSIMKCDIDIRKDL 294
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 182 bits (442), Expect = 2e-46
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 248 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 307
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 308 TFQQMWISKQEYDESGPSIVHRKCF 332
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 235 SYNSIMKCDIDIRKDL 250
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 182 bits (442), Expect = 2e-46
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 278 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 338 TFQQMWISKQEYDESGPSIVHRKCF 362
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 265 SYNSIMKCDIDIRKDL 280
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 182 bits (442), Expect = 2e-46
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 279 SYNSIMKCDIDIRKDL 294
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 175 bits (427), Expect = 1e-44
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLS 350
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 351 TFQQMWISKQEYDESGPSIVHRKCF 375
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
+YNSIMKCD+DIRK L
Sbjct: 279 SYNSIMKCDIDIRKDL 294
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 173 bits (422), Expect = 6e-44
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 370
KDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 291 KDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLS 350
Query: 369 TFQQMWISKQEYDESGPSIVHRKCF 295
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 351 TFQQMWISKQEYDESGPSIVHRKCF 375
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1
Query: 589 TYNSIMKCDVDIRKGL 542
TY SIMKCDVDIRK L
Sbjct: 278 TYQSIMKCDVDIRKDL 293
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Frame = -2
Query: 543 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 373
L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 372 STFQQMWISKQEYDESGPSIVHRKC 298
TFQQMW+SK EYDESG SIV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 96.7 bits (230), Expect = 1e-20
Identities = 42/83 (50%), Positives = 60/83 (72%)
Frame = -2
Query: 543 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 364
LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 363 QQMWISKQEYDESGPSIVHRKCF 295
++MW+ K+EY++ G S +H++ F
Sbjct: 352 RKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 75.4 bits (177), Expect = 3e-14
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)
Frame = -2
Query: 546 DLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVW 400
D Y + VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V+
Sbjct: 296 DFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVF 355
Query: 399 IGGSILASL--STFQQMWISKQEYDESG 322
+GG++LA+L Q W+SK+EY+E G
Sbjct: 356 LGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 16/95 (16%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPE 418
+ LY N VLSGG+TM+ A ++Q+++ L+ P + +++I+
Sbjct: 320 RGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKM 379
Query: 417 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 313
++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 380 QRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 60.5 bits (140), Expect = 9e-10
Identities = 26/73 (35%), Positives = 48/73 (65%)
Frame = -2
Query: 555 SVKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 376
S + LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS
Sbjct: 467 SRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVAS 526
Query: 375 LSTFQQMWISKQE 337
STF+ IS Q+
Sbjct: 527 ASTFEDSCISLQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -2
Query: 543 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 373
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 372 STFQQMWISKQEYDESGPSIVHRKCF*T 289
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -2
Query: 543 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 373
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 372 STFQQMWISKQEYDESGPSIVHRKCF*T 289
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.037
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Frame = -2
Query: 549 KDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWI 397
K L+ N +L+GG + PG+ R+++EI + + KI +I E K + W+
Sbjct: 207 KKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWL 266
Query: 396 GGSILASL-STFQQMWISKQEY 334
G S+L SL T ++ ++ +E+
Sbjct: 267 GASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 328
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 339 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 238
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 328
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 420 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 259
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,114,814
Number of Sequences: 27780
Number of extensions: 241968
Number of successful extensions: 689
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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