Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1642
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    23   6.3  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    23   6.3  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    23   6.3  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    23   6.3  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.4  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 423 RKRQKKCVPFTRGRFLFPTYADSLERLCQRY 515
           RK     VPF R  F  P +A    R  Q+Y
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY 177


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 423 RKRQKKCVPFTRGRFLFPTYADSLERLCQRY 515
           RK     VPF R  F  P +A    R  Q+Y
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY 177


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 423 RKRQKKCVPFTRGRFLFPTYADSLERLCQRY 515
           RK     VPF R  F  P +A    R  Q+Y
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY 177


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 423 RKRQKKCVPFTRGRFLFPTYADSLERLCQRY 515
           RK     VPF R  F  P +A    R  Q+Y
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY 177


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 585 AALARVSVRNTSGLSPESSPTR 520
           A     S  +TSG S  SSPTR
Sbjct: 41  ACTTTTSTTSTSGASAASSPTR 62


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 585 AALARVSVRNTSGLSPESSPTR 520
           A     S  +TSG S  SSPTR
Sbjct: 41  ACTTTTSTTSTSGASAASSPTR 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,718
Number of Sequences: 2352
Number of extensions: 10569
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)