Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1640
(620 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 115 6e-27
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 81 1e-16
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 80 3e-16
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 61 1e-10
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 56 5e-09
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 42 7e-05
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 40 4e-04
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 36 0.004
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 32 0.058
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 5.1
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 5.1
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 5.1
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 6.7
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 115 bits (276), Expect = 6e-27
Identities = 56/99 (56%), Positives = 65/99 (65%)
Frame = +3
Query: 321 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 500
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
NFMIQ +SIYG RF DENFKL H G
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPG 119
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 81.0 bits (191), Expect = 1e-16
Identities = 46/92 (50%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 509
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 510 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 605
M+Q SIYGE+FEDENF+LKH
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKH 95
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 79.8 bits (188), Expect = 3e-16
Identities = 41/89 (46%), Positives = 47/89 (52%)
Frame = +3
Query: 351 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 530
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 531 XXXXXXXXRSIYGERFEDENFKLKHYGAG 617
+SIYGE+F DENF LKH G
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPG 94
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 61.3 bits (142), Expect = 1e-10
Identities = 41/96 (42%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Frame = +3
Query: 345 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 500
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLKH 605
+ FMIQ +I+ R F DENF LKH
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKH 100
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 55.6 bits (128), Expect = 5e-09
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 554
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQ-GGDPTGTGRGG 64
Query: 555 RSIYGERFEDE-NFKLKHYGAG 617
SIYG++F+DE + L H GAG
Sbjct: 65 TSIYGDKFDDEIHSDLHHTGAG 86
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 41.9 bits (94), Expect = 7e-05
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 381 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 560
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ-GGDPLGDGTGGES 519
Query: 561 IYGERFEDE-NFKLKH 605
I+ + FEDE + LKH
Sbjct: 520 IWKKDFEDEISPNLKH 535
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 39.5 bits (88), Expect = 4e-04
Identities = 29/69 (42%), Positives = 33/69 (47%)
Frame = +3
Query: 381 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 560
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 561 IYGERFEDE 587
IYGE F E
Sbjct: 78 IYGEPFAVE 86
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 36.3 bits (80), Expect = 0.004
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 554
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQ-GGDPSGTGRGG 338
Query: 555 RSIYGERFEDENFK-LKHYGAG 617
+SI+G+ F+DE LKH G
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRG 360
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 32.3 bits (70), Expect = 0.058
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 369 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 518
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQ 52
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 557 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 405
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 5.1
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 367 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 224
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 5.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 239 FSSFPCYFYKIRFECLFFQNLRY 171
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 6.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 195 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 347
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,459,934
Number of Sequences: 5004
Number of extensions: 48715
Number of successful extensions: 130
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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