Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1640
(620 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 109 1e-24
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 106 2e-23
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 100 2e-21
09_06_0359 + 22508900-22509439 87 8e-18
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 86 2e-17
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 81 7e-16
02_01_0160 + 1116160-1116678 77 9e-15
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 68 5e-12
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 68 7e-12
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 57 1e-08
10_01_0309 + 3417602-3418147 54 1e-07
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 53 2e-07
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 51 6e-07
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 49 3e-06
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 45 4e-05
06_01_0214 + 1634171-1634173,1634263-1634742 45 6e-05
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 44 7e-05
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 43 2e-04
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 33 0.18
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 29 3.0
10_01_0310 + 3425099-3425218 29 3.9
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 28 6.9
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 27 9.1
01_06_1547 - 38150814-38151488,38151608-38151666,38151774-381519... 27 9.1
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 109 bits (263), Expect = 1e-24
Identities = 57/115 (49%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Frame = +3
Query: 288 FIASAKSD--EIPKGPKVTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQ 452
F++SA +D E+ K+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCT 123
Query: 453 KPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
+G GYKGS FHRVIK+FMIQ +SIYG F+DENFKL H G G
Sbjct: 124 GEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPG 178
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 106 bits (254), Expect = 2e-23
Identities = 51/96 (53%), Positives = 61/96 (63%)
Frame = +3
Query: 330 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 509
KV K FD+++G + G IVIGLFG+ VPKT +NF L +G GYKG FHR+IK+F
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDF 122
Query: 510 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
MIQ RSIYGE F+DENF LKH G G
Sbjct: 123 MIQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPG 158
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 99.5 bits (237), Expect = 2e-21
Identities = 55/118 (46%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Frame = +3
Query: 285 LFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEG 464
L +A AK + +VTHKV FD++I G +V+GLFGKTVPKT ENF L +G
Sbjct: 34 LALAQAKKSKADL-TEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKG 92
Query: 465 EG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
G +KGS FHR+I +FMIQ SIYG +F DENFK+KH G G
Sbjct: 93 TGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPG 150
>09_06_0359 + 22508900-22509439
Length = 179
Score = 87.4 bits (207), Expect = 8e-18
Identities = 48/99 (48%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
KV FD+ IG G +V+ LF TVPKT ENF L +G G YKGS FHR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
NFM Q SIYG+RF DENFKL+H G G
Sbjct: 67 PNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPG 105
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 85.8 bits (203), Expect = 2e-17
Identities = 48/103 (46%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Frame = +3
Query: 330 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 488
KVT KV FD+ I G IV+GLFG TVPKT ENF + +G G YKG+ F
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPF 96
Query: 489 HRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
HR+I FMIQ SIYG F DENFK+ H G
Sbjct: 97 HRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPG 139
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 81.0 bits (191), Expect = 7e-16
Identities = 48/105 (45%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +3
Query: 318 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA---QKPEG--EGYKGS 482
P PK V FD+ IG G I + LF VPKT ENF Q + G +GYKG
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGC 89
Query: 483 KFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
+FHRVIK+FMIQ SIYG +F+DENF KH G G
Sbjct: 90 QFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPG 134
>02_01_0160 + 1116160-1116678
Length = 172
Score = 77.4 bits (182), Expect = 9e-15
Identities = 44/99 (44%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
+V FDM +G G IV+ L+ K VP+T ENF L +G G YKGS FHRVI
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
FM Q SIYGE+F DE FK KH G
Sbjct: 65 PEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPG 103
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 68.1 bits (159), Expect = 5e-12
Identities = 41/95 (43%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Frame = +3
Query: 345 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 500
V D+ IGD+ +V LF P+T ENF L G G YKGS FHRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 605
K FM Q SIYG FEDENF L+H
Sbjct: 69 KGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRH 103
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 67.7 bits (158), Expect = 7e-12
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Frame = +3
Query: 327 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSK 485
P VT++V D++I +IG IVIGL+G VPKT NF L EG G YKGS+
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 486 FHRVIKNFMIQ 518
FHR+I FMIQ
Sbjct: 94 FHRIIPGFMIQ 104
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 56.8 bits (131), Expect = 1e-08
Identities = 45/143 (31%), Positives = 57/143 (39%), Gaps = 22/143 (15%)
Frame = +3
Query: 255 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 434
GT T A +A+ K +E + D+ IG D G IV+ L+ P+T EN
Sbjct: 7 GTTTAAAAAA--VAAGKEEEAEVVVVRNPRCYLDVSIGGDMEGRIVVELYASVAPRTAEN 64
Query: 435 FFQLAQKPEGEGY----------------------KGSKFHRVIKNFMIQXXXXXXXXXX 548
F L +G KGS HR++K FM+Q
Sbjct: 65 FRALCTGEKGVSAATGVPLHYKISLKAASVCTRWTKGSCIHRIVKGFMVQGGDITAGDGT 124
Query: 549 XXRSIYGERFEDENFKLKHYGAG 617
SIYG FEDENF LKH G
Sbjct: 125 GGESIYGLNFEDENFVLKHERKG 147
>10_01_0309 + 3417602-3418147
Length = 181
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/106 (34%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Frame = +3
Query: 330 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKF 488
K +V D+ IG + +G +VI L VP T ENF +L ++ G YKGS F
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 489 HRVIKNFMIQXXXXXXXXXXXXRSIY---GERFEDENFKLKHYGAG 617
HRV+ FM Q S F DE F +KH G G
Sbjct: 68 HRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPG 113
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 369 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 548
+ ++G I ++ K PKT NF +L+++ Y FHR+IK+F++Q
Sbjct: 15 ETSMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQ-GGDPTGTGR 70
Query: 549 XXRSIYGERFEDE-NFKLKHYGAG 617
SIYG +FEDE +LKH GAG
Sbjct: 71 GGESIYGAKFEDEIRPELKHTGAG 94
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = +3
Query: 474 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
+GS FHRVIK FM+Q SIYG +FEDENF LKH G
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKG 165
Score = 36.7 bits (81), Expect = 0.015
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 291 IASAKSDEIP-KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 467
+ASA + E+ K P+ D+ IG + G IVI L+ VP+T ENF L +G
Sbjct: 13 VASAAAAEVEVKNPRCF----MDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGV 68
Query: 468 GYKGSKFHRVIKNF 509
G K H K+F
Sbjct: 69 GAVTGK-HLHYKDF 81
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +3
Query: 315 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------- 470
+PK K H V FD+ IG I LF VPKTTENF L G G
Sbjct: 1 MPKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLY 59
Query: 471 YKGSKFHRVIKNFMIQ 518
+KG+ HR++K FM Q
Sbjct: 60 FKGTNMHRILKGFMAQ 75
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 45.2 bits (102), Expect = 4e-05
Identities = 38/103 (36%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +3
Query: 312 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 491
++ K PK V GD N+ L P+T ENF E Y G FH
Sbjct: 336 KVEKNPKKKGYVQLHTTHGDLNLE-----LHCDITPRTCENFLTHC---ENGYYNGLIFH 387
Query: 492 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAG 617
R IKNFMIQ SI+G+ F+DE N KL H G G
Sbjct: 388 RSIKNFMIQ-GGDPTGTGSGGESIWGKPFKDELNSKLIHSGRG 429
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 44.8 bits (101), Expect = 6e-05
Identities = 31/82 (37%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 554
N+G I +F P+T ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQ-GGDPTGTGKGG 63
Query: 555 RSIYGERFEDE-NFKLKHYGAG 617
SI+G++F DE LKH G
Sbjct: 64 TSIWGKKFADEFRESLKHNARG 85
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 44.4 bits (100), Expect = 7e-05
Identities = 29/69 (42%), Positives = 35/69 (50%)
Frame = +3
Query: 381 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 560
G + I L+ K PK NF QL EG Y G+ FHRVIK+F++Q S
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQ-GGDPTGSGTGGES 77
Query: 561 IYGERFEDE 587
IYG F DE
Sbjct: 78 IYGAPFADE 86
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 554
++G I + L+ + PKT ENF + Y FHRVIK FMIQ
Sbjct: 503 SMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQ-TGDPLGDGTGG 558
Query: 555 RSIYGERFEDENFK-LKH 605
+SI+G FEDE K L+H
Sbjct: 559 QSIWGREFEDEFHKSLRH 576
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 518
++G I + L P TT+NF +L + + Y G FH+V K+F+ Q
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQ 52
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 590 VFIFKTFTIYTAPSSSITLGKITTLDHEIFN---YSVELAPFVPLPLRFLS 447
V + TI A + S+ T LD ++FN +++ PFVPL L+ L+
Sbjct: 132 VVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIPFVPLLLKALN 182
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 381 GTIVIGLFGKTVPKTTENF 437
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 381 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 518
G+I I ++ + F L + +KG F VIKNF+IQ
Sbjct: 103 GSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQ 145
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 381 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 518
G I G F PKT E+ ++L + Y + F RV K F+ Q
Sbjct: 84 GDIEFGFFPHVAPKTVEHIYKLVRL---GCYNTNHFFRVDKGFVAQ 126
>01_06_1547 -
38150814-38151488,38151608-38151666,38151774-38151919,
38152078-38152274,38152542-38152920,38153000-38153031
Length = 495
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +3
Query: 255 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 434
G + L ILL+I S KSD K V H + IGDD + +I L K V T+ N
Sbjct: 349 GEPQLELLILLYIISLKSDAYDKLASVAHDL-----IGDDEVDSISSVL--KVVRVTSSN 401
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,879,983
Number of Sequences: 37544
Number of extensions: 271465
Number of successful extensions: 452
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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